EWM25970.1, cds4702 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|585107864|gb|EWM25970.1| (atp-dependent rna helicase ddx42, partial [Nannochloropsis gaditana]) HSP 1 Score: 1640.55 bits (4247), Expect = 0.000e+0 Identity = 824/824 (100.00%), Postives = 824/824 (100.00%), Query Frame = 0
Query: 1 MNFRRPGGQAYRPTSSNRNAGNPFASKNDPSGSNAGAGSTVRASQQSQSVKDWFDDEDEEGDGRGKRRGAPSGLGIGGEEEEDPIDAFIKEQQGSCHQGKNGALNDSSKAVSSTPGPEKEEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGRGGGHGGGRGGGQGGGRGGGRGGGRSGSREDFRFAKPPASYKVTAGIGFGGGGGGEGGGGGGGGGGGGGRGRGAMMSSFVRQQEDFRTVRGDGGGEGEGREEGGGGGGRRREG 824
MNFRRPGGQAYRPTSSNRNAGNPFASKNDPSGSNAGAGSTVRASQQSQSVKDWFDDEDEEGDGRGKRRGAPSGLGIGGEEEEDPIDAFIKEQQGSCHQGKNGALNDSSKAVSSTPGPEKEEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGRGGGHGGGRGGGQGGGRGGGRGGGRSGSREDFRFAKPPASYKVTAGIGFGGGGGGEGGGGGGGGGGGGGRGRGAMMSSFVRQQEDFRTVRGDGGGEGEGREEGGGGGGRRREG
Sbjct: 1 MNFRRPGGQAYRPTSSNRNAGNPFASKNDPSGSNAGAGSTVRASQQSQSVKDWFDDEDEEGDGRGKRRGAPSGLGIGGEEEEDPIDAFIKEQQGSCHQGKNGALNDSSKAVSSTPGPEKEEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGRGGGHGGGRGGGQGGGRGGGRGGGRSGSREDFRFAKPPASYKVTAGIGFGGGGGGEGGGGGGGGGGGGGRGRGAMMSSFVRQQEDFRTVRGDGGGEGEGREEGGGGGGRRREG 824
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|255548421|ref|XP_002515267.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Ricinus communis] >gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]) HSP 1 Score: 513.457 bits (1321), Expect = 2.813e-167 Identity = 279/614 (45.44%), Postives = 377/614 (61.40%), Query Frame = 0
Query: 116 GPEKEEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGED------DADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGRGGGHGGGRGGG 723
G E+ +++DPLDAFM G+ H P A ++ E R++E+ ++ + +++ G A YDSD EVYAA A +A + DD + L +K +E +PPLDH+ + Y PF K FY E P ++ M +++ YR+ L ++V G + RPI SF+ + FS L+ I+K+G++ PT IQ QALP+ L+GRD++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIY+EA KF+K HG RV+AV+GG K EQ K LKAG +I++ATPGRL++ LK KA N+ + T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DPIR+ G G ANED+ Q V V+P + K WLF+K +++ G VLVF S K +++ +L + G++V LHGDKDQ+ R I+++FK G VL+ATDVA+RGLDIK +++VVN+D+AR M+ HVHR GRTGR G + GTAYTL+T K+A AGELV L A Q V L + GR R G
Sbjct: 65 GAEENDEIDPLDAFMEGI---------HEEMKAAPPP-----KAKDKAEKYRDDEDDNDPMESFLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGLLEYDSDDNPVVL------------DRKKIEPIPPLDHSLIDYEPFNKDFYEEKPSISGMSEQDVAEYRKS-LAIRVSGFDVPRPIKSFEDCS-FSMQLMNAIVKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFSKSHGIRVSAVYGGMSKLEQFKELKAGCDIVVATPGRLIDLLKMKALNMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDAEKLPWLFEKLPGMIDDGDVLVFASKKATVDEIESQL----------AQKGFKVAALHGDKDQASRMEILQKFK----------------SGVYHVLIATDVAARGLDIKSLKSVVNFDIARDMDMHVHRIGRTGR----AGDKDGTAYTLITQKEARFAGELVNSLIAAGQNVSGELMDLAMKDGRFRSKRDARKGA 620
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|1109245605|ref|XP_019197538.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Ipomoea nil]) HSP 1 Score: 507.294 bits (1305), Expect = 3.298e-165 Identity = 277/593 (46.71%), Postives = 371/593 (62.56%), Query Frame = 0
Query: 120 EEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
++++DPLDAFM G+ EE EK LD+ + E+ E +++ G ++ +A Y+SD EVYAA A +A + DD + L KK +E +P LDH+S+ Y PF K FY E+P ++ M ++++ YR L ++V G + RP+ +F+ GFS LL+ I K+ ++ PTPIQ QALP+AL+G D++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIYVE KFAK HG RV+AV+GG K EQ K LKAG EI++ATPGRL++ L+ KA + R T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DP+R+ G G ANED+ Q V V+P + K WL +K L++ G VLVF S K +++ +L M G++V LHGDKDQ+ R +++FK G VL+ATDVA+RGLDIK +++VVN+D+A+ M+ HVHR GRTGR G + GTAYTL+T K+A AGELV L A Q VP L + GR
Sbjct: 76 DDEIDPLDAFMEGIH---EEMKAAPPPKPKEK---LDKYKDDIEDDPMESFLKAKKDIGLQLAAEAL---NAGYNSDEEVYAAAKAVDAGLVEYDSDDNPIIL------------DKKKIEPIPALDHSSIDYEPFNKDFYEENPSISGMSEQDVIEYRNS-LAIRVSGFDVPRPVKTFEDC-GFSVELLKAISKQAYEKPTPIQCQALPIALSGGDIIGIAKTGSGKTAAFVLPLMVHIMDQPELEKEEGPIGVICAPTRELAHQIYVETKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLRMKAVTMTRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEIGMANEDITQVVQVIPSDAEKLPWLLEKLPGLIDDGDVLVFASKKATVDEIESQLAQM----------GFKVAALHGDKDQASRMETLQKFK----------------SGIYHVLIATDVAARGLDIKSIKSVVNFDVAKDMDMHVHRIGRTGR----AGDKDGTAYTLITQKEARFAGELVNSLITAGQNVPAELMDLAMKDGR 615
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|147821303|emb|CAN74586.1| (hypothetical protein VITISV_041989 [Vitis vinifera]) HSP 1 Score: 505.368 bits (1300), Expect = 2.319e-164 Identity = 275/600 (45.83%), Postives = 366/600 (61.00%), Query Frame = 0
Query: 123 VDPLDAFMVGVQS--------KVEEEARHTTEAGVEKPV--FLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
+DPLDAFM G+ KV E+A + + P+ FL A+++ G+ + G YDSD EVYAA A +A + DD + L KK +E +P LDH+S+ Y PF K FY E ++ M +++ YR+ L ++V G + RPI +F+ GFS L+ I K+G++ PTPIQ QA P+ L+GRD++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIY+E+ KFAKP+G RV+A++GG K EQ K LK+G EI+IATPGRL++ +K KA + R T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DP+R+ G G ANED+ Q V V+P + K WL K +++ G VLVF S K +++ +L G ++ LHGDKDQ+ R I+++FK G VL+ATDVA+RGLDIK +++VVN+D+AR M+AHVHR GRTGR G + GTAYTL+T K+A AGELV L A Q VP L + GR
Sbjct: 75 IDPLDAFMEGIHEEMRAPPPPKVVEKAEKYVDDDEDDPMESFL---RAKKDTGLALAADVMHAG----------------YDSDEEVYAAAKAVDAGLIEYDSDDNPIVL------------DKKKIEPIPALDHSSIEYEPFNKDFYEEKDSISGMTEQDVTEYRKS-LSIRVSGFDVPRPIKTFEDC-GFSPQLMNAITKQGYEKPTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKEEGPIGVICAPTRELAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGRLIDMIKMKALTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWLLDKLPGMIDDGDVLVFASKKATVDEIESQL----------GQKGLKIAALHGDKDQASRMDILQKFK----------------SGIYHVLIATDVAARGLDIKSIKSVVNFDIARDMDAHVHRIGRTGR----AGDKDGTAYTLITHKEARFAGELVGSLIAAGQNVPMELMDLAMKDGR 611
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|225437591|ref|XP_002277419.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera] >gi|297743992|emb|CBI36962.3| unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 504.212 bits (1297), Expect = 5.244e-164 Identity = 276/590 (46.78%), Postives = 362/590 (61.36%), Query Frame = 0
Query: 123 VDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
+DPLDAFM G+ EE VEK E +++E E + D G A YDSD EVYAA A +A + DD + L KK +E +P LDH+S+ Y PF K FY E ++ M +++ YR+ L ++V G + RPI +F+ GFS L+ I K+G++ PTPIQ QA P+ L+GRD++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIY+E+ KFAKP+G RV+A++GG K EQ K LK+G EI+IATPGRL++ +K KA + R T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DP+R+ G G ANED+ Q V V+P + K WL K +++ G VLVF S K +++ +L G ++ LHGDKDQ+ R I+++FK G VL+ATDVA+RGLDIK +++VVN+D+AR M+AHVHR GRTGR G + GTAYTL+T K+A AGELV L A Q VP L + GR
Sbjct: 75 IDPLDAFMEGIH---EEMRAPPPPKLVEKA----EKYVDDDEDDPMESFLRAKKDTGLALAADVMH--AGYDSDEEVYAAAKAVDAGLIEYDSDDNPIVL------------DKKKIEPIPALDHSSIEYEPFNKDFYEEKDSISGMTEQDVTEYRKS-LSIRVSGFDVPRPIKTFEDC-GFSPQLMNAITKQGYEKPTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKEEGPIGVICAPTRELAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGRLIDMIKMKALTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWLLDKLPGMIDDGDVLVFASKKATVDEIESQL----------GQKGLKIAALHGDKDQASRMDILQKFK----------------SGIYHVLIATDVAARGLDIKSIKSVVNFDIARDMDAHVHRIGRTGR----AGDKDGTAYTLITHKEARFAGELVGSLIAAGQNVPMELMDLAMKDGR 611
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|527198632|gb|EPS66709.1| (hypothetical protein M569_08067 [Genlisea aurea]) HSP 1 Score: 503.442 bits (1295), Expect = 5.873e-164 Identity = 268/596 (44.97%), Postives = 373/596 (62.58%), Query Frame = 0
Query: 120 EEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGV---REEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
EE++DPLDA+M G++ +++ + +K + D+ + E +++ D + A Y+SD EVYA A +A + DD + + K+ +E +PPLDH+S+ Y F K FY E P ++ M+ +++ YR+ L +++ G + RP+ F+ GFS L++ I K+ ++ PTPIQ QALP+ L+GRD++GIA+TGSGKT +FV P +VH+MDQPE+ K EGPI +I APTRELA QIY+EA KF+K HG RVAAV+GG K +Q K LKAG EI++ATPGRL++ +K KA + R T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DP+R+ G G ANED+ Q V V+ +E K WL +K +++AG LVF S K ++ L + L++R G++V LHGDKDQ+ R I++RFK G VL+ATDVA+RGLDIK +++VVN+D+A+ M+ HVHR GRTGR G + GTAYTL+T K+A AGELV L A Q+VP L + GR
Sbjct: 67 EEEIDPLDAYMNGLEEEIKAAPPPKAKEKFDK--YKDDAEDDPMESFLMAKKDVALQLAADALH----------AGYNSDEEVYAVAKAVDAGMIDYDSDDNPIVM------------DKRKIEPIPPLDHSSIDYEAFNKDFYEEKPSISGMNDQDVAEYRKG-LSIRISGFDVPRPVKKFEDC-GFSAELMKAIAKQTYENPTPIQCQALPIVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELAKEEGPIGVICAPTRELAHQIYLEAKKFSKVHGIRVAAVYGGMSKLDQFKELKAGCEIVVATPGRLIDMIKMKALTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVQVISSDEEKLPWLIEKLPGMIDAGDALVFASKKAAVDE----LESQLLQR------GFKVAALHGDKDQASRMEILQRFK----------------SGTYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGR----AGDKDGTAYTLITSKEARFAGELVNSLIAAGQDVPQELMDLAMKDGR 606
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|1009148011|ref|XP_015891717.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Ziziphus jujuba]) HSP 1 Score: 504.597 bits (1298), Expect = 6.004e-164 Identity = 285/609 (46.80%), Postives = 370/609 (60.76%), Query Frame = 0
Query: 105 NDSSKAVSSTPGPEKE-EDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
ND+SK E E++DPLDAFM G+ EE R A KPV E ++EE E + D G A YDSD EVYAA A +A + DD + L KK +E +P LDH+S+ Y PF K FY E ++ M ++ YR+ L ++V G + RPI++F+ GFS L+ I K+ ++ PTPIQ QALP+ L+G D++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIY+E+ KFAK HG RV+AV+GG K EQ K LKAG EI++ATPGRL++ LK KA + R T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DP+R+ G G ANED+ Q V V+P + K WL +K +++ G VLVF S K +++ T L +R ++V LHGDKDQ+ R +++FK G VL+ATDVA+RGLDIK +++VVN+D+AR M+ HVHR GRTGR G + GTAYTL+T K+A AGELV L A Q V L + GR
Sbjct: 58 NDTSKDGGDNGNGGAENEEIDPLDAFMEGIH----EEMR---SAPPPKPVEKAEKYKDDEEDDPVESFLRAKKDLGLTLASDALH--AGYDSDQEVYAAAKAVDAGLLEYDSDDNPVVL------------DKKKIEPIPALDHSSIDYEPFNKDFYEEKDSISGMSEQDAAEYRKS-LSIRVSGFDVPRPIMTFEDC-GFSSQLMNAIKKQAYEKPTPIQCQALPIVLSGTDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLESKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMSRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPEMIDNGDVLVFASKKATVDEI----ETQLTQR------SFKVAALHGDKDQASRMETLQKFK----------------SGIYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGR----AGDKDGTAYTLITQKEARFAGELVNSLVAAGQNVSVELMDLAMKDGR 613
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|1002257538|ref|XP_015633092.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Oryza sativa Japonica Group] >gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24 >gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa Japonica Group] >gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group] >gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group] >gi|937908914|dbj|BAS83834.1| Os03g0308500 [Oryza sativa Japonica Group]) HSP 1 Score: 501.901 bits (1291), Expect = 4.264e-163 Identity = 272/593 (45.87%), Postives = 364/593 (61.38%), Query Frame = 0
Query: 120 EEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPVFLDETAAEEEEGVREEEEYSEEGDGGYISRRRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
EE++DPLDAFM +Q ++ + + A ++E E + D G A YDSD EVYAA A +A + DD + + KK +E +PPLDH+++ Y PF K FY E P V+ M +E+ Y + L ++V G + RPI SF GF L+ I K+G++ PT IQ QALP+ L+GRD++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI ++ APTRELA QIY+EA KFAKP+ RVAAV+GG K++Q K LKAG EI+IATPGRL++ LK KA +FR T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT KVE LAR++L DPIR+ G+ G ANED++Q V V+P + K WL +K +++ G VLVF + K +++ +L + G+ + LHGDKDQ+ R +++FK G VLVATDVA+RGLDIK ++ VVN+D+A+ M+ H+HR GRTGR G + GTAYTL+T K+ AGELV L A Q+VP+ L + GR
Sbjct: 65 EEEIDPLDAFMAEIQEEIRAPPPAPKPEALRR-------ADSDDEDDPVESFLRAKKDSGLALAADAMH--AGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVV------------DKKKIEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKS-LAIRVSGFDVPRPIKSFADC-GFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQL----------NQRGFRIAALHGDKDQASRMETLQKFK----------------SGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGR----AGDKDGTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKDGR 604
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|661879200|emb|CDP17060.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 501.516 bits (1290), Expect = 7.157e-163 Identity = 263/520 (50.58%), Postives = 339/520 (65.19%), Query Frame = 0
Query: 193 YDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
Y+SD EVYAA A +A + DD + L KK +E +P LDH+S+ Y PF K FY E ++ M +++ YR+ L V+V G + RP+ F+ GFS L++ I K+ ++ PTPIQ QALP+ L+GRD++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIYVEA KFAKPHG RV+AV+GG K +Q K LKAG EI++ATPGRL++ LK KA + R T+LVLDEADRMFDLGFE QI SV+GQIRPDRQ+L+FSAT RKVE LAR++L DPIR+ G G ANED+ Q V V+P + K WL +K L++ G VLVF S K +D L + L +R G++V LHGDKDQ+ R ++++FK G VL+ATDVA+RGLDIK +++VVN+D+A+ M+ HVHR GRTGR G + GTAYTL+T K+A AGELV L A Q V L + GR
Sbjct: 141 YNSDEEVYAAAKAVDAGLIEYDSDDNPILL------------DKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGMSEQDIADYRKS-LAVRVSGFDVPRPLKMFEDC-GFSAELMKAIAKQAYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKEEGPIGVICAPTRELAHQIYVEAKKFAKPHGIRVSAVYGGMSKLDQFKELKAGCEIVVATPGRLIDMLKMKALTMLRATYLVLDEADRMFDLGFEPQIRSVVGQIRPDRQTLLFSATMPRKVEKLAREILTDPIRVTVGEVGMANEDITQFVQVIPSDAEKLPWLLEKLPGLIDGGDVLVFASKKATVDD----LESQLAQR------GFKVAALHGDKDQASRVEVLQKFK----------------SGTYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGR----AGDKDGTAYTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGR 616
BLAST of EWM25970.1 vs. NCBI_GenBank
Match: gi|641868284|gb|KDO86968.1| (hypothetical protein CISIN_1g003881mg [Citrus sinensis]) HSP 1 Score: 501.13 bits (1289), Expect = 1.223e-162 Identity = 283/612 (46.24%), Postives = 379/612 (61.93%), Query Frame = 0
Query: 105 NDSSKAVSST-PGPEKEEDVDPLDAFMVGVQSKVEEEARHTTEAGVEKPV-FLDETAAEEEEGVREEEEYSEEGDGGYISR--RRPGEDDADYDSDAEVYAAGAAAEAAVAGKGGDDRALGLVPGKMYSRVGPEGKKAMESLPPLDHASMSYPPFRKCFYTEDPEVTAMDWEEMLRYREEELQVQVEGRESCRPIVSFKHATGFSETLLREIIKRGFQAPTPIQAQALPLALAGRDVLGIAQTGSGKTLAFVWPALVHLMDQPEVVKGEGPIVLILAPTRELASQIYVEALKFAKPHGARVAAVFGGAGKWEQSKLLKAGVEILIATPGRLLEHLKGKATNLFRCTFLVLDEADRMFDLGFESQIHSVLGQIRPDRQSLMFSATFKRKVENLARKVLRDPIRIVCGRAGQANEDVRQEVVVVPREEGKEEWLFQKFSSLVEAGKVLVFVSSKQGCEDVAGRLRTMLMRREGSSAGGWEVETLHGDKDQSERSLIMRRFKRQEEGGKEGGKEGGKEGGRCRVLVATDVASRGLDIKDVRNVVNYDMARSMEAHVHRCGRTGRMSVEGGREGGTAYTLLTPKDAGMAGELVKGLEGARQEVPDALRAMVRGGGR 712
ND++KA + T G EKEE +DPLDAFM G+ EE R A KP L+ ++EE E +++ G ++ R G YDSD EVYAA A +A + DD + + KK +E +P LDH+ + Y PF K FY + ++ M ++++ Y++ L ++V G + RP+ +F+ GFS L+ I K+G++ PT IQ QALP+ L+GRD++GIA+TGSGKT AFV P +VH+MDQPE+ K EGPI +I APTRELA QIY+E KFAK HG RV+AV+GG K +Q K LKAG EI+IATPGRL++ LK KA + R T+LVLDEADRMFDLGFE QI S++GQIRPDRQ+L+FSAT RKVE LAR++L DP+R+ G G ANED+ Q V V+P + K WL +K +++ G VLVF S K +++ +L + G++ LHGDKDQ+ R I+++FK G VL+ATDVA+RGLDIK +++VVN+D+AR M+ HVHR GRTGR G + GTAYTL+T K+A AGELV L A Q V L + GR
Sbjct: 56 NDAAKAANDTGNGAEKEE-IDPLDAFMEGIH----EEMR---AAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTLAADALRAG-----YDSDEEVYAAAKAVDAGMLDYDSDDNPVVV------------EKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKS-LAIRVSGFDVPRPVKTFEDC-GFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQL----------AQKGFKAAALHGDKDQASRMEILQKFK----------------SGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGR----AGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGR 610 The following BLAST results are available for this feature:
BLAST of EWM25970.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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