EWM30278.1, cds468 (CDS) Nannochloropsis gaditana

Overview
NameEWM30278.1
Unique Namecds468
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1168767..1169378 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30278.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g7.1795.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1168767..1169378 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30278.1 vs. NCBI_GenBank
Match: gi|585112937|gb|EWM30278.1| (hypothetical protein Naga_100003g7 [Nannochloropsis gaditana])

HSP 1 Score: 411.379 bits (1056), Expect = 2.752e-145
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 
Query:    1 MPPEPPSARARLPWWWSLADTQGENVLAFLGAASFLTYVLHMPTVVRAVEEGKWGKVERFAGMVSGVLGVVSENDSLRMLADVAGMTEQLDGMWRDAQRVQGVLRDTTPEDIVAVLPASHIAGLVRRKRKRASRALKGQMRDILIWMRSNELPARVVYPLLTPLCVYATDALMGFEEDEHAGDEEEEEEQEVAGHLGLYEIGL 203
            MPPEPPSARARLPWWWSLADTQGENVLAFLGAASFLTYVLHMPTVVRAVEEGKWGKVERFAGMVSGVLGVVSENDSLRMLADVAGMTEQLDGMWRDAQRVQGVLRDTTPEDIVAVLPASHIAGLVRRKRKRASRALKGQMRDILIWMRSNELPARVVYPLLTPLCVYATDALMGFEEDEHAGDEEEEEEQEVAGHLGLYEIGL
Sbjct:    1 MPPEPPSARARLPWWWSLADTQGENVLAFLGAASFLTYVLHMPTVVRAVEEGKWGKVERFAGMVSGVLGVVSENDSLRMLADVAGMTEQLDGMWRDAQRVQGVLRDTTPEDIVAVLPASHIAGLVRRKRKRASRALKGQMRDILIWMRSNELPARVVYPLLTPLCVYATDALMGFEEDEHAGDEEEEEEQEVAGHLGLYEIGL 203
The following BLAST results are available for this feature:
BLAST of EWM30278.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112937|gb|EWM30278.1|2.752e-145100.00hypothetical protein Naga_100003g7 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna468rna468Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications