EWM26003.1, cds4666 (CDS) Nannochloropsis gaditana

Overview
NameEWM26003.1
Unique Namecds4666
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:45848..46505 -

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Properties
Property NameValue
Start range45848
Start range.
Protein idEWM26003.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100499g6.1686.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:45848..46505 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26003.1 vs. NCBI_GenBank
Match: gi|585107916|gb|EWM26003.1| (hypothetical protein Naga_100499g6, partial [Nannochloropsis gaditana])

HSP 1 Score: 419.853 bits (1078), Expect = 3.444e-148
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 
Query:    1 MPPLCRARLPFWEGRRPVGTNLGLGLTPPSLPPSLPPSLPSSLPPSLPPSPLSISHNAPAFVQEREGCCFPTSHLLLFFLLSSFLFKEREDAFPYSLLLSFLPSSFLVKEREDAFPHPSSCQGGRRGRGGREEEAQREEEGRGGGERGSHERVGGQFCGPEEAFQRPDKGWRGGRARAEGSGRRKGRRGRKRGAGGALEWGPTQEAEQDRSAGEEGGRE 219
            MPPLCRARLPFWEGRRPVGTNLGLGLTPPSLPPSLPPSLPSSLPPSLPPSPLSISHNAPAFVQEREGCCFPTSHLLLFFLLSSFLFKEREDAFPYSLLLSFLPSSFLVKEREDAFPHPSSCQGGRRGRGGREEEAQREEEGRGGGERGSHERVGGQFCGPEEAFQRPDKGWRGGRARAEGSGRRKGRRGRKRGAGGALEWGPTQEAEQDRSAGEEGGRE
Sbjct:    1 MPPLCRARLPFWEGRRPVGTNLGLGLTPPSLPPSLPPSLPSSLPPSLPPSPLSISHNAPAFVQEREGCCFPTSHLLLFFLLSSFLFKEREDAFPYSLLLSFLPSSFLVKEREDAFPHPSSCQGGRRGRGGREEEAQREEEGRGGGERGSHERVGGQFCGPEEAFQRPDKGWRGGRARAEGSGRRKGRRGRKRGAGGALEWGPTQEAEQDRSAGEEGGRE 219
The following BLAST results are available for this feature:
BLAST of EWM26003.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107916|gb|EWM26003.1|3.444e-148100.00hypothetical protein Naga_100499g6, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4678rna4678Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications