EWM25951.1, cds4723 (CDS) Nannochloropsis gaditana

Overview
NameEWM25951.1
Unique Namecds4723
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:213498..213851 +
Alignment locationCM002464.1:214071..214296 +
Alignment locationCM002464.1:214555..214607 +
Alignment locationCM002464.1:214938..215534 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25951.1
Productcoproporphyrinogen iii oxidase chloroplast precursor
Orig transcript idgnl|cribi|Naga_100665g2.2037.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:213498..213851 +
CM002464.1supercontigCM002464.1:214071..214296 +
CM002464.1supercontigCM002464.1:214555..214607 +
CM002464.1supercontigCM002464.1:214938..215534 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004109coproporphyrinogen oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR018375Coprogen_oxidase_CS
IPR001260Coprogen_oxidase_aer
Homology
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|585107828|gb|EWM25951.1| (coproporphyrinogen iii oxidase chloroplast precursor [Nannochloropsis gaditana])

HSP 1 Score: 853.973 bits (2205), Expect = 0.000e+0
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query:    1 MPALAAAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
            MPALAAAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV
Sbjct:    1 MPALAAAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|553194809|ref|XP_005856032.1| (coproporphyrinogen III oxidase, partial [Nannochloropsis gaditana CCMP526] >gi|422293024|gb|EKU20325.1| coproporphyrinogen III oxidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 771.155 bits (1990), Expect = 0.000e+0
Identity = 375/397 (94.46%), Postives = 375/397 (94.46%), Query Frame = 0
Query:    6 AAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLK-------------------PGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARW 383
            AAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAA APTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGL                     GERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARW
Sbjct:    1 AAVASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAASAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLXXXXKEGGREGGRGGGKEGGKGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARW 397          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|1210514386|dbj|GAX26716.1| (coproporphyrinogen III oxidase [Fistulifera solaris])

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 267/404 (66.09%), Postives = 307/404 (75.99%), Query Frame = 0
Query:   12 LLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAM--AAPAPTKEAGP-SIGWDSHKAVDSVPESLVR---GVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
             LL  + S  +F   AR            +A  GGS         +S    + +VA   A PA  KEA P  +GWDSHK V+  P +LVR   G EGN  MR +FEK CR+AQIAI KA+E+ DG  KF  D W RA+GGGG+S VL  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKG+KPGERVPFFACGLSSVMHP+NP CPTMHFNYRYFET+GG WWFGGG DITPSY++ EDM HFHGT K VCDKHD  YY +FK+WAD YF+I+HR ETRGLGGIFFDDQND+ P+ HFAFSEE L +V +AY PIIEKHK+D +T+E+K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY+ +P EGSPEAE ++A + PR WV
Sbjct:    5 FLLFLAVSAHSFVPQAR------------VAFRGGSLDAAPAKAGKSKKATKGKVATKEAPPAEKKEAPPVHLGWDSHKPVEEAPSTLVRPEDGPEGNYPMRAKFEKMCRDAQIAITKAIEEIDGEGKFQEDCWTRANGGGGMSRVLSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPKNPFCPTMHFNYRYFETDGGVWWFGGGTDITPSYIDEEDMKHFHGTYKEVCDKHDPKYYQEFKEWADRYFVIQHRNETRGLGGIFFDDQNDRDPEAHFAFSEEALNSVIKAYGPIIEKHKNDEFTQEQKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYNAQPKEGSPEAEFIDACRHPRNWV 396          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|1210531308|dbj|GAX10069.1| (coproporphyrinogen III oxidase [Fistulifera solaris])

HSP 1 Score: 540.806 bits (1392), Expect = 0.000e+0
Identity = 266/404 (65.84%), Postives = 305/404 (75.50%), Query Frame = 0
Query:   12 LLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAM--AAPAPTKEAGP-SIGWDSHKAVDSVPESLVR---GVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
             LL  + S  +F   AR            +A  GGS         +S      +VA   A  A  KEA P  +GWDSHK V+  P +LVR   G EGN  MR +FEK CR+AQIAI KA+E+ DG  KF  D W RA+GGGG+S VL  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKG+KPGERVPFFACGLSSVMHP+NP CPTMHFNYRYFET+GG WWFGGG DITPSY++ EDM HFHGT K VCDKHD  YY +FK+WAD YF+I+HR ETRGLGGIFFDDQND+ P+ HFAFSEE L +V +AY PIIEKHK+D +T+E+K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY+ +P EGSPEAE ++A + PR WV
Sbjct:    5 FLLFLAVSAHSFVPQAR------------VAFRGGSLDAAPTKAGKSKKATNGKVATKEAPTAEKKEAPPVHLGWDSHKPVEEAPSTLVRPEDGPEGNYPMRAKFEKMCRDAQIAITKAIEEIDGEGKFQEDCWTRANGGGGMSRVLSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPKNPFCPTMHFNYRYFETDGGVWWFGGGTDITPSYIDEEDMKHFHGTYKEVCDKHDPKYYQEFKEWADRYFVIQHRNETRGLGGIFFDDQNDRDPEAHFAFSEEALNSVIKAYGPIIEKHKNDEFTQEQKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYNAQPREGSPEAEFIDACRHPRNWV 396          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|1072239008|gb|OEU23735.1| (coproporphyrinogen III oxidase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 259/404 (64.11%), Postives = 308/404 (76.24%), Query Frame = 0
Query:    9 ASLLLLLSSGSTDAFTSAARPRVSTSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVR---GVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
             +L+ LLS+ +T   ++   PR  +S      +A  G S  +             ++   A P        ++GWDSH AVD++P+SLVR   G +GN  MR +FEK CREAQ  I KA+E+ DG A F  DAW R +GGGG+S V+  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKG+ PGERVPFFACGLSSVMHP+NPHCPTMHFNYRYFET+GG WWFGGG DITPSY+N +D+ HFHGT K VCDKHD  YY +FK+WAD YF+I+HR ETRGLGGIFFDDQN+K P+QHF FS+E + +V +AY PIIEKHKDD +T++EK+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY+  P EGSPEAE ++A K+PREWV
Sbjct:    5 VALVALLSTAAT--VSNGFMPRNPSS------VARGGSSFNMSTEEKTDDNKVEGKKAEDAPPV-------NLGWDSHSAVDTIPDSLVREGDGPDGNYPMRSKFEKMCREAQFKITKAIEEIDGEAVFREDAWTRDNGGGGMSRVMSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPKNPHCPTMHFNYRYFETDGGVWWFGGGTDITPSYVNEDDLKHFHGTYKEVCDKHDPGYYKEFKEWADRYFVIQHRNETRGLGGIFFDDQNNKDPEQHFNFSQECVNSVVKAYGPIIEKHKDDPFTQKEKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYNVIPEEGSPEAEFIDACKNPREWV 393          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|551658682|ref|XP_005832111.1| (plastid coproporphyrinogen oxidase [Guillardia theta CCMP2712] >gi|428176245|gb|EKX45131.1| plastid coproporphyrinogen oxidase [Guillardia theta CCMP2712])

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 254/382 (66.49%), Postives = 293/382 (76.70%), Query Frame = 0
Query:   32 STSGYIHQPIANVGGSRRLDAVAMARSAPCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATER----GVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
            S SG      ++V  SRR   ++ AR+      R     P    E    +G+DSHKAVD  P++L R    N +MR +FEK  REAQ  ICK+VE+ DGGAKF +DAW R  GGGGIS VL  GKVWEKAGCNLSVVYGSMP EALQAA +R      DRAKG  PGERVPFFACGLSSVMHP+NPHCPTMHFNYRYFETEGG WWFGGG DITP+YLN +DM +FHGT K VCDKHD  +YPKFKKWADEYF IKHRGETRGLGGIFFDD ND+ P++ F F++E    V +AYLPI+E HK+D +T++EK+WQ +RRGRY EFNLVYDRGT+FGLKTGGRIESILMSLPETARWEYDHRP  GS EAE++E F++PR+WV
Sbjct:   34 SLSGIRTNFASSVSKSRRAYPLSWARAL-----RATATKPDQKSEG---LGFDSHKAVDKAPDTLCRDGTANTAMRAKFEKMLREAQDYICKSVENVDGGAKFQTDAWTREGGGGGISRVLTGGKVWEKAGCNLSVVYGSMPSEALQAANDRLKFGATDRAKGYAPGERVPFFACGLSSVMHPKNPHCPTMHFNYRYFETEGGVWWFGGGTDITPAYLNVDDMKYFHGTYKEVCDKHDPEFYPKFKKWADEYFFIKHRGETRGLGGIFFDDLNDRDPEKIFEFAKECAMNVPKAYLPIVEAHKNDPFTQKEKEWQLMRRGRYVEFNLVYDRGTIFGLKTGGRIESILMSLPETARWEYDHRPEPGSKEAEVLEVFRNPRDWV 407          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|922868966|gb|KOO35212.1| (coproporphyrinogen iii oxidase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0
Identity = 252/345 (73.04%), Postives = 280/345 (81.16%), Query Frame = 0
Query:   67 AMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVE---GNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREW 408
            A   PAP+  A   I WDSHK V   PE+LVR  +    N  MRRRFE  CR AQ AICKAVE+ DG  KF  D W R  GGGGIS VL  G V+EKAGC+LSVVYGSMPQEALQ+AT RG DRAKG  PGERVPFFACGLSSVMHPRNP+ PTMHFNYRYFETEGG WWFGGG D+TPSYL  ED+ HFHGT K+VCDKHD  YY +FKKWADEYF+IKHRGETRGLGGIFFDD N+K P+  FAFS+E L +V  AYLP++ KHKDDA+TE++K+WQQ+RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY H+  EGSPEA+IM+AFK+PREW
Sbjct:   43 APVKPAPSMPA--PITWDSHKYVSEAPETLVRDDDLSGANMDMRRRFEANCRRAQNAICKAVEELDG-CKFQEDVWTREGGGGGISRVLAGGNVFEKAGCSLSVVYGSMPQEALQSATSRGADRAKGYAPGERVPFFACGLSSVMHPRNPNAPTMHFNYRYFETEGGVWWFGGGTDLTPSYLFEEDVKHFHGTYKKVCDKHDPTYYARFKKWADEYFVIKHRGETRGLGGIFFDDLNEKEPETLFAFSKECLDSVVPAYLPLVAKHKDDAFTEQQKEWQQMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYCHKVQEGSPEADIMDAFKNPREW 384          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|676381919|ref|XP_009034238.1| (hypothetical protein AURANDRAFT_52628 [Aureococcus anophagefferens] >gi|323454766|gb|EGB10635.1| hypothetical protein AURANDRAFT_52628 [Aureococcus anophagefferens])

HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0
Identity = 246/350 (70.29%), Postives = 277/350 (79.14%), Query Frame = 0
Query:   60 PCYRRRVAMAAPAPTKEAGPSIGWDSHKAVDSVPESLVRGVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
            P  +      APAPT        WD H A+D+ PE+L +G++GN+SMRR+FE   R AQ  I  AVE+ DG   F  D W R +GGGGIS V+  GKV+EKAG +LSVVYGSMPQEAL +ATERGVDRA G+KPGERVPFFACGLSSVMHPRNP  PTMHFNYRYFET+GG WWFGGG DITP+YL  EDM HFHGT K +CDKHD  YY KFKKWADEYF+IKHRGETRGLGGIFFDDQN+K PD HFAFSEE +  VTEAYLP++ K KD  +TE+EK+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYD +    S EAEIM+ FK+PREWV
Sbjct:   17 PATKLSATATAPAPT--------WDDHVAIDAPPETLCKGLDGNDSMRRKFEVMLRAAQNKITSAVEELDGEGTFKQDVWERENGGGGISRVMSGGKVFEKAGVSLSVVYGSMPQEALASATERGVDRAAGMKPGERVPFFACGLSSVMHPRNPMAPTMHFNYRYFETDGGVWWFGGGTDITPAYLFEEDMKHFHGTYKEICDKHDPEYYAKFKKWADEYFVIKHRGETRGLGGIFFDDQNNKDPDTHFAFSEECVNAVTEAYLPVVAKRKDSPFTEKEKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDFKVEPDSKEAEIMDCFKNPREWV 358          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|397617333|gb|EJK64385.1| (hypothetical protein THAOC_14884 [Thalassiosira oceanica] >gi|397635609|gb|EJK71933.1| hypothetical protein THAOC_06585 [Thalassiosira oceanica])

HSP 1 Score: 520.776 bits (1340), Expect = 0.000e+0
Identity = 242/333 (72.67%), Postives = 272/333 (81.68%), Query Frame = 0
Query:   80 SIGWDSHKAVDSVPESLVR---GVEGNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREWV 409
            +IGWDSHK VD VP+SLVR   G +GN  MR +FE   REAQI+I  A+E  DG  KF  D W RA+GGGG+S VL  G V+EKAG NLSVVYGSMPQEALQAATERGVDRAKG+ PGERVPFFACGLS VMHPRNP CPTMHFNYRYFET+GG WWFGGG DITP+YLN +DM HFHGT K VCD+HD  +YPKFK WAD YF+I HR ETRGLGGIFFDD ND+ P++ F F++E + +V  AY PIIE HK+D +TE+ K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDH    GSPEAEIM+AFK PR+WV
Sbjct:   73 NIGWDSHKPVDIVPDSLVRPGDGPDGNYPMRSKFESMIREAQISITDAIEKIDGKGKFQEDCWTRANGGGGMSRVLAGGDVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSCVMHPRNPFCPTMHFNYRYFETDGGVWWFGGGTDITPAYLNEDDMRHFHGTYKDVCDRHDPEFYPKFKAWADRYFVISHRNETRGLGGIFFDDMNDRDPEELFEFAKEAVNSVVPAYGPIIEAHKNDPFTEKNKQWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHAEPGSPEAEIMDAFKHPRDWV 405          
BLAST of EWM25951.1 vs. NCBI_GenBank
Match: gi|551548829|ref|XP_005762057.1| (coproporphyrinogen oxidase [Emiliania huxleyi CCMP1516] >gi|485610935|gb|EOD09628.1| coproporphyrinogen oxidase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 518.079 bits (1333), Expect = 0.000e+0
Identity = 241/331 (72.81%), Postives = 272/331 (82.18%), Query Frame = 0
Query:   81 IGWDSHKAVDSVPESLVRGVE---GNESMRRRFEKACREAQIAICKAVEDCDGGAKFHSDAWVRADGGGGISMVLKDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGLKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLNTEDMTHFHGTLKRVCDKHDAAYYPKFKKWADEYFLIKHRGETRGLGGIFFDDQNDKSPDQHFAFSEELLQTVTEAYLPIIEKHKDDAYTEEEKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHRPVEGSPEAEIMEAFKSPREW 408
            I WDSH+ VD  PESL+R  +    N+ MRRRFE+ CR AQ AICKAV + DG A+F  D W R  GGGGIS VL +G V+EKAGC+LSVVYGSMPQ+ALQ+AT RG DRAKG  PGERVPFFACGLSSVMHPRNP  PTMHFNYRYFET+GG WWFGGG DITP+YL  ED+ HFH T K VCD HD  YY +FKKWADEYF IKHRGETRGLGGIFFDDQND+ P+  FAFS+E L +V  AYLP++ KHKDD++T+++K+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEY H P  GSPEAEIM+AFK+PREW
Sbjct:   50 ISWDSHQYVDQAPESLIRDDDLQGANQDMRRRFEENCRRAQNAICKAVSELDG-AEFREDVWTRPGGGGGISRVLCNGNVFEKAGCSLSVVYGSMPQDALQSATSRGADRAKGYAPGERVPFFACGLSSVMHPRNPMAPTMHFNYRYFETDGGVWWFGGGSDITPAYLFEEDIAHFHQTYKDVCDTHDPEYYARFKKWADEYFTIKHRGETRGLGGIFFDDQNDRDPEAIFAFSKECLDSVVPAYLPLVAKHKDDSFTQQQKEWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYSHEPAAGSPEAEIMDAFKTPREW 379          
The following BLAST results are available for this feature:
BLAST of EWM25951.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107828|gb|EWM25951.1|0.000e+0100.00coproporphyrinogen iii oxidase chloroplast precurs... [more]
gi|553194809|ref|XP_005856032.1|0.000e+094.46coproporphyrinogen III oxidase, partial [Nannochlo... [more]
gi|1210514386|dbj|GAX26716.1|0.000e+066.09coproporphyrinogen III oxidase [Fistulifera solari... [more]
gi|1210531308|dbj|GAX10069.1|0.000e+065.84coproporphyrinogen III oxidase [Fistulifera solari... [more]
gi|1072239008|gb|OEU23735.1|0.000e+064.11coproporphyrinogen III oxidase [Fragilariopsis cyl... [more]
gi|551658682|ref|XP_005832111.1|0.000e+066.49plastid coproporphyrinogen oxidase [Guillardia the... [more]
gi|922868966|gb|KOO35212.1|0.000e+073.04coproporphyrinogen iii oxidase [Chrysochromulina s... [more]
gi|676381919|ref|XP_009034238.1|0.000e+070.29hypothetical protein AURANDRAFT_52628 [Aureococcus... [more]
gi|397617333|gb|EJK64385.1|0.000e+072.67hypothetical protein THAOC_14884 [Thalassiosira oc... [more]
gi|551548829|ref|XP_005762057.1|0.000e+072.81coproporphyrinogen oxidase [Emiliania huxleyi CCMP... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4735rna4735Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications