EWM25942.1, cds4731 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|585107815|gb|EWM25942.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 259.225 bits (661), Expect = 1.541e-87 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 1 MTIAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPGRPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAARRRPSWPWSGCV 129
MTIAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPGRPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAARRRPSWPWSGCV
Sbjct: 1 MTIAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPGRPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAARRRPSWPWSGCV 129
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1147709932|dbj|BAW99691.1| (lysophosphatidate acyltransferase 3 [Nannochloropsis sp. NIES-2145]) HSP 1 Score: 109.383 bits (272), Expect = 1.662e-25 Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0
Query: 57 EGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRHAA 117
E A L HTFLRFCNG+GPRDVHIRLKRY L +V+ DPHWLD +WAEKDRVLTYF RHA
Sbjct: 299 ESHDASLFHTFLRFCNGEGPRDVHIRLKRYSLNDVLADPHWLDTKWAEKDRVLTYFSRHAC 359
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|298706956|emb|CBJ29775.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 73.9442 bits (180), Expect = 6.659e-13 Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 0
Query: 73 GQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
G+G +D+H+R+KRY L EV+GD HWLD+RWAEK+R+L YF RH
Sbjct: 534 GRGCQDIHVRIKRYSLEEVVGDTHWLDDRWAEKERLLAYFSRH 576
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1210525699|dbj|GAX15515.1| (lysocardiolipin and lysophospholipid acyltransferase [Fistulifera solaris]) HSP 1 Score: 67.781 bits (164), Expect = 9.138e-11 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 76 PRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
PR+VHIR+KRY L EV+ D W+D +WAEKDR+L+YF RH
Sbjct: 367 PREVHIRIKRYSLEEVLQDSSWMDKKWAEKDRLLSYFSRH 406
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1072233761|gb|OEU18491.1| (hypothetical protein FRACYDRAFT_260417 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 67.781 bits (164), Expect = 1.093e-10 Identity = 42/114 (36.84%), Postives = 54/114 (47.37%), Query Frame = 0
Query: 3 IAIPGTTGHHPSFSPSSPSSPAPSPSLPPAPG-RPSPPSSSTAAQTVAPSHGARPEGEHAGLLHTFLRFCNGQGPRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
+ +P TTG + S S SSP G R S P P + L +T R Q P ++HIR+KRY + EV+ D WLD +WAEKDR+L YF RH
Sbjct: 320 LLLPRTTGFNASISSLRESSPIIYDVTIAYKGYRGSVP----------PQNDKVDGLSLLSLWNTLRR----QYPNEIHIRIKRYSMEEVLQDSSWLDKKWAEKDRMLQYFSRH 419
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|219117752|ref|XP_002179665.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408718|gb|EEC48651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 64.3142 bits (155), Expect = 1.792e-9 Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 76 PRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
PR++HIR+KRY + EV D WLD +WAEKDR+L++F RH
Sbjct: 365 PREIHIRIKRYSMEEVTQDSSWLDQKWAEKDRLLSHFARH 404
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|390994301|gb|AFM37315.1| (lysophosphatidic acid acyltransferase [Phaeodactylum tricornutum]) HSP 1 Score: 62.3882 bits (150), Expect = 7.679e-9 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 76 PRDVHIRLKRYPLAEVMGDPHWLDNRWAEKDRVLTYFGRH 115
PR+++IR+KRY + EV D WLD +WAEKDR+L++F RH
Sbjct: 373 PREIYIRIKRYSMEEVTQDSSWLDQKWAEKDRLLSHFARH 412
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|758351020|dbj|GAN06792.1| (conserved hypothetical protein [Mucor ambiguus]) HSP 1 Score: 60.077 bits (144), Expect = 4.530e-8 Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0
Query: 70 FCNGQGPRDVHIRLKRYPLAEVMGD----PHWLDNRWAEKDRVLTYFGRHA 116
FC G GP ++HI ++RY LA++ D HWL +RW EKD+ L YF H
Sbjct: 284 FCEGNGPHEIHIHMRRYRLADLPTDTESFSHWLLDRWTEKDKRLIYFNEHG 334
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|511010645|gb|EPB91865.1| (hypothetical protein HMPREF1544_01374 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 56.6102 bits (135), Expect = 6.638e-7 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 70 FCNGQGPRDVHIRLKRYPLAEVMGD----PHWLDNRWAEKDRVLTYFGRH 115
FC G GP ++HI ++RY LA++ D HWL +RW EKD+ L YF H
Sbjct: 212 FCEGNGPHEIHIHMRRYRLADLPTDTESFTHWLLDRWTEKDKRLVYFNEH 261
BLAST of EWM25942.1 vs. NCBI_GenBank
Match: gi|1026272494|gb|OAD05534.1| (hypothetical protein MUCCIDRAFT_141074 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 56.6102 bits (135), Expect = 7.175e-7 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 70 FCNGQGPRDVHIRLKRYPLAEVMGD----PHWLDNRWAEKDRVLTYFGRH 115
FC G GP ++HI ++RY LA++ D HWL +RW EKD+ L YF H
Sbjct: 175 FCEGNGPHEIHIHMRRYRLADLPTDTESFTHWLLDRWTEKDKRLIYFNEH 224 The following BLAST results are available for this feature:
BLAST of EWM25942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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