EWM26032.1, cds4642 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26032.1 vs. NCBI_GenBank
Match: gi|585107951|gb|EWM26032.1| (hypothetical protein Naga_101534g1 [Nannochloropsis gaditana]) HSP 1 Score: 355.91 bits (912), Expect = 2.982e-124 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MNAPLHDHSALTLAGRAAHSAVIVTGSRNEPPFSPLTGSSSATSQPPPLPRPSPQKKSTPTDKRKIVTSVDSVEPLRKKTIATAGVKRGRHPYGVRPLGNYWTEGMPDDIERRQKGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKLAEG 175
MNAPLHDHSALTLAGRAAHSAVIVTGSRNEPPFSPLTGSSSATSQPPPLPRPSPQKKSTPTDKRKIVTSVDSVEPLRKKTIATAGVKRGRHPYGVRPLGNYWTEGMPDDIERRQKGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKLAEG
Sbjct: 1 MNAPLHDHSALTLAGRAAHSAVIVTGSRNEPPFSPLTGSSSATSQPPPLPRPSPQKKSTPTDKRKIVTSVDSVEPLRKKTIATAGVKRGRHPYGVRPLGNYWTEGMPDDIERRQKGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKLAEG 175
BLAST of EWM26032.1 vs. NCBI_GenBank
Match: gi|553183153|ref|XP_005853849.1| (histone arginine, partial [Nannochloropsis gaditana CCMP526] >gi|422295212|gb|EKU22511.1| histone arginine, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 202.601 bits (514), Expect = 1.233e-64 Identity = 101/107 (94.39%), Postives = 101/107 (94.39%), Query Frame = 0
Query: 69 SVDSVEPLRKKTIATAGVKRGRHPYGVRPLGNYWTEGMPDDIERRQKGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKLAEG 175
SVDSVEPLRKKTIATAGVKRGRHPYGVRPLGNYWTEGMPD KGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKLAEG
Sbjct: 1 SVDSVEPLRKKTIATAGVKRGRHPYGVRPLGNYWTEGMPD------KGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKLAEG 101
BLAST of EWM26032.1 vs. NCBI_GenBank
Match: gi|1214710976|gb|OWZ22020.1| (Histone arginine demethylase [Phytophthora megakarya]) HSP 1 Score: 58.9214 bits (141), Expect = 4.261e-7 Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 87 KRGRHPYGVRPLGNYWTEGMPDDIERRQKGLGLRAFATLADDVLVHSVLFVLDAVTLSRLSRCSRAWYVYSHAYTDVWKALVLGKL 172
+R HP GV+P+GNY+ + + E R GLGL A + D L+ S+L A L+ L+ CSRA YVY + ++W+ LVL ++
Sbjct: 41 RRLEHPLGVKPIGNYFEDAVKGVTECRASGLGL--LARMQDSQLL-SLLNYCSATDLANLASCSRAAYVYG-THDELWRVLVLEEM 122 The following BLAST results are available for this feature:
BLAST of EWM26032.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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