EWM26005.1, cds4668 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|585107918|gb|EWM26005.1| (set domain protein [Nannochloropsis gaditana]) HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
Query: 1 MRNLCPRERGRRRTRGIVLVVVSAIVASTSSVLQAQALRHDHITSSATQNKKFLSCSFVSSLMLPFEPGRALGKSCTFLVKAHPGGGQRTSKEKGRRRGRNGDLSTTSSLSFPSPTRAAREVFPPYGEEHIQVEERLKKKPAHWPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDYG 299
MRNLCPRERGRRRTRGIVLVVVSAIVASTSSVLQAQALRHDHITSSATQNKKFLSCSFVSSLMLPFEPGRALGKSCTFLVKAHPGGGQRTSKEKGRRRGRNGDLSTTSSLSFPSPTRAAREVFPPYGEEHIQVEERLKKKPAHWPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDYG
Sbjct: 1 MRNLCPRERGRRRTRGIVLVVVSAIVASTSSVLQAQALRHDHITSSATQNKKFLSCSFVSSLMLPFEPGRALGKSCTFLVKAHPGGGQRTSKEKGRRRGRNGDLSTTSSLSFPSPTRAAREVFPPYGEEHIQVEERLKKKPAHWPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDYG 299
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|1072228881|gb|OEU13616.1| (SET domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 93.5893 bits (231), Expect = 3.216e-19 Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0
Query: 156 WAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDY 298
W SS G+ +K+ R + G+E+R I E +H L GQ G++A + F F+++GEY G V +Y ++ + + GVD+ GNE+R NHF I PN+ AY+ ELP ++VV + IA G E L Y
Sbjct: 64 WPRSSQGRKIKKRSARPFIHGVEIR-ILEDTHPLSGQCGLFAIQPFEQFEILGEYCGEVYEGDDGSEYATYLEDRNKKYA-----LGVDATREGNEMRFANHFTGIADEPNIIMKIAYVEELPRVMVVCKKDIAIGEEFLFKY 200
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|551636771|ref|XP_005821208.1| (hypothetical protein GUITHDRAFT_166263 [Guillardia theta CCMP2712] >gi|428165228|gb|EKX34228.1| hypothetical protein GUITHDRAFT_166263 [Guillardia theta CCMP2712]) HSP 1 Score: 93.5893 bits (231), Expect = 7.795e-19 Identity = 53/158 (33.54%), Postives = 85/158 (53.80%), Query Frame = 0
Query: 144 WPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQI--GPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDYG 299
WP+ + ++ A S G + + R LPG+ +++I + +H +GQ G++A+ F DV+GEY G++VP G+YV + + G P GVD+ + GNE+RMIN + + PN KF + L+V +R +A G E L+DYG
Sbjct: 48 WPAGLQYTHTPDLAGLSPGD--RRLIRMDYLPGVTIKKIDDRAHPAYGQNGLFASMEFTVGDVLGEYTGKIVPGHCGGNYVTRL-WNSGHDSDYFRP-GVDAEVMGNELRMINDYRSVPGATGPNCKFSRTTLRGYRAALIVAIRNVAPGEEFLLDYG 201
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|873240782|emb|CEL93070.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 86.6557 bits (213), Expect = 1.992e-17 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0
Query: 197 ATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDYG 299
A R + PF+V+GEY G +VPP+ G YV + QD+ S VD++ GNE+R +N + I PNV F + +I LP L+VV RP+A G E L DYG
Sbjct: 15 AARRWEPFEVLGEYTGYLVPPSRDGPYVCKLVQDEADWEAVS----VDASKAGNELRFVNDYRGISEQPNVSFSSCFIDGLPRTLLVVTRPVAFGEEFLADYG 113
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|873233086|emb|CEM04161.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-17 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0
Query: 197 ATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVLRPIAEGAEILIDYG 299
A R + PF+V+GEY G +VPP+ G YV + QD+ S VD++ GNE+R +N + I PNV F + +I LP L+VV RP+A G E L DYG
Sbjct: 15 AARRWEPFEVLGEYTGYLVPPSRDGPYVCKLVQDEADWEAVS----VDASKAGNELRFVNDYRGIAEQPNVTFSSCFIDGLPRTLLVVTRPVAFGEEFLADYG 113
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|551673010|ref|XP_005839261.1| (hypothetical protein GUITHDRAFT_102184 [Guillardia theta CCMP2712] >gi|428183423|gb|EKX52281.1| hypothetical protein GUITHDRAFT_102184 [Guillardia theta CCMP2712]) HSP 1 Score: 85.8853 bits (211), Expect = 2.093e-16 Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = 0
Query: 144 WPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVA-SIDQDDGRLPHGSSPWG--VDSALYGNEVRMINHFHQIGPVPNVKF------------------VTAYIAELPHILVVVLRPIAEGAEILIDYG 299
WP+ V + ++ W S + +E F L G++VR I H GQ G++A R + PF+V+GEY G V P D A D D + S+ W +D++ GNE R IN F + PN KF + +++ P ILVV+ R + E E+L+DYG
Sbjct: 32 WPTSVKYLKENDWDEISGSE--REWFCVTRLQGVQVRFIHHDGHPCKGQRGLFAIRVWEPFEVLGEYCGVVKVP---NDQEARQCDSDYAVAVYKSATWTPFIDASRAGNETRFINDFRGVAGSPNCKFSQVPSLQSVCHLLYELAALQSHVGGRPAILVVITRQVKEEEELLVDYG 203
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|514684386|ref|XP_004989773.1| (hypothetical protein PTSG_12820 [Salpingoeca rosetta] >gi|326432527|gb|EGD78097.1| hypothetical protein PTSG_12820 [Salpingoeca rosetta]) HSP 1 Score: 85.8853 bits (211), Expect = 5.162e-15 Identity = 54/168 (32.14%), Postives = 84/168 (50.00%), Query Frame = 0
Query: 139 KKPAHWPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVASIDQDDGRLP---HGSSPW-GVDSALYGNEVRMINHFHQIG--PVPNVKFVTAYI-AELPHILVVVLRPIAEGAEILIDYG 299
K P +WP++V ++ L W + + V ++R+ P IEVR I + H GQ GV+A + P + +G Y G V PA +Y +D + H W +D+A +GNE+R IN F I NV F Y + ++ + +R I+ G E+L+DYG
Sbjct: 1048 KIPRYWPADVHYTPVLLWGVPNVNDTLLSVTQQRVHPSIEVRPIRDRGHPCFGQLGVFAAKEIGPDEHIGFYTGMVREPAGASEY------NDSKYITELHMEGLWLDIDAAQFGNEMRFINDFRGIDEKKKANVAFKINYCGCGMKNMGITTMRSISVGEELLLDYG 1209
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|1091996870|ref|XP_018735522.1| (hypothetical protein AWJ20_1323 [Sugiyamaella lignohabitans] >gi|1026311171|gb|ANB13045.1| hypothetical protein AWJ20_1323 [Sugiyamaella lignohabitans]) HSP 1 Score: 75.485 bits (184), Expect = 7.059e-13 Identity = 57/174 (32.76%), Postives = 86/174 (49.43%), Query Frame = 0
Query: 140 KPAHWPSEVLF------SQKLKWAASSA-GQDVK-EVFRRRLLPG--IEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRV---VPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYIAELPHILVVVL-RPIAEGAEILIDYG 299
KP +WP ++F S+KL +A G DVK + R P +++++I +P H +GQ G++A R AP V +Y+G V DY +D+ G +D+ +G E RMIN + I PNVKF Y+ + V VL +PI+ G E+ I+YG
Sbjct: 5 KPKNWPEGLIFVTRNVYSKKLAADELAAIGHDVKKQATVRAQNPSNLVKIKKILDPKHPAYGQNGLFAARKLAPGSHVIDYLGYVHNSQDTDPTSDYDIQLDKQSGI--------AIDAQKWGTEARMINDYRGIQSKPNVKFDDHYVDGQLRVAVFVLNQPISAGDELCINYG 170
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|1023280040|gb|KZT74883.1| (hypothetical protein DAEQUDRAFT_720067 [Daedalea quercina L-15889]) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-11 Identity = 54/164 (32.93%), Postives = 81/164 (49.39%), Query Frame = 0
Query: 139 KKPAHWPSEVLFSQKLKWAASSAGQDVKEVFRRRLLPGIEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGRVVPPAVCGDYVAS-IDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYI--AELPHILVVVLRPIAEGAEILIDYG 299
K P HWP+++L+ + ++ +S V +R +L+ +R ITE SH HGQ+G++A + P + +Y+G V C D + S D R P G S G+D+ GNE R +N + I PN F EL + PI +G EIL+ YG
Sbjct: 2 KAPPHWPADILYITEQQYHSS-----VPAEYRLQLV----IRPITESSHPAHGQFGLFAVKRIPPRTHIVDYIGEV----HCDDRLGSDYDLSLYRTPAGFSV-GIDAQRMGNEARFVNDYRAIKSKPNAFFDERRTEGGELRMSVWSGSDPIKKGDEILVSYG 151
BLAST of EWM26005.1 vs. NCBI_GenBank
Match: gi|1063240763|gb|ODQ63619.1| (hypothetical protein NADFUDRAFT_53282 [Nadsonia fulvescens var. elongata DSM 6958]) HSP 1 Score: 70.0922 bits (170), Expect = 6.554e-11 Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 0
Query: 141 PAHWPSEVLFSQKLKWAASSAGQDVKEVFRRRLL-------PG--IEVRRITEPSHVLHGQYGVYATRAFAPFDVVGEYVGR---VVPPAVCGDYVASIDQDDGRLPHGSSPWGVDSALYGNEVRMINHFHQIGPVPNVKFVTAYI-AELPHILVVVLRPIAEGAEILIDYG 299
P +WPS V+++Q ++ S + ++ + R L P ++++ IT+PSH GQ+G++AT+ P + +Y+G V V DY ++D D G +D+A +G E RMIN + + PNV F + EL + V + I +G E+ + YG
Sbjct: 6 PTNWPSSVIYTQTNIYSKSFSPDQLQSLGRANLQKPLKPQPPAKLVKIKPITDPSHPACGQFGLFATQKLPPKSHIIDYLGYVHLVSESDVTSDYDITLDGDLGV--------AIDAAKWGCEARMINDYRGVKERPNVIFENRIVGGELRMAVWVGGKEIKKGEEVCVSYG 169 The following BLAST results are available for this feature:
BLAST of EWM26005.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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