EWM26125.1, cds4570 (CDS) Nannochloropsis gaditana

Overview
NameEWM26125.1
Unique Namecds4570
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:966571..967578 +

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Properties
Property NameValue
Protein idEWM26125.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100014g61.9302.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:966571..967578 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26125.1 vs. NCBI_GenBank
Match: gi|585108119|gb|EWM26125.1| (hypothetical protein Naga_100014g61 [Nannochloropsis gaditana])

HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0 
Query:    1 MPHSKFNWRSTSSPPSQNPDGLFAFAFGDTWKLTDYTLVKPENAKGCTLDVSLEHDSKVTQLQVVCNASALQVSVMQAMNAQDFKWITQMRGTPLPNQPDLYYFRTPEELLTQKLWRLRVKFLFSSTDISAVRIQTLSLSFEKLTRRGSTIKGMVTSSSIRSSAGVARTGMTAVAASAGGIATSRSSHTTHSILYRGSSMSTTTSTTASLTNTPTGSHTPTSDSVCGDGDLVSDLSEEASTGSLGSGPKSNTSSASGSESREGRRTSKISDRGAIRALMSAIDKVISQGGNDGALVDELLLLKERLDNHLVQRSSEQHLNATIARISSIIQSIVM 335
            MPHSKFNWRSTSSPPSQNPDGLFAFAFGDTWKLTDYTLVKPENAKGCTLDVSLEHDSKVTQLQVVCNASALQVSVMQAMNAQDFKWITQMRGTPLPNQPDLYYFRTPEELLTQKLWRLRVKFLFSSTDISAVRIQTLSLSFEKLTRRGSTIKGMVTSSSIRSSAGVARTGMTAVAASAGGIATSRSSHTTHSILYRGSSMSTTTSTTASLTNTPTGSHTPTSDSVCGDGDLVSDLSEEASTGSLGSGPKSNTSSASGSESREGRRTSKISDRGAIRALMSAIDKVISQGGNDGALVDELLLLKERLDNHLVQRSSEQHLNATIARISSIIQSIVM
Sbjct:    1 MPHSKFNWRSTSSPPSQNPDGLFAFAFGDTWKLTDYTLVKPENAKGCTLDVSLEHDSKVTQLQVVCNASALQVSVMQAMNAQDFKWITQMRGTPLPNQPDLYYFRTPEELLTQKLWRLRVKFLFSSTDISAVRIQTLSLSFEKLTRRGSTIKGMVTSSSIRSSAGVARTGMTAVAASAGGIATSRSSHTTHSILYRGSSMSTTTSTTASLTNTPTGSHTPTSDSVCGDGDLVSDLSEEASTGSLGSGPKSNTSSASGSESREGRRTSKISDRGAIRALMSAIDKVISQGGNDGALVDELLLLKERLDNHLVQRSSEQHLNATIARISSIIQSIVM 335
[Close]
BLAST of EWM26125.1 vs. NCBI_GenBank
Match: gi|585109848|gb|EWM27581.1| (hypothetical protein Naga_100015g23 [Nannochloropsis gaditana])

HSP 1 Score: 80.4925 bits (197), Expect = 1.705e-13
Identity = 46/154 (29.87%), Postives = 86/154 (55.84%), Query Frame = 0 
Query:    1 MPHSKFNWRSTSSPPSQNPDGLFAFAFGDTWKLTDYTLVKPE-NAKGCTLDVSLEHDSKVTQLQVVCNASALQVSVMQAMN--AQDFKWITQMRGTPLPNQPDLYYFRTPEELLTQ-KLWRLRVKFLFSSTDISAVRIQTLSLSFE-KLTRRGS 149
            MP+ K NW  +S PP +       FAFG+ + + + TL + +  A+ C L V+LEH ++V +L ++C A  + V++M+  +     + ++T ++G      P L+ FR    LL+  ++W+L++KFLF      ++ I+ +S+  E +  +RG 
Sbjct:    1 MPYLKSNW--SSMPPLEE---FGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVEDQAKKRGE 149
The following BLAST results are available for this feature:
BLAST of EWM26125.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585108119|gb|EWM26125.1|0.000e+0100.00hypothetical protein Naga_100014g61 [Nannochlorops... [more]
gi|585109848|gb|EWM27581.1|1.705e-1329.87hypothetical protein Naga_100015g23 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4582rna4582Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications