EWM25937.1, cds4734 (CDS) Nannochloropsis gaditana

Overview
NameEWM25937.1
Unique Namecds4734
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:242301..242426 -
Alignment locationCM002464.1:241808..241932 -
Alignment locationCM002464.1:241654..241714 -
Alignment locationCM002464.1:241101..241190 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25937.1
Productke2 family protein
Orig transcript idgnl|cribi|Naga_100469g4.6985.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:242301..242426 -
CM002464.1supercontigCM002464.1:241808..241932 -
CM002464.1supercontigCM002464.1:241654..241714 -
CM002464.1supercontigCM002464.1:241101..241190 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
GO:0016272prefoldin complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0051082unfolded protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR009053Prefoldin
Homology
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|553194834|ref|XP_005856039.1| (ke2 family protein [Nannochloropsis gaditana CCMP526] >gi|422293031|gb|EKU20332.1| ke2 family protein [Nannochloropsis gaditana CCMP526] >gi|585107809|gb|EWM25937.1| ke2 family protein [Nannochloropsis gaditana])

HSP 1 Score: 260.381 bits (664), Expect = 9.327e-88
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
Query:    1 MSASAMDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAKAAAQDALKGVMA 133
            MSASAMDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAKAAAQDALKGVMA
Sbjct:    1 MSASAMDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAKAAAQDALKGVMA 133          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|325183821|emb|CCA18279.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325183989|emb|CCA18447.1| conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 95.1301 bits (235), Expect = 1.345e-22
Identity = 52/118 (44.07%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    6 MDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAKAA 123
            +D   A Y  L+ + Q L+A++Q   QQANEN MV+QELD +     VYKM+GPVLL+ +LE+AK NV KR++ IK  +    +KI+ K+ +A E+  +I T+Q E+Q + A+A++ A
Sbjct:    5 VDVETAKYHVLQEELQVLVAQQQKYRQQANENNMVKQELDLVHDETKVYKMVGPVLLKQDLEEAKTNVNKRIEFIKHELYKVTKKIEDKENEAIEVRKEIATIQMEMQKQAAEASRNA 122          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|635365975|emb|CCI45737.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 93.2041 bits (230), Expect = 6.644e-22
Identity = 50/118 (42.37%), Postives = 78/118 (66.10%), Query Frame = 0
Query:    6 MDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAKAA 123
            +D   A Y+ L+ + Q L+ ++Q   QQANEN MV+QELD +     VYKM+GPVLL+ +LE+AK NV KR++ I   +E   +KI+ K+ +A  +  +I T+Q E+Q + A+A++ A
Sbjct:    5 VDAETAKYRVLQEELQVLVTQQQKYTQQANENSMVKQELDLVHDETKVYKMVGPVLLKQDLEEAKTNVNKRIEFINHELEKVQKKIEEKETEAIRVRKEIATIQMEMQKQAAEASRNA 122          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|298706925|emb|CBJ29752.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 91.6633 bits (226), Expect = 3.610e-21
Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 0
Query:    6 MDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAK 121
            +D  L   + ++++ Q L A R    QQANENGMV+QELD LE    V+K++GPVL++ +LE+AKQNVAKRL+LI+  M    +  + KQK+   +G +IM MQ  ++ + A+ A+
Sbjct:   10 VDAELKKLQGVQSELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEAAIGDEIMRMQGGMKERAAEEAR 125          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|1173954135|gb|OQS01623.1| (hypothetical protein ACHHYP_00529 [Achlya hypogyna])

HSP 1 Score: 90.8929 bits (224), Expect = 6.633e-21
Identity = 46/107 (42.99%), Postives = 76/107 (71.03%), Query Frame = 0
Query:    7 DEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQ 113
            D  +A+Y+AL+ +   L  +RQ+  QQ NEN MV+QELD L+ G  VYK++GPVLL+ +  +AK NV+KRL+ I++ ME  ++K+Q K+++A ++   I ++Q ++Q
Sbjct:    8 DAEMAAYRALQEEVTVLANQRQLYAQQQNENSMVKQELDLLDDGAKVYKLVGPVLLKQDTAEAKSNVSKRLEFIQNEMEKVEKKLQAKEEEAVKIRQNIASIQMQMQ 114          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|1173960614|gb|OQS06724.1| (hypothetical protein THRCLA_20302 [Thraustotheca clavata])

HSP 1 Score: 90.5077 bits (223), Expect = 9.285e-21
Identity = 46/107 (42.99%), Postives = 75/107 (70.09%), Query Frame = 0
Query:    7 DEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQ 113
            D  +A+Y+AL+ +   L  +RQV  QQ NEN MV+QELD L+    VYK++GPVLL+ +  +AK NV+KRL+ I++ ME  ++K+Q K+++A ++   I ++Q ++Q
Sbjct:    8 DAEMAAYRALQEEVTVLANQRQVYAQQQNENSMVKQELDLLDDNAKVYKLVGPVLLKQDTSEAKSNVSKRLEFIQNEMEKVEKKLQAKEEEAVKIRQNIASIQMQMQ 114          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|953500272|emb|CEG38913.1| (prefoldin subunit 6 [Plasmopara halstedii])

HSP 1 Score: 90.1225 bits (222), Expect = 1.019e-20
Identity = 48/115 (41.74%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   10 LASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAKTADAAKAAA 124
            +  Y+AL+ + Q L  +RQ+  QQANEN MV++EL  L+    V+K++GPVLL+ E+++AK NV KRL+ I   ++  + KI+ K+K+A  +   I ++Q E+Q + A+AAK A 
Sbjct:   12 MTRYRALQDEVQVLARQRQMYAQQANENDMVKKELYLLDDEAKVFKLVGPVLLKQEVDEAKSNVNKRLEFINHELKKVNTKIEFKEKEAVSIRANISSLQMEMQKRAAEAAKGAV 126          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|695443802|ref|XP_009533790.1| (hypothetical protein PHYSODRAFT_317994 [Phytophthora sojae] >gi|695469479|ref|XP_009540146.1| hypothetical protein PHYSODRAFT_536504 [Phytophthora sojae] >gi|348664546|gb|EGZ04401.1| hypothetical protein PHYSODRAFT_536504 [Phytophthora sojae] >gi|348671224|gb|EGZ11045.1| hypothetical protein PHYSODRAFT_317994 [Phytophthora sojae])

HSP 1 Score: 88.5817 bits (218), Expect = 4.804e-20
Identity = 46/106 (43.40%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   10 LASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAK 115
            +  Y+AL+ + Q L  +RQ   QQANEN MV++ELD L+    VYK++GPVLL+ ++++AK NV KRL+ I + +   + KI+ K+K+A  + T I  MQ E+Q +
Sbjct:   12 MTRYRALQDEVQVLATQRQTYAQQANENDMVKKELDLLDDETKVYKLVGPVLLKQDVDEAKTNVNKRLEFINNELSKVNSKIEAKEKEAIGIRTNISNMQMEMQKR 117          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|301107326|ref|XP_002902745.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262097863|gb|EEY55915.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 88.5817 bits (218), Expect = 5.017e-20
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 0
Query:    6 MDEALASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAK 115
            +D  +A Y+AL+ + Q L  +RQ   QQANEN MV++ELD L+    VYK++GPVLL+ + ++AK NV KRL+ I + +   + KI+ K+K+A  +   I  MQ E+Q +
Sbjct:    8 VDTEMARYRALQDEVQVLATQRQTYAQQANENDMVKKELDLLDDEAKVYKLVGPVLLKQDADEAKSNVNKRLEFINNELNKVNSKIEAKEKEAVGIRNNISNMQMEMQKR 117          
BLAST of EWM25937.1 vs. NCBI_GenBank
Match: gi|675214119|ref|XP_008915944.1| (hypothetical protein PPTG_19283 [Phytophthora parasitica INRA-310] >gi|566031597|gb|ETI54508.1| hypothetical protein F443_02646 [Phytophthora parasitica P1569] >gi|567969311|gb|ETK94405.1| hypothetical protein L915_02528 [Phytophthora parasitica] >gi|567997702|gb|ETL47781.1| hypothetical protein L916_02500 [Phytophthora parasitica] >gi|568026924|gb|ETM00895.1| hypothetical protein L917_02434 [Phytophthora parasitica] >gi|568057404|gb|ETM54072.1| hypothetical protein L914_02523 [Phytophthora parasitica] >gi|568083746|gb|ETM98706.1| hypothetical protein PPTG_19283 [Phytophthora parasitica INRA-310] >gi|570335312|gb|ETO83260.1| hypothetical protein F444_02647 [Phytophthora parasitica P1976] >gi|570959360|gb|ETP24339.1| hypothetical protein F441_02608 [Phytophthora parasitica CJ01A1] >gi|570995480|gb|ETP52313.1| hypothetical protein F442_02619 [Phytophthora parasitica P10297] >gi|970660455|gb|KUF98003.1| hypothetical protein AM588_10007300 [Phytophthora nicotianae] >gi|970665536|gb|KUG02164.1| prefoldin subunit 6 [Phytophthora nicotianae])

HSP 1 Score: 87.8113 bits (216), Expect = 1.072e-19
Identity = 45/106 (42.45%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   10 LASYKALEADTQELMARRQVTLQQANENGMVQQELDGLEAGENVYKMMGPVLLRVELEDAKQNVAKRLDLIKSTMEDFDQKIQGKQKDAEELGTKIMTMQQELQAK 115
            +  Y++L+ + Q L  +RQ   QQANEN MV++ELD L+    VYK++GPVLL+ ++++AK NV KRL+ I + +   + KI+ K+K+A  + T I  MQ E+Q +
Sbjct:   12 MTRYRSLQDEVQVLATQRQTYAQQANENDMVKKELDLLDDEAKVYKLVGPVLLKQDVDEAKSNVNKRLEFINNELNKVNTKIEAKEKEAVGIRTNISNMQMEMQKR 117          
The following BLAST results are available for this feature:
BLAST of EWM25937.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Position :
0
Zoom :
x 1
01SequenceXP_005856039.1CCA18279.1CCI45737.1CBJ29752.1OQS01623.1OQS06724.1CEG38913.1XP_009533790.1XP_002902745.1XP_008915944.1
Match NameE-valueIdentityDescription
gi|553194834|ref|XP_005856039.1|9.327e-88100.00ke2 family protein [Nannochloropsis gaditana CCMP5... [more]
gi|325183821|emb|CCA18279.1|1.345e-2244.07conserved hypothetical protein [Albugo laibachii N... [more]
gi|635365975|emb|CCI45737.1|6.644e-2242.37unnamed protein product [Albugo candida][more]
gi|298706925|emb|CBJ29752.1|3.610e-2143.97conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173954135|gb|OQS01623.1|6.633e-2142.99hypothetical protein ACHHYP_00529 [Achlya hypogyna... [more]
gi|1173960614|gb|OQS06724.1|9.285e-2142.99hypothetical protein THRCLA_20302 [Thraustotheca c... [more]
gi|953500272|emb|CEG38913.1|1.019e-2041.74prefoldin subunit 6 [Plasmopara halstedii][more]
gi|695443802|ref|XP_009533790.1|4.804e-2043.40hypothetical protein PHYSODRAFT_317994 [Phytophtho... [more]
gi|301107326|ref|XP_002902745.1|5.017e-2042.73conserved hypothetical protein [Phytophthora infes... [more]
gi|675214119|ref|XP_008915944.1|1.072e-1942.45hypothetical protein PPTG_19283 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4746rna4746Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications