EWM26065.1, cds4608 (CDS) Nannochloropsis gaditana

Overview
NameEWM26065.1
Unique Namecds4608
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1076869..1077237 -

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Properties
Property NameValue
Protein idEWM26065.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102077g1.10362.mrna
GbkeyCDS
End range.
End range1077237
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1076869..1077237 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26065.1 vs. NCBI_GenBank
Match: gi|585108032|gb|EWM26065.1| (hypothetical protein Naga_102077g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 208.379 bits (529), Expect = 1.550e-67
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 HFPFPSPLPPFLPPSLHSRHINRRGATIGSHLPPSLLPSLLLPSPPLLRFLLPSHSCLPSSPPSSPPPPPLLPPPPPPPPPPPPPPPSPPPRPRPRETARADPVIEDTLRNAIHFSCLWELV 122
            HFPFPSPLPPFLPPSLHSRHINRRGATIGSHLPPSLLPSLLLPSPPLLRFLLPSHSCLPSSPPSSPPPPPLLPPPPPPPPPPPPPPPSPPPRPRPRETARADPVIEDTLRNAIHFSCLWELV
Sbjct:    1 HFPFPSPLPPFLPPSLHSRHINRRGATIGSHLPPSLLPSLLLPSPPLLRFLLPSHSCLPSSPPSSPPPPPLLPPPPPPPPPPPPPPPSPPPRPRPRETARADPVIEDTLRNAIHFSCLWELV 122
The following BLAST results are available for this feature:
BLAST of EWM26065.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108032|gb|EWM26065.1|1.550e-67100.00hypothetical protein Naga_102077g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4620rna4620Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications