EWM25942.1, cds4731 (CDS) Nannochloropsis gaditana

Overview
NameEWM25942.1
Unique Namecds4731
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:235080..235429 +
Alignment locationCM002464.1:235587..235626 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25942.1
Product1-acyl-sn-glycerol-3-phosphate acyltransferase
Orig transcript idgnl|cribi|Naga_102294g1.6049.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:235080..235429 +
CM002464.1supercontigCM002464.1:235587..235626 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|585107815|gb|EWM25942.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 259.225 bits (661), Expect = 1.541e-87
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    1 MTIAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPGRPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAARRRPSWPWSGCV 129
            MTIAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPGRPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAARRRPSWPWSGCV
Sbjct:    1 MTIAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPGRPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAARRRPSWPWSGCV 129          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1147709932|dbj|BAW99691.1| (lysophosphatidate acyltransferase 3 [Nannochloropsis sp. NIES-2145])

HSP 1 Score: 109.383 bits (272), Expect = 1.662e-25
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   57 EGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAA 117
            E   A L HTFLRFCNG+GPRDVHIRLKRY L +V+ DPHWLD +WAEKDRVLTYF RHA 
Sbjct:  299 ESHDASLFHTFLRFCNGEGPRDVHIRLKRYSLNDVLADPHWLDTKWAEKDRVLTYFSRHAC 359          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|298706956|emb|CBJ29775.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 73.9442 bits (180), Expect = 6.659e-13
Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 0
Query:   73 GQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
            G+G +D+H+R+KRY L EV+GD HWLD+RWAEK+R+L YF RH
Sbjct:  534 GRGCQDIHVRIKRYSLEEVVGDTHWLDDRWAEKERLLAYFSRH 576          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1210525699|dbj|GAX15515.1| (lysocardiolipin and lysophospholipid acyltransferase [Fistulifera solaris])

HSP 1 Score: 67.781 bits (164), Expect = 9.138e-11
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   76 PRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
            PR+VHIR+KRY L EV+ D  W+D +WAEKDR+L+YF RH
Sbjct:  367 PREVHIRIKRYSLEEVLQDSSWMDKKWAEKDRLLSYFSRH 406          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1072233761|gb|OEU18491.1| (hypothetical protein FRACYDRAFT_260417 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 67.781 bits (164), Expect = 1.093e-10
Identity = 42/114 (36.84%), Postives = 54/114 (47.37%), Query Frame = 0
Query:    3 IAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPG-RPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
            + +P TTG + S S    SSP          G R S P          P +          L +T  R    Q P ++HIR+KRY + EV+ D  WLD +WAEKDR+L YF RH
Sbjct:  320 LLLPRTTGFNASISSLRESSPIIYDVTIAYKGYRGSVP----------PQNDKVDGLSLLSLWNTLRR----QYPNEIHIRIKRYSMEEVLQDSSWLDKKWAEKDRMLQYFSRH 419          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|219117752|ref|XP_002179665.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408718|gb|EEC48651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 64.3142 bits (155), Expect = 1.792e-9
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   76 PRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
            PR++HIR+KRY + EV  D  WLD +WAEKDR+L++F RH
Sbjct:  365 PREIHIRIKRYSMEEVTQDSSWLDQKWAEKDRLLSHFARH 404          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|390994301|gb|AFM37315.1| (lysophosphatidic acid acyltransferase [Phaeodactylum tricornutum])

HSP 1 Score: 62.3882 bits (150), Expect = 7.679e-9
Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   76 PRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
            PR+++IR+KRY + EV  D  WLD +WAEKDR+L++F RH
Sbjct:  373 PREIYIRIKRYSMEEVTQDSSWLDQKWAEKDRLLSHFARH 412          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|758351020|dbj|GAN06792.1| (conserved hypothetical protein [Mucor ambiguus])

HSP 1 Score: 60.077 bits (144), Expect = 4.530e-8
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0
Query:   70 FCNGQGPRDVHIRLKRYPLAEVMGD----PHWLDNRWAEKDRVLTYFGRHA 116
            FC G GP ++HI ++RY LA++  D     HWL +RW EKD+ L YF  H 
Sbjct:  284 FCEGNGPHEIHIHMRRYRLADLPTDTESFSHWLLDRWTEKDKRLIYFNEHG 334          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|511010645|gb|EPB91865.1| (hypothetical protein HMPREF1544_01374 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 56.6102 bits (135), Expect = 6.638e-7
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:   70 FCNGQGPRDVHIRLKRYPLAEVMGD----PHWLDNRWAEKDRVLTYFGRH 115
            FC G GP ++HI ++RY LA++  D     HWL +RW EKD+ L YF  H
Sbjct:  212 FCEGNGPHEIHIHMRRYRLADLPTDTESFTHWLLDRWTEKDKRLVYFNEH 261          
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1026272494|gb|OAD05534.1| (hypothetical protein MUCCIDRAFT_141074 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 56.6102 bits (135), Expect = 7.175e-7
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:   70 FCNGQGPRDVHIRLKRYPLAEVMGD----PHWLDNRWAEKDRVLTYFGRH 115
            FC G GP ++HI ++RY LA++  D     HWL +RW EKD+ L YF  H
Sbjct:  175 FCEGNGPHEIHIHMRRYRLADLPTDTESFTHWLLDRWTEKDKRLIYFNEH 224          
The following BLAST results are available for this feature:
BLAST of EWM25942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107815|gb|EWM25942.1|1.541e-87100.001-acyl-sn-glycerol-3-phosphate acyltransferase [Na... [more]
gi|1147709932|dbj|BAW99691.1|1.662e-2575.41lysophosphatidate acyltransferase 3 [Nannochlorops... [more]
gi|298706956|emb|CBJ29775.1|6.659e-1365.121-acyl-sn-glycerol-3-phosphate acyltransferase [Ec... [more]
gi|1210525699|dbj|GAX15515.1|9.138e-1165.00lysocardiolipin and lysophospholipid acyltransfera... [more]
gi|1072233761|gb|OEU18491.1|1.093e-1036.84hypothetical protein FRACYDRAFT_260417 [Fragilario... [more]
gi|219117752|ref|XP_002179665.1|1.792e-960.00predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|390994301|gb|AFM37315.1|7.679e-957.50lysophosphatidic acid acyltransferase [Phaeodactyl... [more]
gi|758351020|dbj|GAN06792.1|4.530e-847.06conserved hypothetical protein [Mucor ambiguus][more]
gi|511010645|gb|EPB91865.1|6.638e-748.00hypothetical protein HMPREF1544_01374 [Mucor circi... [more]
gi|1026272494|gb|OAD05534.1|7.175e-748.00hypothetical protein MUCCIDRAFT_141074 [Mucor circ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4743rna4743Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications