EWM26045.1, cds4628 (CDS) Nannochloropsis gaditana

Overview
NameEWM26045.1
Unique Namecds4628
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1124084..1124236 +
Alignment locationCM002463.1:1124441..1124704 +

Link to JBrowse

Properties
Property NameValue
Start range1124084
Start range.
Protein idEWM26045.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101791g1.3270.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1124084..1124236 +
CM002463.1supercontigCM002463.1:1124441..1124704 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26045.1 vs. NCBI_GenBank
Match: gi|585107983|gb|EWM26045.1| (hypothetical protein Naga_101791g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 273.863 bits (699), Expect = 5.451e-93
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:    1 SGPPRDGGPRPSPLPSHPLPLTRAGGQGGGCAGGGEDDRACPGARDPARPTLYAFYGYRLRKGWRDGKSRGNSEVGREGGREGGREGRRVPGHGRTLLWYRRPWYDWVIRVPPPDIYTQNVFAENSIKYIAYILFLCD 138
            SGPPRDGGPRPSPLPSHPLPLTRAGGQGGGCAGGGEDDRACPGARDPARPTLYAFYGYRLRKGWRDGKSRGNSEVGREGGREGGREGRRVPGHGRTLLWYRRPWYDWVIRVPPPDIYTQNVFAENSIKYIAYILFLCD
Sbjct:    1 SGPPRDGGPRPSPLPSHPLPLTRAGGQGGGCAGGGEDDRACPGARDPARPTLYAFYGYRLRKGWRDGKSRGNSEVGREGGREGGREGRRVPGHGRTLLWYRRPWYDWVIRVPPPDIYTQNVFAENSIKYIAYILFLCD 138
The following BLAST results are available for this feature:
BLAST of EWM26045.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107983|gb|EWM26045.1|5.451e-93100.00hypothetical protein Naga_101791g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4640rna4640Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications