EWM26002.1, cds4672 (CDS) Nannochloropsis gaditana

Overview
NameEWM26002.1
Unique Namecds4672
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:57615..57708 +
Alignment locationCM002464.1:57998..58101 +
Alignment locationCM002464.1:58203..58329 +
Alignment locationCM002464.1:58471..58625 +
Alignment locationCM002464.1:58767..58778 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26002.1
Productmolybdopterin biosynthesis protein cnx1
Orig transcript idgnl|cribi|Naga_101094g2.10503.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:57615..57708 +
CM002464.1supercontigCM002464.1:57998..58101 +
CM002464.1supercontigCM002464.1:58203..58329 +
CM002464.1supercontigCM002464.1:58471..58625 +
CM002464.1supercontigCM002464.1:58767..58778 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0019538protein metabolic process
GO:0032324molybdopterin cofactor biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR005110MoeA_linker/N
Homology
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|585107914|gb|EWM26002.1| (molybdopterin biosynthesis protein cnx1 [Nannochloropsis gaditana])

HSP 1 Score: 330.487 bits (846), Expect = 1.157e-114
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MASTKTTSKSPAHAEAASRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKRRRLPSAF 163
            MASTKTTSKSPAHAEAASRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKRRRLPSAF
Sbjct:    1 MASTKTTSKSPAHAEAASRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKRRRLPSAF 163          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|299469862|emb|CBN76716.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 139.428 bits (350), Expect = 2.491e-35
Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 0
Query:   19 RLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEA-LGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEG 144
            RL+ER SP+PM+ VD+A+  VL+Q      + +SL +  LG VLA D+TAPEPLPPFPA+ MDGYAV + DG  V  V+GR+TAGVDPD+  + ++ G   YITTG KLPQGADAVVK+EDTA  +G
Sbjct:    9 RLRERESPFPMIPVDEAIGEVLKQATPLEAVTLSLADIPLGSVLAVDVTAPEPLPPFPASTMDGYAVVASDGEAVLEVVGRITAGVDPDS--IQVSSGQCAYITTGAKLPQGADAVVKVEDTAAVDG 133          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|703087461|ref|XP_010093278.1| (Molybdopterin biosynthesis protein CNX1 [Morus notabilis] >gi|587864102|gb|EXB53803.1| Molybdopterin biosynthesis protein CNX1 [Morus notabilis])

HSP 1 Score: 120.168 bits (300), Expect = 1.759e-28
Identity = 64/120 (53.33%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTRE 148
            MVSVD+AL MVL       P+ V L  ALG VLA+D+ AP+PLPP+PA+I DGYAV + DGPG +PV+    AG   DA G+ + PG   Y+TTG  +P GADAVV++EDT   EG + E
Sbjct:   19 MVSVDEALRMVLAVAQGLPPVTVPLHNALGMVLAEDVRAPDPLPPYPASIKDGYAVVAEDGPGEYPVVAEARAG--NDALGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKIEGSSLE 136          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1173960147|gb|OQS06305.1| (eukaryotic peptide chain release factor subunit 1 [Thraustotheca clavata])

HSP 1 Score: 119.398 bits (298), Expect = 3.516e-28
Identity = 64/135 (47.41%), Postives = 85/135 (62.96%), Query Frame = 0
Query:   18 SRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGRE 152
            S+  +R SP+ M  +  A+ +VL Q+       V L E LGCV+A+ I + EPLPPF A++MDGYAV + DG G FPV+ R+ AG   D+ G  ++ G+  Y+TTG  +P GADAVVKIEDT   EG   E G E
Sbjct:  426 SKGSKRNSPYDMFPMQKAIEIVLTQSQPLVKTLVPLHETLGCVIAETIKSKEPLPPFRASVMDGYAVVASDGVGQFPVLNRIAAG---DSPGSQVSSGFVAYVTTGCPVPDGADAVVKIEDT---EGVCHENGNE 554          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|255549605|ref|XP_002515854.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Ricinus communis] >gi|223545009|gb|EEF46523.1| molybdopterin biosynthesis protein, putative [Ricinus communis])

HSP 1 Score: 118.627 bits (296), Expect = 4.809e-28
Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 0
Query:   29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGR 151
            M+SV+DAL+ +L+      P+ V L +A G VLA+DI AP+PLPP+PA+I DGYAV + DGPG +PV+    AG   D  G+ + PG   Y+TTG  +P GADAVV++EDT   E G  E  R
Sbjct:   14 MISVEDALSTILKVAQRLQPITVPLHDAFGKVLAEDIRAPDPLPPYPASIKDGYAVVASDGPGEYPVITESRAG--NDGLGVTITPGTVAYVTTGGPIPDGADAVVQVEDTEKVEDGLVESKR 134          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|828296348|ref|XP_004491157.2| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Cicer arietinum])

HSP 1 Score: 117.857 bits (294), Expect = 1.179e-27
Identity = 63/123 (51.22%), Postives = 78/123 (63.41%), Query Frame = 0
Query:   29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGR 151
            M+SV DAL  VL  +    P+ V    ALG VLA D+TAP+PLPP+PA+I DGYAV + DGPG +PV+    AG   DA G+ L PG   Y+TTG  +P GADAVV++EDT     G  E  R
Sbjct:    1 MISVTDALQTVLNASKRLPPISVXXXXALGKVLAQDVTAPDPLPPYPASIKDGYAVIASDGPGEYPVIAESRAG--DDALGVTLIPGTVAYVTTGGPIPDGADAVVQVEDTEKVNNGEDESPR 121          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1009161267|ref|XP_015898806.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Ziziphus jujuba])

HSP 1 Score: 117.472 bits (293), Expect = 1.552e-27
Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 0
Query:   29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGR 151
            M+SVD+AL +VL+      P  V LQ+ALG VLA+DI AP+PLPP+PA+I DGYAV + DGPG +PV+    AG   D  G+ + PG   Y+TTG  +P GADAV+++EDT   E  + +  R
Sbjct:    1 MISVDEALQLVLRVAQRLPPETVPLQDALGKVLAEDIQAPDPLPPYPASIKDGYAVVASDGPGDYPVIAEARAG--NDGLGVTVTPGTVAYVTTGGPIPDGADAVIQVEDTEQIEDSSFQSKR 121          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|641828497|gb|KDO47645.1| (hypothetical protein CISIN_1g0059001mg, partial [Citrus sinensis] >gi|641828498|gb|KDO47646.1| hypothetical protein CISIN_1g0059001mg, partial [Citrus sinensis])

HSP 1 Score: 109.383 bits (272), Expect = 2.075e-27
Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 0
Query:   29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDT 139
            M+S ++AL  VL       P+ V L EALG VLA+DI AP+PLPP+PA++ DGYAV + DGPG +PV+    AG   D  G+I+  G   Y+TTG  +P GADAVV++EDT
Sbjct:   16 MISAEEALQKVLSVAQRLPPVTVPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVASDGPGEYPVITESRAG--NDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDT 124          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1176068683|ref|XP_020604198.1| (gephyrin-like [Orbicella faveolata])

HSP 1 Score: 116.316 bits (290), Expect = 3.404e-27
Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 0
Query:    2 ASTKTTSKSPAHAEAASRL-----KERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKR 156
             ST  T    AH +A   L     ++R SP+P+V +D+AL+M++  +P      ++L+E+LG +LA D+ A EP PPFPA++ DGYAV + DGPG   V+G +TAG   +     +  G+   ITTG  LP GADAVV++EDT   E    EG  EKR +
Sbjct:  179 VSTHHTCPHKAHGKAIRDLSRVAERDRYSPYPLVPMDEALSMIMANSPCLPQKVITLEESLGFILASDVFAKEPFPPFPASVKDGYAVLASDGPGERLVLGPVTAG---EVTACSVTSGHVMRITTGAPLPPGADAVVQVEDTELLESDN-EGRTEKRIK 334          
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1109248890|ref|XP_019199193.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 isoform X2 [Ipomoea nil])

HSP 1 Score: 116.316 bits (290), Expect = 3.571e-27
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 0
Query:   29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDT 139
            MVS ++AL +VL       P+ V L +ALG VLA+DITAP+PLPP+PA+I DGYAV S DGPGV+P++    AG   D  G+++ PG   Y+TTG  +P GADAVV++E+T
Sbjct:   12 MVSSNEALEIVLSVAQRLPPVSVPLHQALGRVLAEDITAPDPLPPYPASIKDGYAVVSSDGPGVYPIITESRAG--NDGLGVVVTPGTVAYVTTGGPIPDGADAVVQVENT 120          
The following BLAST results are available for this feature:
BLAST of EWM26002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107914|gb|EWM26002.1|1.157e-114100.00molybdopterin biosynthesis protein cnx1 [Nannochlo... [more]
gi|299469862|emb|CBN76716.1|2.491e-3558.27conserved unknown protein [Ectocarpus siliculosus][more]
gi|703087461|ref|XP_010093278.1|1.759e-2853.33Molybdopterin biosynthesis protein CNX1 [Morus not... [more]
gi|1173960147|gb|OQS06305.1|3.516e-2847.41eukaryotic peptide chain release factor subunit 1 ... [more]
gi|255549605|ref|XP_002515854.1|4.809e-2849.59PREDICTED: molybdopterin biosynthesis protein CNX1... [more]
gi|828296348|ref|XP_004491157.2|1.179e-2751.22PREDICTED: molybdopterin biosynthesis protein CNX1... [more]
gi|1009161267|ref|XP_015898806.1|1.552e-2749.59PREDICTED: molybdopterin biosynthesis protein CNX1... [more]
gi|641828497|gb|KDO47645.1|2.075e-2751.35hypothetical protein CISIN_1g0059001mg, partial [C... [more]
gi|1176068683|ref|XP_020604198.1|3.404e-2742.50gephyrin-like [Orbicella faveolata][more]
gi|1109248890|ref|XP_019199193.1|3.571e-2753.15PREDICTED: molybdopterin biosynthesis protein CNX1... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4684rna4684Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications