EWM25927.1, cds4751 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|585107798|gb|EWM25927.1| (NUDIX hydrolase domain-like protein [Nannochloropsis gaditana]) HSP 1 Score: 479.174 bits (1232), Expect = 5.075e-171 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query: 1 MRAGRAAGSIRRGTSFFGVVLTMLVGTAILPRVLGFVAGLPRHQVSRVIAASIASAGPRIYEEGQDPKELFELFEPPTAAEIAGAKVERLRPLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGMERGDQM 236
MRAGRAAGSIRRGTSFFGVVLTMLVGTAILPRVLGFVAGLPRHQVSRVIAASIASAGPRIYEEGQDPKELFELFEPPTAAEIAGAKVERLRPLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGMERGDQM
Sbjct: 1 MRAGRAAGSIRRGTSFFGVVLTMLVGTAILPRVLGFVAGLPRHQVSRVIAASIASAGPRIYEEGQDPKELFELFEPPTAAEIAGAKVERLRPLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGMERGDQM 236
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|551665604|ref|XP_005835564.1| (hypothetical protein GUITHDRAFT_151788 [Guillardia theta CCMP2712] >gi|428179714|gb|EKX48584.1| hypothetical protein GUITHDRAFT_151788 [Guillardia theta CCMP2712]) HSP 1 Score: 143.28 bits (360), Expect = 2.070e-38 Identity = 79/193 (40.93%), Postives = 119/193 (61.66%), Query Frame = 0
Query: 40 LPRHQVSRVIAASIASA----GPRIYEEGQDPKELFELFEPPTAAEIAGAKVERLRPLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVS 228
+P H V+ + ++ SA + GQD ELF++++PP++ I G + E R G + R LVH +GDWHRA+HIWL D G L++Q+RS+ KDTFPG+WDVS GH+ +GD+ TA++E +EELGL+ ++E L T+A + G + G F+C E++D FLL+ E + ++ P EV VS
Sbjct: 23 IPIHLVASKSSVTLRSAFRTRALSMAAPGQDLSELFDVYKPPSS--IPGFRGEPERA-GISRQRKLVHTQGDWHRAIHIWLYDGQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKESKEELGLDIK-KEELEYLGTIATSMAGSSPITGDFLCNEYKDIFLLKY--EGHLDDLKFAPEEVQAVS 209
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|397598936|gb|EJK57316.1| (hypothetical protein THAOC_22652 [Thalassiosira oceanica]) HSP 1 Score: 128.642 bits (322), Expect = 1.671e-30 Identity = 81/205 (39.51%), Postives = 108/205 (52.68%), Query Frame = 0
Query: 51 ASIASAGPRIYEEGQDPKELFELFEPPTAAEIAGAKVE-----RLRPLGR----RKARSLVHAEGDWHRAVHIWLTD----DHGR----LLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVE-------KLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGME 231
A++A AG + QD ELF+L+ P E+ A V P R K R LVH +GDWHR+VH+WL D G+ +LLQRRS +KDT P DVSC GH++AG + TA REL+EELG + + E K+ T+ + +G TE+ G F+CRE+QD FLL + + P EVSG E
Sbjct: 33 ATVAMAGSN-FHLAQDSNELFDLYLTPPDKELHNAVVTPAWGMEFNPPKRIDRSPKERGLVHRDGDWHRSVHVWLAQTTNGDRGKTSCKVLLQRRSPYKDTHPNLLDVSCAGHVDAGSDTVETATRELQEELGGNGIMQDRYEAEDVRRSKVCTVTSSIQGQTEKFGRFLCREYQDVFLLWWPSDEAFAPGLFSPQTEEEVSGFE 236
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|831791520|ref|XP_012759740.1| (hypothetical protein SAMD00019534_033940 [Acytostelium subglobosum LB1] >gi|735994530|dbj|GAM20219.1| hypothetical protein SAMD00019534_033940 [Acytostelium subglobosum LB1]) HSP 1 Score: 119.398 bits (298), Expect = 5.554e-30 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 0
Query: 92 PLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEV 227
P G RS +HA+G WHR VH+WL DD G LL+Q+R+ K++ P WD+S GH EAG S TAV+EL EELG++ A ++E L+T C V ++G +I E D +LLRV D+TR++ EV +
Sbjct: 15 PAGYSLPRSEIHAKGLWHRVVHVWLIDDKGNLLIQQRADNKESHPSLWDISTAGHCEAGMNSRDTAVKELSEELGMQLASADELEYLFT--CRTNHVL-KNGLYIDNELADVYLLRVASPIDLTRFKLQVEEVQAI 147
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|1013937011|gb|KYQ90709.1| (hypothetical protein DLAC_09344 [Dictyostelium lacteum]) HSP 1 Score: 115.161 bits (287), Expect = 3.501e-28 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0
Query: 93 LGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEV 227
LG + RS+VH++G WHR VH+W+ D G+LL+QRRS K++FPG WD S GHIEAG S A+REL EELG + V L L N+ R G ++ E D +L+ D+++ EVS+V
Sbjct: 17 LGYSEPRSVVHSKGLWHRVVHVWIVDSDGKLLIQRRSNNKESFPGYWDNSSAGHIEAGQTSKDAAIRELNEELG----ILHSVNDLELLFTYNKQYVLRSGKYLDNEIADVYLITYTFPFDLSKLTLQVEEVSDV 147
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|255087712|ref|XP_002505779.1| (predicted protein [Micromonas commoda] >gi|226521049|gb|ACO67037.1| predicted protein [Micromonas commoda]) HSP 1 Score: 112.464 bits (280), Expect = 4.352e-27 Identity = 74/181 (40.88%), Postives = 93/181 (51.38%), Query Frame = 0
Query: 53 IASAGPRIYEEGQDPKELFELFEPPTAAEIAGAKVERLRPL--GRRKARSLVHAEGDWHRAVHIWLTDDHGRLL-LQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGM 230
+ S P E Q E+F++ PPTA G V + RP+ G K R +VH WHR+VH+WL D L+ LQ+RS KDTFP RWD+S GHI +GD S PTAVREL EELG V E L L + G C F+D ++LR E + EVS V+ M
Sbjct: 1 MTSRNPNALAEAQSSSEMFDVMCPPTA----GFDVYKDRPVPTGESKTRGVVHQRKIWHRSVHVWLVDPKRSLVALQKRSPNKDTFPNRWDISAAGHIGSGDESRPTAVRELAEELG----VICVEEDLDFLGTVPAEQADLGG---CNCFEDMYVLRCDSES--IAFAVGEAEVSAVAWM 168
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|1083005866|gb|OGD08971.1| (hypothetical protein A2397_05755 [Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23]) HSP 1 Score: 109.768 bits (273), Expect = 2.947e-26 Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0
Query: 94 GRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVS--GMERGDQM 236
G +K +S VH +GDWHR+VH+WL + ++L+Q+R+ K FP WD+S GH+ AG+ S +A+RE +EELGL + L L R + G+ I E QD FL V K+ ++ R EVSE+ G+++ QM
Sbjct: 15 GVKKLKSDVHKQGDWHRSVHVWLMNSQNQILIQKRAPGKAAFPNHWDISSAGHVVAGEDSLTSALRETQEELGL----TLNPQDLIYLFTNTRSLVLNSGSLIENEIQDVFL--VKKDVKLSDLRLQKKEVSEIKFVGLKKLKQM 153
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|818855061|gb|KKU92269.1| (Nudix hydrolase 3 [Microgenomates group bacterium GW2011_GWA1_48_10]) HSP 1 Score: 110.153 bits (274), Expect = 3.054e-26 Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 0
Query: 80 AEIAGAKVERLRPLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGME 231
AE E GR K + VH++GDWHRA H+W+ + G+LL+Q+RS KD++P WD+S G + AG+ + A+RE+EEELG++ Q+EKL+T + G + EF D FL + M ++ E++EV ++
Sbjct: 2 AEFLDVLDENGNSTGRTKLKQQVHSDGDWHRAAHVWIVNSKGQLLIQKRSANKDSYPNMWDISAAGRVSAGEDTVTAAIREIEEELGIKVS-PKQLEKLFTAKSKD---VLNDGKYFNNEFDDVFLAHIDLNPSMINFQ--KSEIAEVKYID 147
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|330794520|ref|XP_003285326.1| (hypothetical protein DICPUDRAFT_46012 [Dictyostelium purpureum] >gi|325084690|gb|EGC38112.1| hypothetical protein DICPUDRAFT_46012 [Dictyostelium purpureum]) HSP 1 Score: 108.612 bits (270), Expect = 1.160e-25 Identity = 58/140 (41.43%), Postives = 83/140 (59.29%), Query Frame = 0
Query: 88 ERLRPLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLY-TLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSE 226
E+ LG R+ +H +G +HR VH+W+ D +G +L+Q+R+ KD++P WD SC GHIEAG S TAV+EL EELGL +++E L+ TL C G FI E D +L+ +GK D+ + + EVSE
Sbjct: 10 EKGNQLGYSLPRAEIHQKGLYHRVVHVWIVDSNGMVLIQKRTASKDSYPSMWDKSCAGHIEAGMGSKETAVKELSEELGLLFS-ENRLELLFSTLQCN----ILNEGKFIDNEISDVYLITLGKPFDLQKLKLQVEEVSE 144
BLAST of EWM25927.1 vs. NCBI_GenBank
Match: gi|1160569437|ref|XP_020437973.1| (hypothetical protein PPL_01099 [Polysphondylium pallidum PN500] >gi|281211705|gb|EFA85867.1| hypothetical protein PPL_01099 [Polysphondylium pallidum PN500]) HSP 1 Score: 106.686 bits (265), Expect = 4.640e-25 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 0
Query: 92 PLGRRKARSLVHAEGDWHRAVHIWLTDDHGRLLLQRRSKFKDTFPGRWDVSCGGHIEAGDASFPTAVRELEEELGLEEPVASQVEKLYTLACTNRGVTERHGAFICREFQDFFLLRVGKEHDMTRYRYPPGEVSEVSGM 230
P G RS +H++G WHR VH+WL D G LL+Q+RS K++F WD+SC GHIEAG S TA++EL+EELGL AS++E L+T E D +L K +++ ++ EV + +
Sbjct: 14 PAGYSLPRSEIHSKGMWHRVVHVWLVDTEGNLLIQQRSANKESFASYWDISCAGHIEAGMNSIDTAIKELDEELGLHITDASKLEYLFTY----------------NELADVYLYTFSKHMELSEFKLQEEEVQALKWL 136 The following BLAST results are available for this feature:
BLAST of EWM25927.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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