EWM25980.1, cds4681 (CDS) Nannochloropsis gaditana

Overview
NameEWM25980.1
Unique Namecds4681
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:86758..87072 +

Link to JBrowse

Properties
Property NameValue
Start range86758
Start range.
Protein idEWM25980.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100151g13.9614.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:86758..87072 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25980.1 vs. NCBI_GenBank
Match: gi|585107881|gb|EWM25980.1| (hypothetical protein Naga_100151g13, partial [Nannochloropsis gaditana])

HSP 1 Score: 197.593 bits (501), Expect = 6.711e-64
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query:    1 RKIPGFLRKQAQAFLRHQWEGGGRERRGEEAEGRTVSGGGGLGPTSVGKGDFGGKGRGWEGLGEGGGIMYMTVLIGPCGMNGNGKEGGWRRRGKRLYRQRRKTV 104
            RKIPGFLRKQAQAFLRHQWEGGGRERRGEEAEGRTVSGGGGLGPTSVGKGDFGGKGRGWEGLGEGGGIMYMTVLIGPCGMNGNGKEGGWRRRGKRLYRQRRKTV
Sbjct:    1 RKIPGFLRKQAQAFLRHQWEGGGRERRGEEAEGRTVSGGGGLGPTSVGKGDFGGKGRGWEGLGEGGGIMYMTVLIGPCGMNGNGKEGGWRRRGKRLYRQRRKTV 104          
The following BLAST results are available for this feature:
BLAST of EWM25980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107881|gb|EWM25980.1|6.711e-64100.00hypothetical protein Naga_100151g13, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4693rna4693Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications