EWM26037.1, cds4636 (CDS) Nannochloropsis gaditana

Overview
NameEWM26037.1
Unique Namecds4636
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1139105..1139149 +
Alignment locationCM002463.1:1139205..1139390 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26037.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101726g2.5805.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1139105..1139149 +
CM002463.1supercontigCM002463.1:1139205..1139390 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26037.1 vs. NCBI_GenBank
Match: gi|585107962|gb|EWM26037.1| (hypothetical protein Naga_101726g2 [Nannochloropsis gaditana])

HSP 1 Score: 152.91 bits (385), Expect = 4.989e-47
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 
Query:    1 MEGLCINVGGKRPFLRSTCSRKLGLRGADGLGREGRWKEWRQPSRSFVLMWPIQAQVRCTRRGAKKSGGPRLVKDD 76
            MEGLCINVGGKRPFLRSTCSRKLGLRGADGLGREGRWKEWRQPSRSFVLMWPIQAQVRCTRRGAKKSGGPRLVKDD
Sbjct:    1 MEGLCINVGGKRPFLRSTCSRKLGLRGADGLGREGRWKEWRQPSRSFVLMWPIQAQVRCTRRGAKKSGGPRLVKDD 76
The following BLAST results are available for this feature:
BLAST of EWM26037.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107962|gb|EWM26037.1|4.989e-47100.00hypothetical protein Naga_101726g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4648rna4648Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications