EWM26002.1, cds4672 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|585107914|gb|EWM26002.1| (molybdopterin biosynthesis protein cnx1 [Nannochloropsis gaditana]) HSP 1 Score: 330.487 bits (846), Expect = 1.157e-114 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query: 1 MASTKTTSKSPAHAEAASRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKRRRLPSAF 163
MASTKTTSKSPAHAEAASRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKRRRLPSAF
Sbjct: 1 MASTKTTSKSPAHAEAASRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKRRRLPSAF 163
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|299469862|emb|CBN76716.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 139.428 bits (350), Expect = 2.491e-35 Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 0
Query: 19 RLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEA-LGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEG 144
RL+ER SP+PM+ VD+A+ VL+Q + +SL + LG VLA D+TAPEPLPPFPA+ MDGYAV + DG V V+GR+TAGVDPD+ + ++ G YITTG KLPQGADAVVK+EDTA +G
Sbjct: 9 RLRERESPFPMIPVDEAIGEVLKQATPLEAVTLSLADIPLGSVLAVDVTAPEPLPPFPASTMDGYAVVASDGEAVLEVVGRITAGVDPDS--IQVSSGQCAYITTGAKLPQGADAVVKVEDTAAVDG 133
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|703087461|ref|XP_010093278.1| (Molybdopterin biosynthesis protein CNX1 [Morus notabilis] >gi|587864102|gb|EXB53803.1| Molybdopterin biosynthesis protein CNX1 [Morus notabilis]) HSP 1 Score: 120.168 bits (300), Expect = 1.759e-28 Identity = 64/120 (53.33%), Postives = 81/120 (67.50%), Query Frame = 0
Query: 29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTRE 148
MVSVD+AL MVL P+ V L ALG VLA+D+ AP+PLPP+PA+I DGYAV + DGPG +PV+ AG DA G+ + PG Y+TTG +P GADAVV++EDT EG + E
Sbjct: 19 MVSVDEALRMVLAVAQGLPPVTVPLHNALGMVLAEDVRAPDPLPPYPASIKDGYAVVAEDGPGEYPVVAEARAG--NDALGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKIEGSSLE 136
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1173960147|gb|OQS06305.1| (eukaryotic peptide chain release factor subunit 1 [Thraustotheca clavata]) HSP 1 Score: 119.398 bits (298), Expect = 3.516e-28 Identity = 64/135 (47.41%), Postives = 85/135 (62.96%), Query Frame = 0
Query: 18 SRLKERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGRE 152
S+ +R SP+ M + A+ +VL Q+ V L E LGCV+A+ I + EPLPPF A++MDGYAV + DG G FPV+ R+ AG D+ G ++ G+ Y+TTG +P GADAVVKIEDT EG E G E
Sbjct: 426 SKGSKRNSPYDMFPMQKAIEIVLTQSQPLVKTLVPLHETLGCVIAETIKSKEPLPPFRASVMDGYAVVASDGVGQFPVLNRIAAG---DSPGSQVSSGFVAYVTTGCPVPDGADAVVKIEDT---EGVCHENGNE 554
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|255549605|ref|XP_002515854.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Ricinus communis] >gi|223545009|gb|EEF46523.1| molybdopterin biosynthesis protein, putative [Ricinus communis]) HSP 1 Score: 118.627 bits (296), Expect = 4.809e-28 Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 0
Query: 29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGR 151
M+SV+DAL+ +L+ P+ V L +A G VLA+DI AP+PLPP+PA+I DGYAV + DGPG +PV+ AG D G+ + PG Y+TTG +P GADAVV++EDT E G E R
Sbjct: 14 MISVEDALSTILKVAQRLQPITVPLHDAFGKVLAEDIRAPDPLPPYPASIKDGYAVVASDGPGEYPVITESRAG--NDGLGVTITPGTVAYVTTGGPIPDGADAVVQVEDTEKVEDGLVESKR 134
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|828296348|ref|XP_004491157.2| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Cicer arietinum]) HSP 1 Score: 117.857 bits (294), Expect = 1.179e-27 Identity = 63/123 (51.22%), Postives = 78/123 (63.41%), Query Frame = 0
Query: 29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGR 151
M+SV DAL VL + P+ V ALG VLA D+TAP+PLPP+PA+I DGYAV + DGPG +PV+ AG DA G+ L PG Y+TTG +P GADAVV++EDT G E R
Sbjct: 1 MISVTDALQTVLNASKRLPPISVXXXXALGKVLAQDVTAPDPLPPYPASIKDGYAVIASDGPGEYPVIAESRAG--DDALGVTLIPGTVAYVTTGGPIPDGADAVVQVEDTEKVNNGEDESPR 121
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1009161267|ref|XP_015898806.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Ziziphus jujuba]) HSP 1 Score: 117.472 bits (293), Expect = 1.552e-27 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGR 151
M+SVD+AL +VL+ P V LQ+ALG VLA+DI AP+PLPP+PA+I DGYAV + DGPG +PV+ AG D G+ + PG Y+TTG +P GADAV+++EDT E + + R
Sbjct: 1 MISVDEALQLVLRVAQRLPPETVPLQDALGKVLAEDIQAPDPLPPYPASIKDGYAVVASDGPGDYPVIAEARAG--NDGLGVTVTPGTVAYVTTGGPIPDGADAVIQVEDTEQIEDSSFQSKR 121
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|641828497|gb|KDO47645.1| (hypothetical protein CISIN_1g0059001mg, partial [Citrus sinensis] >gi|641828498|gb|KDO47646.1| hypothetical protein CISIN_1g0059001mg, partial [Citrus sinensis]) HSP 1 Score: 109.383 bits (272), Expect = 2.075e-27 Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 0
Query: 29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDT 139
M+S ++AL VL P+ V L EALG VLA+DI AP+PLPP+PA++ DGYAV + DGPG +PV+ AG D G+I+ G Y+TTG +P GADAVV++EDT
Sbjct: 16 MISAEEALQKVLSVAQRLPPVTVPLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVASDGPGEYPVITESRAG--NDGIGVIVTSGTVAYVTTGGPIPDGADAVVQVEDT 124
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1176068683|ref|XP_020604198.1| (gephyrin-like [Orbicella faveolata]) HSP 1 Score: 116.316 bits (290), Expect = 3.404e-27 Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 0
Query: 2 ASTKTTSKSPAHAEAASRL-----KERRSPWPMVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDTAPPEGGTREGGREKRKR 156
ST T AH +A L ++R SP+P+V +D+AL+M++ +P ++L+E+LG +LA D+ A EP PPFPA++ DGYAV + DGPG V+G +TAG + + G+ ITTG LP GADAVV++EDT E EG EKR +
Sbjct: 179 VSTHHTCPHKAHGKAIRDLSRVAERDRYSPYPLVPMDEALSMIMANSPCLPQKVITLEESLGFILASDVFAKEPFPPFPASVKDGYAVLASDGPGERLVLGPVTAG---EVTACSVTSGHVMRITTGAPLPPGADAVVQVEDTELLESDN-EGRTEKRIK 334
BLAST of EWM26002.1 vs. NCBI_GenBank
Match: gi|1109248890|ref|XP_019199193.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 isoform X2 [Ipomoea nil]) HSP 1 Score: 116.316 bits (290), Expect = 3.571e-27 Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 0
Query: 29 MVSVDDALTMVLQQTPTSAPMQVSLQEALGCVLADDITAPEPLPPFPAAIMDGYAVCSCDGPGVFPVMGRLTAGVDPDAHGLILAPGYTCYITTGTKLPQGADAVVKIEDT 139
MVS ++AL +VL P+ V L +ALG VLA+DITAP+PLPP+PA+I DGYAV S DGPGV+P++ AG D G+++ PG Y+TTG +P GADAVV++E+T
Sbjct: 12 MVSSNEALEIVLSVAQRLPPVSVPLHQALGRVLAEDITAPDPLPPYPASIKDGYAVVSSDGPGVYPIITESRAG--NDGLGVVVTPGTVAYVTTGGPIPDGADAVVQVENT 120 The following BLAST results are available for this feature:
BLAST of EWM26002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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