EWM25907.1, cds4761 (CDS) Nannochloropsis gaditana

Overview
NameEWM25907.1
Unique Namecds4761
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:316306..316461 -
Alignment locationCM002464.1:315309..316205 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25907.1
Productperiplasmic binding protein
Orig transcript idgnl|cribi|Naga_100048g9.10279.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:316306..316461 -
CM002464.1supercontigCM002464.1:315309..316205 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR002491ABC_transptr_periplasmic_BD
Homology
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|585107776|gb|EWM25907.1| (periplasmic binding protein [Nannochloropsis gaditana])

HSP 1 Score: 712.99 bits (1839), Expect = 0.000e+0
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
Query:    1 MTECSVASAAASADTRPLRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHVPVEGEGGGREAEETGERSTREEA 350
            MTECSVASAAASADTRPLRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHVPVEGEGGGREAEETGERSTREEA
Sbjct:    1 MTECSVASAAASADTRPLRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHVPVEGEGGGREAEETGERSTREEA 350          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|1119936237|ref|WP_072817977.1| (cobalamin-binding protein [Bradyrhizobium erythrophlei] >gi|1109650555|emb|SHN72543.1| iron complex transport system substrate-binding protein [Bradyrhizobium erythrophlei])

HSP 1 Score: 317.005 bits (811), Expect = 5.000e-104
Identity = 155/306 (50.65%), Postives = 211/306 (68.95%), Query Frame = 0
Query:   19 RIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAF 324
            RI SFLP+ATEM  +LGL D ++GITHECDYPP+   KPVVV  VL +E +S  EID AV+ RL+ G+SLY V E  ++  AP L++TQ+LCQVC PSGNE++Q+L +L   P+++W TPK+ E++ +   ELG+ TG+ E ++  +   + R+A I    +  V       R RV  +EW+DP++  GHWV EM+  AGG D   R+G DSVRI W++V+ W PEV+IV PCGFDLEK+ ++A+ L    G+  LPA +   VYAVDAN YFARPG R+++G  LLAHL+H P+ F W GPA+AF
Sbjct:    6 RIVSFLPSATEMACALGLSDQLLGITHECDYPPQIMGKPVVVRNVLPIESMSQAEIDVAVTQRLRDGQSLYRVEEALMQDIAPDLILTQDLCQVCAPSGNEISQLLTSLPSKPQVLWLTPKSLEQIFDNLRELGEATGRSEMAETLIADGQARLAKIESVTRALV------SRPRVFCMEWMDPVYCCGHWVPEMVRMAGGLDKLGREGADSVRIRWDDVLEWKPEVLIVMPCGFDLEKTFKEAQRLTAYPGWDDLPAVRNGCVYAVDANSYFARPGPRVIEGTELLAHLLH-PELFEWRGPANAF 304          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|1160706454|ref|WP_079566386.1| (cobalamin-binding protein [Bradyrhizobium erythrophlei] >gi|1109609264|emb|SHG48566.1| iron complex transport system substrate-binding protein [Bradyrhizobium erythrophlei])

HSP 1 Score: 312.768 bits (800), Expect = 2.607e-102
Identity = 159/306 (51.96%), Postives = 207/306 (67.65%), Query Frame = 0
Query:   19 RIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAF 324
            RI SFLP+ATEM+ +LGLGD ++G+THECDYPPE   K VVV  VL +E +S  EID AV+ RL+ G SLY V+E  +R  AP L++TQ LCQVC PSGNEV+Q+LK L   P+I+W TPK+ E++ +   +LG+ TG+   ++  +   R R+  I      +   +    R RV  +EW+DP++  GHWV EM+  AGG D   R+G DSVRIPW++V+ W PEV+IV PCGF LEK+ +QAR+L    G+  LPA    RVYAVDAN YFARPG R+V+G  LLAHL+H P  F W GP  AF
Sbjct:    6 RIVSFLPSATEMVCALGLGDRLLGVTHECDYPPEIAGKTVVVRNVLPIETMSQPEIDSAVTQRLRDGLSLYRVDETLMREIAPDLILTQELCQVCAPSGNEVSQLLKVLPSQPQILWLTPKSLEQIFDNLRDLGEATGRSHIAENLIAEGRARLEKI------EAAARAAPSRPRVFCMEWMDPVYCCGHWVPEMVRIAGGIDGLGREGTDSVRIPWQDVLQWKPEVLIVMPCGFGLEKAADQARMLASYPGWADLPAVGDGRVYAVDANAYFARPGPRVVEGTELLAHLLH-PGLFEWKGPPGAF 304          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|1101078204|gb|OIO38651.1| (hypothetical protein AUJ72_02145 [Candidatus Omnitrophica bacterium CG1_02_46_14])

HSP 1 Score: 311.227 bits (796), Expect = 8.453e-102
Identity = 152/307 (49.51%), Postives = 213/307 (69.38%), Query Frame = 0
Query:   18 LRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAF 324
            +RI SFLP+ATE++ SLGL D +VGITHEC+YPPEA+ KP+VV   + +EG++ +EIDE VS  L+SG +LY VNE  LR   P +++TQ+LCQVC PSGNE++ VLK+L   P+I+  TPK    + E  L +G   GK + +   +E  + RV  +R       + +  + + RV  +EW DP++ GGHW+ E+ E AGG D  +R+GRDSVRI W EV  WAPEV+I+SPCG++++ + ++A+ L +   ++ LPA K ++VYAVDA  YFARPG R+VDGL LLAHLIH P+ F W GP +A+
Sbjct:    1 MRIVSFLPSATEIVCSLGLADELVGITHECNYPPEAQGKPIVVRNEIKMEGMTDREIDETVSRVLRSGGTLYRVNESLLRELDPDIIMTQDLCQVCAPSGNEISVVLKSLPRKPQILRLTPKNLSGIFENILTVGTAAGKTDVANKNIEVLKVRVEFVRN------EAKKIRKKPRVFLMEWFDPLYCGGHWIQELTEIAGGCDALARQGRDSVRISWREVKDWAPEVLILSPCGYNVKDAVKRAKDLPREPVWNELPAVKMNQVYAVDAQSYFARPGPRIVDGLELLAHLIH-PEEFDWQGPQNAY 300          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|1088854513|emb|SDY87197.1| (iron complex transport system substrate-binding protein [Nitrosomonas sp. Nm33])

HSP 1 Score: 305.449 bits (781), Expect = 9.764e-99
Identity = 151/318 (47.48%), Postives = 208/318 (65.41%), Query Frame = 0
Query:   19 RIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQ---------ARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHV 327
            RI SFLP+ATEM+ +LGL D++VGITHEC+YP   K+KP+VV  VL +E +S  EID AV+ RL+ G+SLY ++EE L + AP L++TQNLCQVC PSGNEV+QVLK L   P+I+W TP++  E+ ++  +L    G+ E+ +  +   R R+  ++ K            R RV  +EW+DP++A GHWV EM++ AGG D     G +SVR+ WE +  WAPEV+++ PCGF+L+++ +Q         +     R  F  LPA + +RV+AVDAN +FARPG R+VDG  LLAHL H P  F W GP DAF  V
Sbjct:    3 RIVSFLPSATEMVCALGLSDSLVGITHECNYPELVKRKPIVVRNVLPVETMSQSEIDRAVAERLRDGQSLYQIDEELLASLAPDLILTQNLCQVCAPSGNEVSQVLKALPHEPQILWMTPQSLSEIFDSLRDLDAAVGQTEKVEELIADCRARLEKLKSKTSRLA------YRPRVFCMEWLDPVYACGHWVPEMVKIAGGMDEIGSDGGESVRVAWERLAEWAPEVLVMMPCGFNLQQTMKQIWQHFGPYSSFAAENRAAFFNLPAVRDNRVFAVDANSFFARPGPRVVDGTELLAHLFH-PNEFSWDGPTDAFQQV 313          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|952340500|gb|KRT62957.1| (periplasmic binding protein, iron complex transport system substrate-binding protein [Candidatus Dadabacteria bacterium CSP1-2])

HSP 1 Score: 280.026 bits (715), Expect = 1.789e-89
Identity = 135/310 (43.55%), Postives = 205/310 (66.13%), Query Frame = 0
Query:   18 LRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHV 327
            +RI SFLP+ATE++++LGLGDN+VG+THECDYPPEA+ KP V+  ++N E L+  EID+AVS   K+GKS Y V+ E LR   P +++TQ LC VC  SGNEV +V+K L   P+I+   P T +E+L   L +G+ T ++E+S+  V   R R+A I+  +  +      K R RV  +EW+DP +  GHWV EM+  AGG+    + G+ S ++ W+E+  +AP+VI++ PCGF++E++  +  +L   E +H +PA +   VY VDAN YF+RPG R++DGL +LA ++H P+   +  P D+  ++
Sbjct:    1 MRICSFLPSATEIVYALGLGDNLVGVTHECDYPPEARSKPRVIASLINPEDLTSYEIDKAVSENYKAGKSTYIVDVETLRRTNPDIIITQGLCDVCAVSGNEVKEVVKVLGHKPQIISLEPNTLDEILNTILLVGEATERKEQSEYLVNNLRSRIAAIKSLLGEE------KDRPRVFCMEWLDPPYVAGHWVPEMVRIAGGDYGFGKVGKPSFKVSWDEIFDFAPQVIVLMPCGFNIERTLREVEILTSNEYWHRIPAVRKGHVYLVDANSYFSRPGPRILDGLKILARILH-PELCSFEIPPDSVLNL 303          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|374852949|dbj|BAL55870.1| (periplasmic solute binding protein [uncultured Acetothermia bacterium] >gi|374854221|dbj|BAL57109.1| periplasmic solute binding protein [uncultured Acetothermia bacterium] >gi|374855963|dbj|BAL58818.1| periplasmic binding protein [Candidatus Acetothermus autotrophicum])

HSP 1 Score: 251.906 bits (642), Expect = 1.834e-78
Identity = 126/307 (41.04%), Postives = 196/307 (63.84%), Query Frame = 0
Query:   18 LRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAF 324
            ++I S LP+ATE+++ LGLGD +VG++H+CD+PP+  KKP + + V++ E +   EID  V  RL SG S+Y+++ E L+   P L++TQ LC+VC PS ++V Q +K L   P+IV   P T E++L+  L +G+ TG+E+ ++  V   R+R+  IR K +          R RV  +EW++PI  GGHWV +M+E+AGGED     G+ S    WEE++ + PE+I++ PCGF +E++  +  +L +  G+  L A K  +V+ V+A+ YF RPG R+V GL +LA +IH P+ F    P D+F
Sbjct:    1 MKIISLLPSATEIVYELGLGDCLVGVSHDCDWPPDVLKKPKLSQAVVHSE-MPSAEIDAIVRERLHSGLSVYHIDAELLQKLNPDLILTQELCEVCAPSFDDVRQAVKLLHGQPKIVSLEPHTIEDILDNILTVGEVTGREDRARTLVAQLRRRIERIRAKTETLAH------RPRVCCIEWLEPIMIGGHWVPQMVEYAGGEDWLGELGQPSRYADWEEILHYNPEIIVLMPCGFSIERTLREMDVLTELAGWEELTAVKEGQVFIVEASAYFNRPGPRIVTGLEILAEIIH-PEIFSELAPRDSF 299          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|374852873|dbj|BAL55796.1| (periplasmic solute binding protein [uncultured Acetothermia bacterium])

HSP 1 Score: 251.521 bits (641), Expect = 2.708e-78
Identity = 126/307 (41.04%), Postives = 196/307 (63.84%), Query Frame = 0
Query:   18 LRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAF 324
            ++I S LP+ATE+++ LGLGD +VG++H+CD+PP+  KKP + + V++ E +   EID  V  RL SG S+Y+++ E L+   P L++TQ LC+VC PS ++V Q +K L   P+IV   P T E++L+  L +G+ TG+E+ ++  V   R+R+  IR K +          R RV  +EW++PI  GGHWV +M+E+AGGED     G+ S    WEE++ + PE+I++ PCGF +E++  +  +L +  G+  L A K  +V+ V+A+ YF RPG R+V GL +LA +IH P+ F    P D+F
Sbjct:    1 MKIISLLPSATEIVYELGLGDCLVGVSHDCDWPPDVFKKPKLSQAVVHSE-MPSAEIDAIVRERLHSGLSVYHIDAELLQKLNPDLILTQELCEVCAPSFDDVRQAVKLLHGQPKIVSLEPHTIEDILDNILTVGEVTGREDRARTLVAQLRRRIERIRAKTETLAH------RPRVCCIEWLEPIMIGGHWVPQMVEYAGGEDWLGELGQPSRYADWEEILHYNPEIIVLMPCGFSIERTLREMDVLTELAGWEELTAVKEGQVFIVEASAYFNRPGPRIVTGLEILAEIIH-PEIFSELAPRDSF 299          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|1125331542|gb|OLC72603.1| (hypothetical protein AUH87_01295, partial [Deltaproteobacteria bacterium 13_1_40CM_4_54_4])

HSP 1 Score: 248.054 bits (632), Expect = 1.630e-77
Identity = 122/278 (43.88%), Postives = 179/278 (64.39%), Query Frame = 0
Query:   18 LRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPG 295
            +RI S LP+ATE+ F+LGLGD+VVG+THECDYP EA++KP+VV  +++   +S  EID  VS RL+   SLY ++E K R AAP L++TQ LC+VC    NEV    K+LK P  I+  +P    +VL     +G  T + + ++A V+ S +R+  +R     Q   Q N  R RVA +EW DP++A GHWV EM+E AGG DV  R+   S R+ W +V+   PE+I++ PCGF+L ++ +++ +L +  G++ LPA K   VY V+ + +F+RPG
Sbjct:    1 MRICSLLPSATEIAFALGLGDDVVGVTHECDYPHEARQKPIVVRSLIDANPMSSAEIDGWVSERLRGNLSLYGIDEVKFREAAPDLILTQELCEVCAVDYNEVAAAAKSLKEPATILALSPHCLTDVLRDIERVGAVTARADAARALVQRSHERIERVR-----QTAAQSNT-RPRVACLEWFDPVYAAGHWVPEMVELAGGFDVLGRREEPSARVEWTQVLDSVPEIIVLMPCGFELRRTIQESAVLQKLPGWNHLPAVKNGHVYGVNGSAFFSRPG 272          
BLAST of EWM25907.1 vs. NCBI_GenBank
Match: gi|1083128742|gb|OGE24557.1| (hypothetical protein A3J42_10440 [Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21])

HSP 1 Score: 249.595 bits (636), Expect = 1.744e-77
Identity = 121/310 (39.03%), Postives = 192/310 (61.94%), Query Frame = 0
Query:   18 LRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHV 327
            +RI SFLP+ TE+L+ LGLG++V G+THECDYPPEA++K  V+   ++   LS +EIDE VS     GKS Y ++++ L+ A P L++TQ LCQVC  SGNEVT+ ++ L   P I+   P+T  E+++  L +G+ TG  + ++   +   +R+  +R  +  + D      R RV  +EW+DP +  GHWV EM+E AGG     + G  S ++ W+E+  +AP+++ + PCG+D+EK+  +   + + + + +LP+    ++Y  DAN YF+RPG R+VDGL +LA  IH      +  P DA  ++
Sbjct:    1 MRICSFLPSTTEILYDLGLGNSVTGVTHECDYPPEAREKKRVIMSFIDPGKLSSREIDELVSRNAAEGKSTYLIDKDALKEADPDLILTQELCQVCAVSGNEVTEAVEALGKKPRIISLEPRTLSEIIDTILIIGEATGTGDRAREITDKLVERIERVRSLLGNERD------RPRVFCMEWLDPPYVAGHWVPEMVEIAGGSCGIGKAGEPSFKVSWKEIADFAPQMLFIMPCGYDVEKTLCEIETVTKHDEWFSLPSTSKGQIYIFDANSYFSRPGPRVVDGLEILAKTIHPESMKSYEPPPDAVVNL 304          
The following BLAST results are available for this feature:
BLAST of EWM25907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107776|gb|EWM25907.1|0.000e+0100.00periplasmic binding protein [Nannochloropsis gadit... [more]
gi|1119936237|ref|WP_072817977.1|5.000e-10450.65cobalamin-binding protein [Bradyrhizobium erythrop... [more]
gi|1160706454|ref|WP_079566386.1|2.607e-10251.96cobalamin-binding protein [Bradyrhizobium erythrop... [more]
gi|1101078204|gb|OIO38651.1|8.453e-10249.51hypothetical protein AUJ72_02145 [Candidatus Omnit... [more]
gi|1088854513|emb|SDY87197.1|9.764e-9947.48iron complex transport system substrate-binding pr... [more]
gi|952340500|gb|KRT62957.1|1.789e-8943.55periplasmic binding protein, iron complex transpor... [more]
gi|374852949|dbj|BAL55870.1|1.834e-7841.04periplasmic solute binding protein [uncultured Ace... [more]
gi|374852873|dbj|BAL55796.1|2.708e-7841.04periplasmic solute binding protein [uncultured Ace... [more]
gi|1125331542|gb|OLC72603.1|1.630e-7743.88hypothetical protein AUH87_01295, partial [Deltapr... [more]
gi|1083128742|gb|OGE24557.1|1.744e-7739.03hypothetical protein A3J42_10440 [Candidatus Dadab... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4773rna4773Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications