EWM25936.1, cds4750 (CDS) Nannochloropsis gaditana

Overview
NameEWM25936.1
Unique Namecds4750
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:280969..281259 -
Alignment locationCM002464.1:280542..280766 -
Alignment locationCM002464.1:280300..280449 -
Alignment locationCM002464.1:280075..280080 -

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Properties
Property NameValue
Protein idEWM25936.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100134g15.9895.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:280969..281259 -
CM002464.1supercontigCM002464.1:280542..280766 -
CM002464.1supercontigCM002464.1:280300..280449 -
CM002464.1supercontigCM002464.1:280075..280080 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25936.1 vs. NCBI_GenBank
Match: gi|585107807|gb|EWM25936.1| (hypothetical protein Naga_100134g15 [Nannochloropsis gaditana])

HSP 1 Score: 455.677 bits (1171), Expect = 3.339e-162
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 MSHLALGGTGVDSREFVALQCERVEEERAQCPDASGSTIPSLGEAEDHHEQDQLDGHQPGGTDRATGGVRDPRSGEELWRRCMEGRRRIDLLVEDYQRSLATRRVAFYEMIEALHRDREGHVMPRNMQSYSSYWQDEMGQCPPRIITSPGYSERLRRLNAALEDGGWTPQEEKIFKALVLKEKAAIQARLGLEGKDIPLLGRMTETARREDDKVERMLDWRKS 223
            MSHLALGGTGVDSREFVALQCERVEEERAQCPDASGSTIPSLGEAEDHHEQDQLDGHQPGGTDRATGGVRDPRSGEELWRRCMEGRRRIDLLVEDYQRSLATRRVAFYEMIEALHRDREGHVMPRNMQSYSSYWQDEMGQCPPRIITSPGYSERLRRLNAALEDGGWTPQEEKIFKALVLKEKAAIQARLGLEGKDIPLLGRMTETARREDDKVERMLDWRKS
Sbjct:    1 MSHLALGGTGVDSREFVALQCERVEEERAQCPDASGSTIPSLGEAEDHHEQDQLDGHQPGGTDRATGGVRDPRSGEELWRRCMEGRRRIDLLVEDYQRSLATRRVAFYEMIEALHRDREGHVMPRNMQSYSSYWQDEMGQCPPRIITSPGYSERLRRLNAALEDGGWTPQEEKIFKALVLKEKAAIQARLGLEGKDIPLLGRMTETARREDDKVERMLDWRKS 223
The following BLAST results are available for this feature:
BLAST of EWM25936.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107807|gb|EWM25936.1|3.339e-162100.00hypothetical protein Naga_100134g15 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4762rna4762Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications