EWM26149.1, cds4593 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|585108142|gb|EWM26148.1| (activating signal cointegrator 1 [Nannochloropsis gaditana] >gi|585108143|gb|EWM26149.1| activating signal cointegrator 1 [Nannochloropsis gaditana]) HSP 1 Score: 1064.29 bits (2751), Expect = 0.000e+0 Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0
Query: 1 MAGVGKIEAWVRENVARLLCMDVNDSEELAACVLAMPCATDKEEREIKQLIKEFLGSSAEVETFSTEVVQRRRRPGEGVPVTERADEAKGGTQAGSDIDRGGKSGKRQNAKEERGEMMKPPGKAVRDTTAQEEAEDDFWGTLSSTSLHRSDAASACGGRQDNSTSGKRQGRMEDKAKSQSRESERVRKGKNQGGGGRAVPAASGGGRDVVCRQPLTASPTDDFAYQPSIMARPAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGIDTGKEESDAGRIGTNEAAEEVARLAWELSTSGTLEGNYDREGARKGKSGVSRLSGRAREVFEGLHAHFGRIKSSNYAKEREKRQGHPEGEDAEPKAETFSSRSRVQTTSDRLHDDEEMEIEDL 523
MAGVGKIEAWVRENVARLLCMDVNDSEELAACVLAMPCATDKEEREIKQLIKEFLGSSAEVETFSTEVVQRRRRPGEGVPVTERADEAKGGTQAGSDIDRGGKSGKRQNAKEERGEMMKPPGKAVRDTTAQEEAEDDFWGTLSSTSLHRSDAASACGGRQDNSTSGKRQGRMEDKAKSQSRESERVRKGKNQGGGGRAVPAASGGGRDVVCRQPLTASPTDDFAYQPSIMARPAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGIDTGKEESDAGRIGTNEAAEEVARLAWELSTSGTLEGNYDREGARKGKSGVSRLSGRAREVFEGLHAHFGRIKSSNYAKEREKRQGHPEGEDAEPKAETFSSRSRVQTTSDRLHDDEEMEIEDL
Sbjct: 1 MAGVGKIEAWVRENVARLLCMDVNDSEELAACVLAMPCATDKEEREIKQLIKEFLGSSAEVETFSTEVVQRRRRPGEGVPVTERADEAKGGTQAGSDIDRGGKSGKRQNAKEERGEMMKPPGKAVRDTTAQEEAEDDFWGTLSSTSLHRSDAASACGGRQDNSTSGKRQGRMEDKAKSQSRESERVRKGKNQGGGGRAVPAASGGGRDVVCRQPLTASPTDDFAYQPSIMARPAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGIDTGKEESDAGRIGTNEAAEEVARLAWELSTSGTLEGNYDREGARKGKSGVSRLSGRAREVFEGLHAHFGRIKSSNYAKEREKRQGHPEGEDAEPKAETFSSRSRVQTTSDRLHDDEEMEIEDL 523
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|156399329|ref|XP_001638454.1| (predicted protein [Nematostella vectensis] >gi|156225575|gb|EDO46391.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 102.449 bits (254), Expect = 1.456e-19 Identity = 68/208 (32.69%), Postives = 103/208 (49.52%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDVK-------------DGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGIDTGKEESD-----AGRIGTNEAAEEVA 422
P PC C+G H + NC CG+++C +EG C FC + + R+ I+ R KL + S+E E+VK G ++A +++LL +D + RTKV DD+ DYF T GN W+ +KE E+ +EEE R K G R M++++D AGRRV ++S D ++ D +G T E V+
Sbjct: 120 PGRHPCECLGQKHGLVNNCTSCGRIVCDQEGAGPCYFCGALVCS-----RAEQEIIARESKKSAKLLKQLMSQEFSEEVKSQGRMGTSNGKDLQGLDKAIAHKNKLLEYDKTSVCRTKVIDDECDYF-STDGN-KWLSKKEKEQLTVKEEELRAKRHGSRRDMKITLDFAGRRVVEENSTFDMYGQDPDLPVLASGYYSTQSNKENVS 320
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|703112|gb|AAC41738.1| (thyroid receptor interactor, partial [Homo sapiens]) HSP 1 Score: 97.8265 bits (242), Expect = 3.904e-19 Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKT---------DLTNPANGYRSRPPILLRSLAARGKLAVENE----SKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGI 400
P PC C+G H + NCL CG+++C +EG C FC T L +N + L+ + GK+ + + +E+R +K G E+A + +D+LL FD + RT+V DD++DYF S W+ + E E ++REEE RE R +++ID AGR++ +++ +
Sbjct: 42 PGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQKLLKKLMSGVENSGKVDISTKDLLPHQELR--IKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQ--WLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSL 218
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|6013191|gb|AAF01278.1| (activating signal cointegrator 1 [Homo sapiens]) HSP 1 Score: 99.3673 bits (246), Expect = 2.029e-18 Identity = 59/184 (32.07%), Postives = 97/184 (52.72%), Query Frame = 0
Query: 230 MARPAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKT---------DLTNPANGYRSRPPILLRSLAARGKLAVENE----SKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGI 400
+A P PC C+G H + NCL CG+++C +EG C FC T L +N + L+ + GK+ + + +E+R +K G E+A + +D+LL FD + RT+V DD++DYF S W+ + E E ++REEE RE R +++ID AGR++ +++ +
Sbjct: 163 VALPGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQKLLKKLMSGVENSGKVDISTKDLLPHQELR--IKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQ--WLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSL 342
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|1160089726|ref|XP_020381620.1| (activating signal cointegrator 1 isoform X2 [Rhincodon typus]) HSP 1 Score: 99.3673 bits (246), Expect = 2.376e-18 Identity = 60/186 (32.26%), Postives = 88/186 (47.31%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFC-------------------KTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSG 399
P PC C+G H + NCL CG+++C +EG C FC L G P + R L ++A +K G E+A + +D+LL +D + A RT+V DD++DYF S W+ ++E E +REEE RE R +++ID AGRR+ L+D G
Sbjct: 177 PGRHPCECLGQTHQLINNCLSCGRIVCMQEGSGPCLFCGALVCTKEEQEILVRDSNKSQKLRKKLMGTTGNPDVFERDLLPHQEMA-----------LKAGLEKAIKHKDKLLEYDKTSARRTQVIDDESDYFAADSNQ--WLSKQEREALRKREEELRELRHASRRTKQITIDFAGRRI-LEDQG 348
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|817345942|ref|XP_012298440.1| (activating signal cointegrator 1 isoform X3 [Aotus nancymaae]) HSP 1 Score: 98.5969 bits (244), Expect = 2.876e-18 Identity = 59/181 (32.60%), Postives = 95/181 (52.49%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKT---------DLTNPANGYRSRPPILLRSLAARGKLAVENE----SKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGI 400
P PC C+G H + NCL CG+++C +EG C FC T L +N + L+ + GK+ V + +E+R +K G E+A + +D+LL FD + RT+V DD++DYF S W+ + E E ++REEE RE R +++ID AGR++ +++ +
Sbjct: 166 PGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQRLLKKLMSGVENSGKMDVSTKDLLPHQELR--IKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQ--WLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSL 342
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|1176062328|ref|XP_020632042.1| (activating signal cointegrator 1-like [Orbicella faveolata]) HSP 1 Score: 98.2117 bits (243), Expect = 4.055e-18 Identity = 60/187 (32.09%), Postives = 96/187 (51.34%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDV---------KDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGIDTGKEESDAG 410
P PC C+G H+ + NC+ CG+++C +EG C FC + + IL R+ KL + ++ + D +G ++A ++RL+ +D S RTKV DD+ DYF S W+ +KE + +++E+E REK G R M++++D AGR+V ID G+ E D G
Sbjct: 127 PGRHPCECLGQKHSLVNNCIECGRIVCMQEGSGPCFFCGALVCT-----KEEQEILARNSKKSQKLYQKLLTQTIESDTGAKAETSTADEGLQKAIAHKNRLIEYDKSGVRRTKVIDDECDYF--ASDTNRWLSKKERDALKKKEDELREKRHGSRREMKVTLDFAGRKV------IDEGETEVDYG 300
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|1005459700|ref|XP_015766920.1| (PREDICTED: activating signal cointegrator 1-like [Acropora digitifera]) HSP 1 Score: 97.8265 bits (242), Expect = 4.879e-18 Identity = 59/183 (32.24%), Postives = 91/183 (49.73%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSF-----CKTDLTNPANGYRSRPPILLRSLAARGKLAVENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGIDTGKEESDAG 410
P PC C+G H + NC+ CG+++C +EG C F C T+ + L L R ++E+ S+E G + A +++L+ FD S RTKV DD+ DYF S W+ ++E + ++EE+ REK G R M++++D AGRRV + +D E AG
Sbjct: 129 PGRHPCECLGQKHQLINNCIECGRIVCMQEGSGPCYFCGALVCSTEEKEILAQKSKKSQKLYEKLLTR---SIEDASEETLSVADKGLQEAIAHKNKLIEFDKSGVRRTKVIDDECDYFASDSNR--WLSKRERDTLRKKEEDLREKRHGSRRQMKVTLDFAGRRVIDEKEVLDYDTESDVAG 306
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|1214032968|ref|XP_021569417.1| (activating signal cointegrator 1 isoform X2 [Carlito syrichta]) HSP 1 Score: 97.4413 bits (241), Expect = 6.919e-18 Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKT---------DLTNPANGYRSRPPILLRSLAARGKLAVENE----SKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVF 394
P PC C+G H + NCL CG+++C +EG C FC T L +N + L+ + GK+ + + +E+R +K G E+A + +D+LL FD + RT+V DD++DYF S W+ + E E ++REEE RE R +++ID AGR +
Sbjct: 88 PGRHPCDCLGQKHKLINNCLNCGRIVCEQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQKLLKKLMSGMENSGKMEISTKDLLPHQELR--IKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQ--WLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRTIL 258
BLAST of EWM26149.1 vs. NCBI_GenBank
Match: gi|830016198|ref|XP_012614036.1| (activating signal cointegrator 1 isoform X1 [Microcebus murinus]) HSP 1 Score: 97.4413 bits (241), Expect = 9.313e-18 Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = 0
Query: 233 PAPFPCRCMGTCHTPLGNCLRCGKVICSKEGWTICSFCKT---------DLTNPANGYRSRPPILLRSLAARGKLAVENE----SKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTSGNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVF 394
P PC C+G H + NCL CG+++C +EG C FC T L +N + L+ + GK + + +E+R +K G E+A + +D+LL FD + RT+V DD++DYF S W+ + E E ++REEE RE R +++ID AGR++
Sbjct: 166 PGRHPCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQKLLKKLMSGMENSGKADISTKDLLPHQELR--IKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQ--WLSKLERETLQKREEELRELRHASRLSKKITIDFAGRKIL 336 The following BLAST results are available for this feature:
BLAST of EWM26149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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