EWM26012.1, cds4658 (CDS) Nannochloropsis gaditana

Overview
NameEWM26012.1
Unique Namecds4658
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:16733..17047 +
Alignment locationCM002464.1:17184..17735 +
Alignment locationCM002464.1:17836..18111 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26012.1
Productfatty acid hydroxylase-like protein
Orig transcript idgnl|cribi|Naga_100150g7.10688.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:16733..17047 +
CM002464.1supercontigCM002464.1:17184..17735 +
CM002464.1supercontigCM002464.1:17836..18111 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0006633fatty acid biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0005506iron ion binding
GO:0016491oxidoreductase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006694Fatty_acid_hydroxylase
Homology
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|585107927|gb|EWM26012.1| (fatty acid hydroxylase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 766.148 bits (1977), Expect = 0.000e+0
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0
Query:    1 MIYDLMPLQPLRHIQTSMWSSTVRTGPETPVASFILPTRPSLPFLLQHTVDPTSNFPRRPTTSTSWQVSTIASSQPVGNTYWTQQHLNSLSLVNTPGQTRKLIVPAGKKPAVDSHSISTLPVSAPRGSLPSQTSLLPSPKRLVDARQLPPSVVHQNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM 380
            MIYDLMPLQPLRHIQTSMWSSTVRTGPETPVASFILPTRPSLPFLLQHTVDPTSNFPRRPTTSTSWQVSTIASSQPVGNTYWTQQHLNSLSLVNTPGQTRKLIVPAGKKPAVDSHSISTLPVSAPRGSLPSQTSLLPSPKRLVDARQLPPSVVHQNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM
Sbjct:    1 MIYDLMPLQPLRHIQTSMWSSTVRTGPETPVASFILPTRPSLPFLLQHTVDPTSNFPRRPTTSTSWQVSTIASSQPVGNTYWTQQHLNSLSLVNTPGQTRKLIVPAGKKPAVDSHSISTLPVSAPRGSLPSQTSLLPSPKRLVDARQLPPSVVHQNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM 380          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|553185813|ref|XP_005854312.1| (fatty acid hydroxylase-like protein [Nannochloropsis gaditana CCMP526] >gi|422294751|gb|EKU22051.1| fatty acid hydroxylase-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 228.024 bits (580), Expect = 2.434e-71
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
Query:  271 ACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM 380
            +CILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAK+RRGSKGFPSKKGPM
Sbjct:   14 SCILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKKRRGSKGFPSKKGPM 123          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|219113697|ref|XP_002186432.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583282|gb|ACI65902.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 139.043 bits (349), Expect = 4.291e-35
Identity = 77/210 (36.67%), Postives = 110/210 (52.38%), Query Frame = 0
Query:  162 SVPRTLSAALWMFFTHPSIL---LILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERR 368
             +P+T+  AL +FF     L    ++  L  +VA R + S P        L+    +  IV W  QE  +H  LLHS  DW+GR++H  HH  P++H+SIDP  L+  W   A +     +P+PL  +    Y   GLFYEW+HF VHT+VR R    K +K+HH +HH +D R+W  FS P ID   GT P  +   K+   +   + R
Sbjct:   60 KIPKTVKDALRVFFFDAQHLGPPCVVASLFSIVAWRVNLSTPIG-----ILDGFCFVAAIVFWWFQEHVMHDKLLHSKIDWYGRKVHEAHHKKPYFHISIDPAPLILGWLLCAHLTLSFLLPKPLALSATLGYAGAGLFYEWSHFIVHTKVRFRPGFWKHMKSHHIRHHCIDSRYWLGFSVPAIDDLFGTNPTVQQIRKQTLDQDGDQTR 264          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|971512805|dbj|GAQ85400.1| (fatty acid hydroxylase [Klebsormidium nitens])

HSP 1 Score: 135.576 bits (340), Expect = 1.239e-32
Identity = 80/204 (39.22%), Postives = 109/204 (53.43%), Query Frame = 0
Query:  155 QNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSF-----SGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFV---PRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVP 350
            ++  T+  VPR L  A   F   PS+LL L  +A + A R  F      GP            ++++    W   EWFLH  LLHS+++WFGR IH +HH  PF+HVSID   LV +  ++    G+ F      PL  T   T + MGL YEW H+ VHT+V  R+ +G  IK  H  HHL D+R+W +F+ P ID  +GT P
Sbjct:  182 EDKKTESWVPRRLDEAAVHFLKQPSVLLSLAAIAAVAAARSRFPWRLADGP------------VIVIMAAWWAFFEWFLHAKLLHSNYNWFGRGIHKRHHEAPFHHVSIDGLDLVAI--SLVGFAGFCFALFGKSPLALTGTLTVYTMGLVYEWTHYLVHTKVPMRSYIGSMIKRAHVSHHLKDQRYWLSFTCPPIDVLMGTTP 371          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|551649621|ref|XP_005827595.1| (hypothetical protein GUITHDRAFT_44036, partial [Guillardia theta CCMP2712] >gi|428171700|gb|EKX40615.1| hypothetical protein GUITHDRAFT_44036, partial [Guillardia theta CCMP2712])

HSP 1 Score: 128.642 bits (322), Expect = 6.289e-32
Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 0
Query:  206 QIFLECSLVLLTIVG--WILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKE 353
            + F    L++L +V   W+ QEW+LH++LLHS F W+G+E H QHH L +Y+VSIDP  LV  W   A  L ++ +P  L  +    Y  MGL YE+ H+  HT+V P+  L +AIK HH KHH +DE  WFAFS   ID+ L T P+ E
Sbjct:   47 ETFDHLDLLVLALVCQFWMFQEWWLHKYLLHS-FKWWGQEYHHQHHLLDYYYVSIDPVWLVVSWFLAAFGLFYLLLPTDLCLSATFAYSAMGLLYEFCHYLAHTKVMPKNRLLRAIKLHHMKHHFVDEDSWFAFSGLYIDSLLKTAPSGE 195          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|397632132|gb|EJK70429.1| (hypothetical protein THAOC_08214 [Thalassiosira oceanica])

HSP 1 Score: 119.013 bits (297), Expect = 1.057e-26
Identity = 73/209 (34.93%), Postives = 105/209 (50.24%), Query Frame = 0
Query:  162 SVPRTLSAALWMFFTH----PSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPR----------TALGK---AIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKE 353
            +VP   S AL  FF      P ++L +CG A     RF  S   +    +   CS++      W +QE+F HR LLHS F W G+ IH  HH   ++HVS+DPP L+  W   A ++    +P  L  +    Y   GL YEW+H+ VHT+V+P             L K   +++ +H +HH +D+  WFAFS P +D +  T P  E
Sbjct:  100 AVPSKWSQALRRFFLEEIGPPLVVLSICGFA---YARFKLSSVFTVADTLIFTCSIMF-----WWIQEYFFHRVLLHSPFAWIGKSIHQNHHDKTYFHVSVDPPALILGWLFAAHLILKSILPWGLCLSATIGYAGAGLAYEWSHYIVHTKVKPTRIESSTNPVVATLSKYYSSMRDNHIRHHRIDDGNWFAFSVPAMDDAFYTNPRVE 300          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|552817952|ref|XP_005845073.1| (hypothetical protein CHLNCDRAFT_137370 [Chlorella variabilis] >gi|307104719|gb|EFN52971.1| hypothetical protein CHLNCDRAFT_137370 [Chlorella variabilis])

HSP 1 Score: 97.0561 bits (240), Expect = 2.647e-19
Identity = 76/192 (39.58%), Postives = 97/192 (50.52%), Query Frame = 0
Query:  160 DFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWV-FVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVP 350
            +  VPRTL  AL +FFTHPS LLIL  LAGL+A R          L    + ++      GW +QEW +H  LLHS  DW                VSID P +V  + A +  L W+ F    L  T    Y+ MGL YE+ H+ VHTR  P + L K I+ HH  HH  +E +W AF+ P +D   GT P
Sbjct:  103 EQEVPRTLPHALAVFFTHPSSLLILAALAGLLAWRCHLP------LHAAADGAVAACVAAGWAVQEWLIHNLLLHSERDW----------------VSIDDPPIVLAFMAASLALFWLAFGGSELAVTAAAAYYSMGLVYEFTHYIVHTRYLPTSRLAKRIRMHHLLHHTRNEAYWLAFTVPQVDQLFGTDP 272          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|551336705|ref|WP_022956134.1| (fatty acid hydroxylase [Perlucidibaca piscinae])

HSP 1 Score: 92.4337 bits (228), Expect = 3.545e-18
Identity = 70/221 (31.67%), Postives = 103/221 (46.61%), Query Frame = 0
Query:  164 PRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGR--------EIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVP-RPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPS 375
            P T S AL ++   P + +IL  + G+   RF+    S   L  F       L I  W + EW LHR +LH+     GR          H  HHA P+    +  P+ V V  A   +L    +P R +  + L  + +  L YEW H+ VHTR++PR+A  +A+  +H  HH   E +WF+F  P +D  LGT P          A+   ++RG +G  S
Sbjct:   15 PETFSGALAVYLRQPGVCVILVFVLGVAGWRFALGEWSVRDLAGFA------LAIAVWPVMEWLLHRHVLHARPWQLGRWRIDPDPAVKHRAHHAEPWRVRLVFLPVYVPVMLAPMLVLAVPLLPDRAVALSFLTGFGLAALNYEWTHWIVHTRIQPRSAYYQAVFRNHRLHHFRHEDYWFSFMLPALDRWLGTGPDAASVAPSGTARDL-DKRGGRGLSS 228          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|1180706274|ref|WP_084191439.1| (hypothetical protein [Algiphilus aromaticivorans])

HSP 1 Score: 89.3521 bits (220), Expect = 7.514e-17
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 0
Query:  177 HPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLH-SSFDWFGREI-------HAQHHALPFY-HVSIDPPLLVGVWGAIACILGWVFVPRP-LVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKK 363
            +PS  LI   +A  +  R S  G  ++      +  ++LL +  W   EWFLH+ LLH   ++ FGR +       H  HH  P+   + + PP +   +G +   LGW   P P L  + L  Y    L YEW HF VHTR++P+    + +   H  HH  +E++W+ F+   +D  LGT P  ++  +    + 
Sbjct:   48 YPSPRLIAGFIAIAIGLRASLGGWQTA------DALMLLLGVTVWPFLEWFLHKHLLHVKPWEIFGRRVDPDFARRHRAHHREPWRPELIVLPPYVHFTFGPLLLALGWWAAPDPALAMSALVGYGFAALNYEWTHFMVHTRIQPQNRYYQGLFRAHRMHHFRNEKYWYGFTLTSVDRMLGTGPDPDVTPRSEHCRD 238          
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|1097603426|emb|SFQ61191.1| (Fatty acid hydroxylase superfamily protein [Bacillus sp. cl95] >gi|1097614780|emb|SFA71111.1| Fatty acid hydroxylase superfamily protein [Bacillus sp. UNCCL13])

HSP 1 Score: 79.7221 bits (195), Expect = 7.541e-14
Identity = 63/209 (30.14%), Postives = 95/209 (45.45%), Query Frame = 0
Query:  174 FFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSS------FDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGW----VFVPRPLVWTV-LGTYWIMGLF-YEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGS 370
            FF H  I++I   L  L  G   F+G +       +   L L+ ++G++L E+F HRFL H        F    + +H  HH  P    +    L + +W +I   L +      +    +WTV  G   +  LF YEW H+  H  ++P+T  G+ IK  H  HH  +E +WF  S P  D   GT  AKE E + +   K  E++  
Sbjct:    8 FFFHFDIMIIFI-LLCLGIGFMFFTGIT------LIAAVLFLVGMLGFVLSEYFTHRFLFHLKAPKNPFFLKLLKRLHYDHHTYP----NDLKLLFLPLWYSIPNFLIFSSIVYLITHNFLWTVSFGMGLMTMLFIYEWKHYVAHRPIKPKTKFGQWIKKVHILHHYKNENYWFGVSNPFTDVIFGTF-AKEKEVETSHTVKDLEKKAK 204          
The following BLAST results are available for this feature:
BLAST of EWM26012.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107927|gb|EWM26012.1|0.000e+0100.00fatty acid hydroxylase-like protein [Nannochlorops... [more]
gi|553185813|ref|XP_005854312.1|2.434e-7198.18fatty acid hydroxylase-like protein [Nannochlorops... [more]
gi|219113697|ref|XP_002186432.1|4.291e-3536.67predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|971512805|dbj|GAQ85400.1|1.239e-3239.22fatty acid hydroxylase [Klebsormidium nitens][more]
gi|551649621|ref|XP_005827595.1|6.289e-3246.00hypothetical protein GUITHDRAFT_44036, partial [Gu... [more]
gi|397632132|gb|EJK70429.1|1.057e-2634.93hypothetical protein THAOC_08214 [Thalassiosira oc... [more]
gi|552817952|ref|XP_005845073.1|2.647e-1939.58hypothetical protein CHLNCDRAFT_137370 [Chlorella ... [more]
gi|551336705|ref|WP_022956134.1|3.545e-1831.67fatty acid hydroxylase [Perlucidibaca piscinae][more]
gi|1180706274|ref|WP_084191439.1|7.514e-1729.95hypothetical protein [Algiphilus aromaticivorans][more]
gi|1097603426|emb|SFQ61191.1|7.541e-1430.14Fatty acid hydroxylase superfamily protein [Bacill... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4670rna4670Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications