EWM25971.1, cds4703 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|585107865|gb|EWM25971.1| (r- vamp71-family [Nannochloropsis gaditana]) HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
Query: 1 MTSGCTPEKRGSSGARDQEYRDLPPGSLCCPARFEGKFTLHLQQNRATTMTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNSPDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGCGKR 271
MTSGCTPEKRGSSGARDQEYRDLPPGSLCCPARFEGKFTLHLQQNRATTMTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNSPDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGCGKR
Sbjct: 1 MTSGCTPEKRGSSGARDQEYRDLPPGSLCCPARFEGKFTLHLQQNRATTMTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNSPDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGCGKR 271
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|676393301|ref|XP_009039928.1| (hypothetical protein AURANDRAFT_70318 [Aureococcus anophagefferens] >gi|323449389|gb|EGB05277.1| hypothetical protein AURANDRAFT_70318 [Aureococcus anophagefferens]) HSP 1 Score: 263.848 bits (673), Expect = 1.607e-85 Identity = 125/221 (56.56%), Postives = 163/221 (73.76%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNSP--DAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC 268
MTILYAL+ARGK VL E+T SGNFPT+TRLLLG+I GK SY+YD +VFHY+ + L YLCM DDP ++ R PFA+L D+K RFL YG + A TAIAFAMN EFS +L++QM+ FN P D +A+ KLDDV+NVM+QN+++VLERGEKLELLVDKT L +AF FE+SSR+L+ M W++++ Y+L GL+ ++ +I+ ACG DF C
Sbjct: 1 MTILYALVARGKTVLSEFTFTSGNFPTITRLLLGRIDMARSGKMSYIYDQYVFHYVCEEGLLYLCMCDDPDSQKRRVPFAFLEDVKRRFLAAYG-DVAQTAIAFAMNLEFSRVLQQQMELFNGPMGDRQQFNAVHQKLDDVKNVMVQNIEMVLERGEKLELLVDKTDRLNTTAFTFEKSSRKLKEAMFWKKVKLYMLAIGLLGFVVFIITWVACGADFGKC 220
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|676379781|ref|XP_009033169.1| (hypothetical protein AURANDRAFT_36201 [Aureococcus anophagefferens] >gi|323456208|gb|EGB12075.1| hypothetical protein AURANDRAFT_36201 [Aureococcus anophagefferens]) HSP 1 Score: 256.529 bits (654), Expect = 1.204e-82 Identity = 114/222 (51.35%), Postives = 165/222 (74.32%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNSPDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGCGKR 271
MTILYAL+ARG VL EYT SGNFPT+TR+LLGKIP +DGK SYVYD +VFHY+V +++T+LCM D+ ++R PFA+L+D+K+RF YG + AIAFA NE+F +++Q++++N P A + + KLDDV+NVM+QN+++VLERGEKLELLVDK+ LQ +F+F++SS++LR M W++++ Y+LI +++ L+ + A CG F CG +
Sbjct: 1 MTILYALVARGNTVLAEYTFTSGNFPTITRVLLGKIPE-QDGKMSYVYDQYVFHYVVENKMTFLCMADESFKRR--VPFAFLDDVKNRFFATYG-DKGQAAIAFAYNEDFGRTIQKQLEFYNGPQADQFATVHKKLDDVKNVMVQNIEMVLERGEKLELLVDKSEQLQLDSFRFQKSSKKLRQAMFWKKVKIYMLIACVVLVLLYIFLAVLCGPTFEKCGNK 218
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|1173957945|gb|OQS04380.1| (vesicle-associated membrane protein [Thraustotheca clavata]) HSP 1 Score: 245.358 bits (625), Expect = 3.391e-78 Identity = 121/220 (55.00%), Postives = 155/220 (70.45%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNS-PDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC 268
M I+YAL+ARGK VL EYTA SGNFPTVTR+LL KIP ED K SYVYD HVFHYIV D +TYLCM D+ ++R PF +L D+K+RFLT YG + TAIAFAMN EF +++RQMDYFN+ P+ +Q LD+V++ M++N++ VL RGEK ELLVD+T L +F F R SR+LR M WR ++ +L + L V +I + + ACGFDF C
Sbjct: 1 MAIVYALVARGKIVLAEYTASSGNFPTVTRVLLAKIPL-EDSKMSYVYDMHVFHYIVKDGITYLCMADNDFKRR--VPFQFLEDMKNRFLTTYG-DRGRTAIAFAMNAEFQHVIQRQMDYFNANPEVDTVIQVQQSLDEVKDTMVENIEKVLGRGEKFELLVDRTDQLNQQSFVFNRKSRKLRKAMWWRSMKMWLCLGCLAVLIIYFVISMACGFDFSSC 216
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|669151914|ref|XP_008611519.1| (hypothetical protein SDRG_07463 [Saprolegnia diclina VS20] >gi|530736993|gb|EQC35235.1| hypothetical protein SDRG_07463 [Saprolegnia diclina VS20]) HSP 1 Score: 243.432 bits (620), Expect = 1.665e-77 Identity = 121/220 (55.00%), Postives = 156/220 (70.91%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNS-PDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC 268
M I+YALIARGK VL EYTA SGNFPTVTR+LL KIP +D K SYVYD HVFHY+V D +TYLCM D+ ++R PF +L+D+K RFLT YG + TAIAFAMN EF +++RQMDYFN+ PD +Q LDDV++ M++N++ VL RGEK ELLVD+T L +F F R SR+LR M WR ++ ++ + L + +I L+ + ACGFDF C
Sbjct: 1 MPIVYALIARGKTVLAEYTASSGNFPTVTRVLLAKIP-VDDSKMSYVYDKHVFHYVVKDGITYLCMADNDFKRR--VPFQFLDDLKARFLTTYG-DRGRTAIAFAMNAEFQHVIQRQMDYFNANPDVDTVVQVQQTLDDVKDTMVENIEKVLGRGEKFELLVDRTDQLSQQSFVFNRKSRKLRKVMWWRSMKMWVCLGCLGLLVIYLVISMACGFDFSSC 216
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|813206241|ref|XP_012210118.1| (hypothetical protein SPRG_14796 [Saprolegnia parasitica CBS 223.65] >gi|641524627|gb|KDO19185.1| hypothetical protein SPRG_14796 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 241.506 bits (615), Expect = 8.925e-77 Identity = 120/220 (54.55%), Postives = 156/220 (70.91%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNS-PDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC 268
M I+YALIARGK VL EYTA SGNFPTVTR+LL KIP +D K SYVYD HVFHY+V D +TYLCM D+ ++R PF +L+D+K RFLT YG + TAIAFAMN EF +++RQMDYFN+ P+ +Q LDDV++ M++N++ VL RGEK ELLVD+T L +F F R SR+LR M WR ++ ++ + L + +I L+ + ACGFDF C
Sbjct: 1 MPIVYALIARGKTVLAEYTASSGNFPTVTRVLLAKIPL-DDSKMSYVYDKHVFHYVVKDGITYLCMADNDFKRR--VPFQFLDDLKARFLTTYG-DRGRTAIAFAMNAEFQHVIQRQMDYFNANPEVDTVVQVQQTLDDVKDTMVENIEKVLGRGEKFELLVDRTDQLSQQSFVFNRKSRKLRKVMWWRSMKMWVCLGCLGLLVIYLVISMACGFDFSSC 216
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|299116962|emb|CBN75066.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 239.965 bits (611), Expect = 3.227e-76 Identity = 121/214 (56.54%), Postives = 156/214 (72.90%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNS-PDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACG 262
MTI+YALIARGK VL E+TA +GNFPTVTR+LL KIP E + SYV+DAHVFHYIV + +TYLCM D +Q R R PFA+L DIK +F +YG S HTA AF+MN EF+ IL+RQMD FNS P + ++++++DVR M++NVD VLERGEK+ELLVDKT L AF+F+R+SR LR M WR+++ + G+ V L+ A+ACG
Sbjct: 1 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPT-EATRMSYVWDAHVFHYIVENGVTYLCMAD--EQSRRRVPFAFLEDIKTKFGAQYG-ASIHTAPAFSMNAEFAPILQRQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACG 210
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|1214700589|gb|OWZ13143.1| (Vesicle-associated membrane protein [Phytophthora megakarya]) HSP 1 Score: 238.039 bits (606), Expect = 2.152e-75 Identity = 120/224 (53.57%), Postives = 163/224 (72.77%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNS-PDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC-GKR 271
M I+YAL++R K VL EYTA SGNFPTVTR+LL KIP DG+ SYVYD H+FHYIV +TYLCM DD ++R PF +L D+K+RF YG E A TAIAFAMN++F ++R +DY+N+ PDA + S ++ ++DDV+++M++N++ VL+RGEK ELLVD+T L + KFERSS QLR M R ++ +LL+ + + +I L+ + ACGFDF GC GKR
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIPTN-DGRMSYVYDRHIFHYIVEGGITYLCMADDDLKRR--VPFLFLEDMKNRFQAAYG-ERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSMWRRNVKLWLLLVFVGLFVIYLVISMACGFDFSGCSGKR 220
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|698804758|ref|XP_009835408.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574109402|gb|ETV74905.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 238.039 bits (606), Expect = 2.348e-75 Identity = 112/220 (50.91%), Postives = 155/220 (70.45%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFN-SPDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC 268
M I+YAL++RGK VL E+TA SGNFPTVTR+LL KIP ED K SYVYD H+FHY+V D +TYLCM D+ ++R PF +L D+K+RFL YG E TAIAFAMN EF +++RQM+Y+N SPD + +Q LDDV++ M++N++ VL+RGEK ELLVD+T L +F F R +++LR + WR ++ ++ + L + ++ + A ACGFD C
Sbjct: 1 MPIVYALVSRGKTVLAEFTASSGNFPTVTRVLLAKIP-TEDSKMSYVYDQHIFHYVVQDGITYLCMADNDFKRR--VPFQFLEDLKNRFLATYG-ERGQTAIAFAMNAEFQHVIQRQMEYYNASPDVDTVARVQQSLDDVKDAMVENIEKVLDRGEKFELLVDRTDKLSQQSFVFNRKAKKLRKTLWWRSVKMWVCLGVLGIGILYFVIAMACGFDLSAC 216
BLAST of EWM25971.1 vs. NCBI_GenBank
Match: gi|675162313|ref|XP_008890041.1| (hypothetical protein PPTG_00403 [Phytophthora parasitica INRA-310] >gi|567971916|gb|ETK96912.1| hypothetical protein L915_00462 [Phytophthora parasitica] >gi|568000236|gb|ETL50257.1| hypothetical protein L916_00466 [Phytophthora parasitica] >gi|568029396|gb|ETM03322.1| hypothetical protein L917_00437 [Phytophthora parasitica] >gi|568060037|gb|ETM56583.1| hypothetical protein L914_00461 [Phytophthora parasitica] >gi|568109306|gb|ETN23913.1| hypothetical protein PPTG_00403 [Phytophthora parasitica INRA-310] >gi|570337942|gb|ETO85890.1| hypothetical protein F444_00486 [Phytophthora parasitica P1976] >gi|570961985|gb|ETP26964.1| hypothetical protein F441_00489 [Phytophthora parasitica CJ01A1] >gi|570998803|gb|ETP54934.1| hypothetical protein F442_00479 [Phytophthora parasitica P10297] >gi|970648687|gb|KUF88158.1| Vesicle-associated membrane protein 7B [Phytophthora nicotianae]) HSP 1 Score: 237.269 bits (604), Expect = 3.592e-75 Identity = 120/224 (53.57%), Postives = 163/224 (72.77%), Query Frame = 0
Query: 50 MTILYALIARGKDVLCEYTAVSGNFPTVTRLLLGKIPRGEDGKRSYVYDAHVFHYIVADRLTYLCMTDDPQQKRFRAPFAYLNDIKDRFLTRYGRESAHTAIAFAMNEEFSGILKRQMDYFNS-PDAAASSALQAKLDDVRNVMIQNVDLVLERGEKLELLVDKTADLQHSAFKFERSSRQLRHEMLWRRIRCYLLITGLIVALILLISASACGFDFHGC-GKR 271
M I+YAL++R K VL EYTA SGNFPTVTR+LL KIP DG+ SYVYD H+FHYIV +TYLCM DD ++R PF +L D+K+RF YG E A TAIAFAMN++F ++R +DY+N+ PDA + S ++ ++DDV+++M++N++ VL+RGEK ELLVD+T L + KFERSS QLR M R ++ +LL+ + + +I L+ + ACGFDF GC GKR
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIP-PTDGRMSYVYDRHIFHYIVEGGVTYLCMADDDLKRR--VPFLFLEDMKNRFQAAYG-ERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSMWRRNVKLWLLLVTVGLFVIYLVISMACGFDFSGCSGKR 220 The following BLAST results are available for this feature:
BLAST of EWM25971.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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