EWM26098.1, cds4575 (CDS) Nannochloropsis gaditana

Overview
NameEWM26098.1
Unique Namecds4575
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:974050..974520 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26098.1
ProductProtein of unknown function DUF866, eukaryotic
Orig transcript idgnl|cribi|Naga_100014g65.9275.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:974050..974520 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008584DUF866_euk
Homology
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|553196491|ref|XP_005856358.1| (hypothetical protein NGA_2119900 [Nannochloropsis gaditana CCMP526] >gi|422292712|gb|EKU20014.1| hypothetical protein NGA_2119900 [Nannochloropsis gaditana CCMP526] >gi|585108092|gb|EWM26098.1| Protein of unknown function DUF866, eukaryotic [Nannochloropsis gaditana])

HSP 1 Score: 322.783 bits (826), Expect = 8.247e-112
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIETTGRYCVDLSKDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILETAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKGPKR 156
            MPVFALQLKAELEGVSRIETTGRYCVDLSKDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILETAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKGPKR
Sbjct:    1 MPVFALQLKAELEGVSRIETTGRYCVDLSKDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILETAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKGPKR 156          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|695450186|ref|XP_009535417.1| (hypothetical protein PHYSODRAFT_339218 [Phytophthora sojae] >gi|348668961|gb|EGZ08784.1| hypothetical protein PHYSODRAFT_339218 [Phytophthora sojae])

HSP 1 Score: 88.9669 bits (219), Expect = 1.884e-19
Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIETT--GRYCVDLS--KDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGG-TRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGK 152
            M +F L +KA+LE V  +E     R+C+D+   +  E +  VF+   E+V +A  RG  H  +K PG  KP+ LT++      T   + +DSG F      E RG++  AW     + VVS GG   FE  +L D D+ +YDEE  Q+V V  V     V K
Sbjct:    1 MVLFVLYVKADLENVETLEAPPLHRWCLDVKEPRGDEKREAVFVSDEEAVDVAGGRGEVHFTLKWPGANKPSQLTVVRDIKKLTRAVSAADSGEFVPFVGFECRGIEPYAWHPESGYKVVSAGGQATFEDVDLSD-DWADYDEEGEQSVGVYGVEYKFEVHK 161          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|669148396|ref|XP_008609760.1| (hypothetical protein SDRG_05800 [Saprolegnia diclina VS20] >gi|530738737|gb|EQC36979.1| hypothetical protein SDRG_05800 [Saprolegnia diclina VS20])

HSP 1 Score: 87.4261 bits (215), Expect = 5.672e-19
Identity = 52/154 (33.77%), Postives = 85/154 (55.19%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIETTG--RYCVDLSKD--GECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDF-VVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEV 144
            M +F L +KA+LE V  IE     R+C+D+ +    E + G+++   E + ++ SRGT H  +K PG  K + LT++      T   + +DSG +  +   E RG++  +W   D + +  ++ GT FE  NL + D+ EYDEE +Q+V V  V
Sbjct:    1 MVLFVLYVKADLENVGSIEAPALHRWCLDIKEPTGDETREGIWVSDEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAISANDSGEYVPLVGFECRGIEPVSWSPEDGYKITCADSGTVFENVNLSE-DWAEYDEEGDQSVGVYAV 153          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|302847391|ref|XP_002955230.1| (hypothetical protein VOLCADRAFT_109954 [Volvox carteri f. nagariensis] >gi|300259522|gb|EFJ43749.1| hypothetical protein VOLCADRAFT_109954 [Volvox carteri f. nagariensis])

HSP 1 Score: 86.6557 bits (213), Expect = 1.296e-18
Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSR--IETTGRYCVDL--SKDGECKRGVFIDMSESVAMADSRGTCHMQIKL-PGMTKPANLTILE----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKG 153
            MPVF L ++AELE V    I ++  +C+D+  S   E K+GV++  +E   ++ S+GT ++ +K   G  K A++ + E    T PYT  D G F  +   E RG+D  A+    D+ VVS GGT+++  +L + ++++Y E+   +V +    +   + +G
Sbjct:    1 MPVFLLSIRAELENVESLSIPSSSHFCLDVKESAGSEEKKGVYVTSTEQHELSGSKGTANLVMKFAKGSKKEASINVQEIKGVTRPYTADDDGKFVPIIAFECRGLDPIAFHPEGDWRVVSAGGTKYDNVDLKEAEWSDYCEKAAASVGIYNFESKFELYRG 162          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|813178140|ref|XP_012205539.1| (hypothetical protein SPRG_10499 [Saprolegnia parasitica CBS 223.65] >gi|641529555|gb|KDO23721.1| hypothetical protein SPRG_10499 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-18
Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIETTG--RYCVDLSKD--GECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDF-VVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEV 144
            M +F L +KA+LE V  IE     R+C+D+ +    E + G+++   E + ++ SRGT H  +K PG  K + LT++      T   + +DSG F  +   E RG++  +W     + +  ++ GT FE  NL + D+ EYDEE +Q+V V  V
Sbjct:    1 MVLFVLYVKADLENVQSIEAPALHRWCLDIKEPTGDETREGIWVSDEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAISANDSGEFVPLVGFECRGIEPVSWSPEGGYKITCADSGTVFEDVNLSE-DWAEYDEEGDQSVGVYAV 153          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|1173941682|gb|OQR90802.1| (hypothetical protein ACHHYP_05237 [Achlya hypogyna])

HSP 1 Score: 85.8853 bits (211), Expect = 2.868e-18
Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIETT--GRYCVDLSK--DGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGG-TRFEAANLVDGDYTEYDEEHNQAVSV 141
            M +F L +KA+LE +  IE     R+C+D+ +    E + GV++   E + +  SRGT H  +K PG  K + LT++      T   T +DSG +  +   E RG++   W     + VVS GG T FE  NL + D+ +YDEE +Q+V +
Sbjct:    1 MVLFVLYVKADLENIESIEAPPLHRWCLDIKEPTSDERREGVWVSDEEELEVTGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAITANDSGEYVPIVGFECRGLEPYNWSAEGGYKVVSAGGSTVFEDVNLSE-DWADYDEEGDQSVGI 150          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|673041167|ref|XP_008874544.1| (hypothetical protein H310_10075 [Aphanomyces invadans] >gi|574469754|gb|ETV96767.1| hypothetical protein H310_10075 [Aphanomyces invadans])

HSP 1 Score: 84.3445 bits (207), Expect = 1.196e-17
Identity = 56/165 (33.94%), Postives = 84/165 (50.91%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIE--TTGRYCVDLSK--DGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTR-FEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKGPK 155
            M +F L +KA+L+ +   E     R+C+D+ +    E + GV++   E V +   RG  H  +K PG  K + LTI+      T P T +DSG F  V   + RG++  AW     + + S GGT  F   NL + D++EYDE+  QAV +  +    VV K  K
Sbjct:    1 MVLFVLYVKADLDAIDLWEFPVNHRWCLDIKEPTSEEKREGVWVCDDELVDVPGGRGEAHFLMKWPGAKKESQLTIIRDVKKLTRPITGADSGEFVPVVGFDCRGLEPVAWYPEGGYTLTSAGGTAVFRDVNLAE-DWSEYDEDGEQAVGIYSIEHKFVVVKDKK 164          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|675170497|ref|XP_008894133.1| (hypothetical protein PPTG_03207 [Phytophthora parasitica INRA-310] >gi|566018700|gb|ETI41611.1| hypothetical protein F443_13166 [Phytophthora parasitica P1569] >gi|566018718|gb|ETI41629.1| hypothetical protein F443_13161 [Phytophthora parasitica P1569] >gi|567956033|gb|ETK81662.1| hypothetical protein L915_12857 [Phytophthora parasitica] >gi|567984711|gb|ETL35072.1| hypothetical protein L916_12765 [Phytophthora parasitica] >gi|568014136|gb|ETL88313.1| hypothetical protein L917_12607 [Phytophthora parasitica] >gi|568044353|gb|ETM41571.1| hypothetical protein L914_12674 [Phytophthora parasitica] >gi|568105503|gb|ETN20139.1| hypothetical protein PPTG_03207 [Phytophthora parasitica INRA-310] >gi|570322313|gb|ETO70261.1| hypothetical protein F444_13238 [Phytophthora parasitica P1976] >gi|570946106|gb|ETP11363.1| hypothetical protein F441_13119 [Phytophthora parasitica CJ01A1] >gi|570978207|gb|ETP39502.1| hypothetical protein F442_13038 [Phytophthora parasitica P10297] >gi|970631482|gb|KUF78081.1| hypothetical protein AM587_10010288 [Phytophthora nicotianae] >gi|970654671|gb|KUF92950.1| Inhibitor of growth protein 4 [Phytophthora nicotianae])

HSP 1 Score: 83.5741 bits (205), Expect = 1.766e-17
Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRIETT--GRYCVDLS--KDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEG-GTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGK 152
            M +F L +KAELE V  +      R+C+D+   +  E +  VF+   E+V +A  RG  H  +K PG  KP+ LT++      T   T +DSG F      E RG++  AW     + VVS G    FE  +L + D+ +YDEE  Q+V V  V     V K
Sbjct:    1 MVLFVLYVKAELENVETLAAPPLHRWCLDVKEPRGDEKREAVFVSDEEAVDVAGGRGEVHFTLKWPGANKPSQLTVVRDVKKLTREVTGADSGEFVPFVGFECRGLEPYAWHPESGYRVVSAGRHAAFEDVDLSE-DWADYDEEGEQSVGVYNVEWKFEVHK 161          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|1206244913|ref|XP_021338392.1| (UPF0587 protein C1orf123 homolog [Babesia microti strain RI] >gi|1139688517|emb|SJK86204.1| UPF0587 protein C1orf123 homolog [Babesia microti strain RI])

HSP 1 Score: 81.2629 bits (199), Expect = 1.258e-16
Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 0
Query:    3 VFALQLKAELEGVSRIETTG--RYCVDLSKDG--ECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILETA-PYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEV 144
            +  L +KAELE V  +      R+ VD+ +    E ++ V+   SES ++ +SRG  +  +K       A++ I E   PYTT D G F+ +A+ EARG+D+  W  R  F  +   G R  A    +G + +YD + N+ +SVLE+
Sbjct:    2 ILGLYIKAELENVDSVRAVPGIRWEVDVKEPTGYEFRKNVYFSSSESYSIPNSRGDANFIVKWRDSDARASIRIAEEGIPYTTEDVGKFKCIAKFEARGLDIIKWHPRGGFQALR--GGRVYAVTFQEGSWADYDSDTNEPLSVLEL 146          
BLAST of EWM26098.1 vs. NCBI_GenBank
Match: gi|301104709|ref|XP_002901439.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100914|gb|EEY58966.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 81.2629 bits (199), Expect = 1.520e-16
Identity = 56/163 (34.36%), Postives = 81/163 (49.69%), Query Frame = 0
Query:    1 MPVFALQLKAELEGVSRI--ETTGRYCVDLS--KDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILE-----TAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVD--GDYTEYDEEHNQAVSVLEVATNVVVGK 152
            M +F L +KAELE V  +      R+C+D+   +  E +  VF+   E+V +A  RG  H  +K PG  KP+ LT++      T   T +DSG F      E RG++  AW     + V+S G  R  A + VD   D+ +YDEE  Q+V +  V     V K
Sbjct:    1 MVLFVLYVKAELENVETLVAPPLHRWCLDVKEPRGDEKREAVFVSDEEAVDVAGGRGEAHFTLKWPGANKPSQLTVVRDVKKLTREVTGADSGEFVPFVGFECRGLEPYAWHPESGYRVLSAG--RHAAFDDVDLSEDWADYDEEGEQSVGIYNVEWKFEVHK 161          
The following BLAST results are available for this feature:
BLAST of EWM26098.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196491|ref|XP_005856358.1|8.247e-112100.00hypothetical protein NGA_2119900 [Nannochloropsis ... [more]
gi|695450186|ref|XP_009535417.1|1.884e-1935.80hypothetical protein PHYSODRAFT_339218 [Phytophtho... [more]
gi|669148396|ref|XP_008609760.1|5.672e-1933.77hypothetical protein SDRG_05800 [Saprolegnia dicli... [more]
gi|302847391|ref|XP_002955230.1|1.296e-1831.48hypothetical protein VOLCADRAFT_109954 [Volvox car... [more]
gi|813178140|ref|XP_012205539.1|2.807e-1833.77hypothetical protein SPRG_10499 [Saprolegnia paras... [more]
gi|1173941682|gb|OQR90802.1|2.868e-1835.10hypothetical protein ACHHYP_05237 [Achlya hypogyna... [more]
gi|673041167|ref|XP_008874544.1|1.196e-1733.94hypothetical protein H310_10075 [Aphanomyces invad... [more]
gi|675170497|ref|XP_008894133.1|1.766e-1735.19hypothetical protein PPTG_03207 [Phytophthora para... [more]
gi|1206244913|ref|XP_021338392.1|1.258e-1633.33UPF0587 protein C1orf123 homolog [Babesia microti ... [more]
gi|301104709|ref|XP_002901439.1|1.520e-1634.36conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4587rna4587Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications