EWM26012.1, cds4658 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|585107927|gb|EWM26012.1| (fatty acid hydroxylase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 766.148 bits (1977), Expect = 0.000e+0 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0 Query: 1 MIYDLMPLQPLRHIQTSMWSSTVRTGPETPVASFILPTRPSLPFLLQHTVDPTSNFPRRPTTSTSWQVSTIASSQPVGNTYWTQQHLNSLSLVNTPGQTRKLIVPAGKKPAVDSHSISTLPVSAPRGSLPSQTSLLPSPKRLVDARQLPPSVVHQNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM 380 MIYDLMPLQPLRHIQTSMWSSTVRTGPETPVASFILPTRPSLPFLLQHTVDPTSNFPRRPTTSTSWQVSTIASSQPVGNTYWTQQHLNSLSLVNTPGQTRKLIVPAGKKPAVDSHSISTLPVSAPRGSLPSQTSLLPSPKRLVDARQLPPSVVHQNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM Sbjct: 1 MIYDLMPLQPLRHIQTSMWSSTVRTGPETPVASFILPTRPSLPFLLQHTVDPTSNFPRRPTTSTSWQVSTIASSQPVGNTYWTQQHLNSLSLVNTPGQTRKLIVPAGKKPAVDSHSISTLPVSAPRGSLPSQTSLLPSPKRLVDARQLPPSVVHQNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM 380
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|553185813|ref|XP_005854312.1| (fatty acid hydroxylase-like protein [Nannochloropsis gaditana CCMP526] >gi|422294751|gb|EKU22051.1| fatty acid hydroxylase-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.024 bits (580), Expect = 2.434e-71 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 Query: 271 ACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPSKKGPM 380 +CILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAK+RRGSKGFPSKKGPM Sbjct: 14 SCILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKKRRGSKGFPSKKGPM 123
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|219113697|ref|XP_002186432.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583282|gb|ACI65902.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.043 bits (349), Expect = 4.291e-35 Identity = 77/210 (36.67%), Postives = 110/210 (52.38%), Query Frame = 0 Query: 162 SVPRTLSAALWMFFTHPSIL---LILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERR 368 +P+T+ AL +FF L ++ L +VA R + S P L+ + IV W QE +H LLHS DW+GR++H HH P++H+SIDP L+ W A + +P+PL + Y GLFYEW+HF VHT+VR R K +K+HH +HH +D R+W FS P ID GT P + K+ + + R Sbjct: 60 KIPKTVKDALRVFFFDAQHLGPPCVVASLFSIVAWRVNLSTPIG-----ILDGFCFVAAIVFWWFQEHVMHDKLLHSKIDWYGRKVHEAHHKKPYFHISIDPAPLILGWLLCAHLTLSFLLPKPLALSATLGYAGAGLFYEWSHFIVHTKVRFRPGFWKHMKSHHIRHHCIDSRYWLGFSVPAIDDLFGTNPTVQQIRKQTLDQDGDQTR 264
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|971512805|dbj|GAQ85400.1| (fatty acid hydroxylase [Klebsormidium nitens]) HSP 1 Score: 135.576 bits (340), Expect = 1.239e-32 Identity = 80/204 (39.22%), Postives = 109/204 (53.43%), Query Frame = 0 Query: 155 QNLATDFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSF-----SGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFV---PRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVP 350 ++ T+ VPR L A F PS+LL L +A + A R F GP ++++ W EWFLH LLHS+++WFGR IH +HH PF+HVSID LV + ++ G+ F PL T T + MGL YEW H+ VHT+V R+ +G IK H HHL D+R+W +F+ P ID +GT P Sbjct: 182 EDKKTESWVPRRLDEAAVHFLKQPSVLLSLAAIAAVAAARSRFPWRLADGP------------VIVIMAAWWAFFEWFLHAKLLHSNYNWFGRGIHKRHHEAPFHHVSIDGLDLVAI--SLVGFAGFCFALFGKSPLALTGTLTVYTMGLVYEWTHYLVHTKVPMRSYIGSMIKRAHVSHHLKDQRYWLSFTCPPIDVLMGTTP 371
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|551649621|ref|XP_005827595.1| (hypothetical protein GUITHDRAFT_44036, partial [Guillardia theta CCMP2712] >gi|428171700|gb|EKX40615.1| hypothetical protein GUITHDRAFT_44036, partial [Guillardia theta CCMP2712]) HSP 1 Score: 128.642 bits (322), Expect = 6.289e-32 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 0 Query: 206 QIFLECSLVLLTIVG--WILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKE 353 + F L++L +V W+ QEW+LH++LLHS F W+G+E H QHH L +Y+VSIDP LV W A L ++ +P L + Y MGL YE+ H+ HT+V P+ L +AIK HH KHH +DE WFAFS ID+ L T P+ E Sbjct: 47 ETFDHLDLLVLALVCQFWMFQEWWLHKYLLHS-FKWWGQEYHHQHHLLDYYYVSIDPVWLVVSWFLAAFGLFYLLLPTDLCLSATFAYSAMGLLYEFCHYLAHTKVMPKNRLLRAIKLHHMKHHFVDEDSWFAFSGLYIDSLLKTAPSGE 195
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|397632132|gb|EJK70429.1| (hypothetical protein THAOC_08214 [Thalassiosira oceanica]) HSP 1 Score: 119.013 bits (297), Expect = 1.057e-26 Identity = 73/209 (34.93%), Postives = 105/209 (50.24%), Query Frame = 0 Query: 162 SVPRTLSAALWMFFTH----PSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPR----------TALGK---AIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKE 353 +VP S AL FF P ++L +CG A RF S + + CS++ W +QE+F HR LLHS F W G+ IH HH ++HVS+DPP L+ W A ++ +P L + Y GL YEW+H+ VHT+V+P L K +++ +H +HH +D+ WFAFS P +D + T P E Sbjct: 100 AVPSKWSQALRRFFLEEIGPPLVVLSICGFA---YARFKLSSVFTVADTLIFTCSIMF-----WWIQEYFFHRVLLHSPFAWIGKSIHQNHHDKTYFHVSVDPPALILGWLFAAHLILKSILPWGLCLSATIGYAGAGLAYEWSHYIVHTKVKPTRIESSTNPVVATLSKYYSSMRDNHIRHHRIDDGNWFAFSVPAMDDAFYTNPRVE 300
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|552817952|ref|XP_005845073.1| (hypothetical protein CHLNCDRAFT_137370 [Chlorella variabilis] >gi|307104719|gb|EFN52971.1| hypothetical protein CHLNCDRAFT_137370 [Chlorella variabilis]) HSP 1 Score: 97.0561 bits (240), Expect = 2.647e-19 Identity = 76/192 (39.58%), Postives = 97/192 (50.52%), Query Frame = 0 Query: 160 DFSVPRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWV-FVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVP 350 + VPRTL AL +FFTHPS LLIL LAGL+A R L + ++ GW +QEW +H LLHS DW VSID P +V + A + L W+ F L T Y+ MGL YE+ H+ VHTR P + L K I+ HH HH +E +W AF+ P +D GT P Sbjct: 103 EQEVPRTLPHALAVFFTHPSSLLILAALAGLLAWRCHLP------LHAAADGAVAACVAAGWAVQEWLIHNLLLHSERDW----------------VSIDDPPIVLAFMAASLALFWLAFGGSELAVTAAAAYYSMGLVYEFTHYIVHTRYLPTSRLAKRIRMHHLLHHTRNEAYWLAFTVPQVDQLFGTDP 272
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|551336705|ref|WP_022956134.1| (fatty acid hydroxylase [Perlucidibaca piscinae]) HSP 1 Score: 92.4337 bits (228), Expect = 3.545e-18 Identity = 70/221 (31.67%), Postives = 103/221 (46.61%), Query Frame = 0 Query: 164 PRTLSAALWMFFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSSFDWFGR--------EIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVP-RPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGSKGFPS 375 P T S AL ++ P + +IL + G+ RF+ S L F L I W + EW LHR +LH+ GR H HHA P+ + P+ V V A +L +P R + + L + + L YEW H+ VHTR++PR+A +A+ +H HH E +WF+F P +D LGT P A+ ++RG +G S Sbjct: 15 PETFSGALAVYLRQPGVCVILVFVLGVAGWRFALGEWSVRDLAGFA------LAIAVWPVMEWLLHRHVLHARPWQLGRWRIDPDPAVKHRAHHAEPWRVRLVFLPVYVPVMLAPMLVLAVPLLPDRAVALSFLTGFGLAALNYEWTHWIVHTRIQPRSAYYQAVFRNHRLHHFRHEDYWFSFMLPALDRWLGTGPDAASVAPSGTARDL-DKRGGRGLSS 228
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|1180706274|ref|WP_084191439.1| (hypothetical protein [Algiphilus aromaticivorans]) HSP 1 Score: 89.3521 bits (220), Expect = 7.514e-17 Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 0 Query: 177 HPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLH-SSFDWFGREI-------HAQHHALPFY-HVSIDPPLLVGVWGAIACILGWVFVPRP-LVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKK 363 +PS LI +A + R S G ++ + ++LL + W EWFLH+ LLH ++ FGR + H HH P+ + + PP + +G + LGW P P L + L Y L YEW HF VHTR++P+ + + H HH +E++W+ F+ +D LGT P ++ + + Sbjct: 48 YPSPRLIAGFIAIAIGLRASLGGWQTA------DALMLLLGVTVWPFLEWFLHKHLLHVKPWEIFGRRVDPDFARRHRAHHREPWRPELIVLPPYVHFTFGPLLLALGWWAAPDPALAMSALVGYGFAALNYEWTHFMVHTRIQPQNRYYQGLFRAHRMHHFRNEKYWYGFTLTSVDRMLGTGPDPDVTPRSEHCRD 238
BLAST of EWM26012.1 vs. NCBI_GenBank
Match: gi|1097603426|emb|SFQ61191.1| (Fatty acid hydroxylase superfamily protein [Bacillus sp. cl95] >gi|1097614780|emb|SFA71111.1| Fatty acid hydroxylase superfamily protein [Bacillus sp. UNCCL13]) HSP 1 Score: 79.7221 bits (195), Expect = 7.541e-14 Identity = 63/209 (30.14%), Postives = 95/209 (45.45%), Query Frame = 0 Query: 174 FFTHPSILLILCGLAGLVAGRFSFSGPSSSLLQIFLECSLVLLTIVGWILQEWFLHRFLLHSS------FDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGW----VFVPRPLVWTV-LGTYWIMGLF-YEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGKEARAKKAKERRGS 370 FF H I++I L L G F+G + + L L+ ++G++L E+F HRFL H F + +H HH P + L + +W +I L + + +WTV G + LF YEW H+ H ++P+T G+ IK H HH +E +WF S P D GT AKE E + + K E++ Sbjct: 8 FFFHFDIMIIFI-LLCLGIGFMFFTGIT------LIAAVLFLVGMLGFVLSEYFTHRFLFHLKAPKNPFFLKLLKRLHYDHHTYP----NDLKLLFLPLWYSIPNFLIFSSIVYLITHNFLWTVSFGMGLMTMLFIYEWKHYVAHRPIKPKTKFGQWIKKVHILHHYKNENYWFGVSNPFTDVIFGTF-AKEKEVETSHTVKDLEKKAK 204 The following BLAST results are available for this feature:
BLAST of EWM26012.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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