EWM26116.1, cds4559 (CDS) Nannochloropsis gaditana

Overview
NameEWM26116.1
Unique Namecds4559
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:941427..941512 +
Alignment locationCM002463.1:941601..942084 +
Alignment locationCM002463.1:942163..942335 +
Alignment locationCM002463.1:942406..942532 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26116.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100014g49.9293.mrna
Geneatp10
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:941427..941512 +
CM002463.1supercontigCM002463.1:941601..942084 +
CM002463.1supercontigCM002463.1:942163..942335 +
CM002463.1supercontigCM002463.1:942406..942532 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR007849ATP10
Homology
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|585108110|gb|EWM26116.1| (uncharacterized protein Naga_100014g49 [Nannochloropsis gaditana])

HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MHTLKIMRGRVQPPLSLMQTFELSKIARSDITRGIGSTSTARLGKPSSQGAYKGSIDPKPDLPPDISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQASTGKTKRLQGKISTRA 289
            MHTLKIMRGRVQPPLSLMQTFELSKIARSDITRGIGSTSTARLGKPSSQGAYKGSIDPKPDLPPDISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQASTGKTKRLQGKISTRA
Sbjct:    1 MHTLKIMRGRVQPPLSLMQTFELSKIARSDITRGIGSTSTARLGKPSSQGAYKGSIDPKPDLPPDISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQASTGKTKRLQGKISTRA 289          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|302772823|ref|XP_002969829.1| (hypothetical protein SELMODRAFT_410829 [Selaginella moellendorffii] >gi|300162340|gb|EFJ28953.1| hypothetical protein SELMODRAFT_410829 [Selaginella moellendorffii])

HSP 1 Score: 120.168 bits (300), Expect = 7.709e-29
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 0
Query:   68 DKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL-----LKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
            D++AA LK+  KI E+I +GYF++     +   K+      L PP  A  FP     ++   T +        N+ V+LV +SFR+S   ++  W+ P  E F  T  + V+++S+ +   L       L  + +N  KA  + +R  +    FG + D R+ + + NR+ GY+FLVD+ GR+RWR +G+ S EE   ++ C   L +E 
Sbjct:   52 DRKAANLKERAKIMEDIDQGYFFDFKDFKKHSGKVVATSTALDPPASATIFPK---STVYTPTRESSIFPLNRNSCVTLVCLSFRNSAEAMVDSWVSPLREAFPSTSDIQVIELSWVESGVLSFVPVRHLFLMCINSSKACTKADR--KLLYAFGDSYDFRKELRVTNRLTGYMFLVDRAGRIRWRSSGQASPEEASHLVSCTASLLQES 256          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|302806868|ref|XP_002985165.1| (hypothetical protein SELMODRAFT_424297 [Selaginella moellendorffii] >gi|300146993|gb|EFJ13659.1| hypothetical protein SELMODRAFT_424297 [Selaginella moellendorffii])

HSP 1 Score: 119.398 bits (298), Expect = 1.150e-28
Identity = 64/210 (30.48%), Postives = 108/210 (51.43%), Query Frame = 0
Query:   68 DKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL-----LKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
            D++AA LK+  KI E+I +GYF++     +   K+      L PP  A  FP     ++   T +        N+ V+LV +SFR+S   ++  W+ P  E F  T  + V+++S+ +   L       L  + +N  K+  + +R  +    FG + D R+ + + NR+ GY+FLVD+ GR+RWR +G+ S EE   ++ C   L +E 
Sbjct:   52 DRKAANLKERAKIMEDIDQGYFFDFKDFKKHSGKVVATSTALDPPASATIFPK---STVYTPTRESSIFPLNKNSCVTLVCLSFRNSAEAMVDSWVSPLREAFPSTSDIQVIELSWVESGVLSFVPVRHLFLMCINSSKSCTKADR--KLLYAFGDSYDFRKDLRVTNRLTGYMFLVDRAGRIRWRSSGQASPEEASHLVSCTASLLQES 256          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|836712777|gb|AKM76484.1| (AT1G08220-like protein [Geranium incanum])

HSP 1 Score: 116.701 bits (291), Expect = 1.905e-27
Identity = 73/231 (31.60%), Postives = 123/231 (53.25%), Query Frame = 0
Query:   66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLR--------------QTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRS---WLKLLKFLL-------VNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
            +++KEA   K+  ++ +E+ RGYF ++ ++ +   K+ +A+K +VP   A KFPS +      V++  G +L+                N + SL+ +SFR+S   ++  W  PFLE F+ +  + + +VSF D +   W  + K LL        +G+  +++R    Q    FG   D R+ + I N + GY+FL+DK GR+RW G+G  S EE+ S+L C   L EE+
Sbjct:   53 MANKEAIE-KERARLADEMNRGYFADIDELKKHGGKIAQANKIIVPAMVATKFPSLE------VSYSDGRVLKLPIVSNGKAPNAEGMPNRKASLLCLSFRESSRAMVNSWSVPFLETFSASKDVDLYEVSFIDSTLLCWKPIKKLLLRKLRSSNPDGKNDALQR----QIVYSFGDHYDFRKELRILNLLTGYIFLLDKFGRIRWHGSGLASKEELASLLSCTSLLVEEK 272          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|1063490694|ref|XP_007016014.2| (PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X1 [Theobroma cacao])

HSP 1 Score: 116.701 bits (291), Expect = 2.082e-27
Identity = 76/228 (33.33%), Postives = 123/228 (53.95%), Query Frame = 0
Query:   66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQA 273
            + +KEA   K+  ++ +E+ RGYF ++ ++ +   K+  A+K ++P   A+KFP       L VT+  G  L+    +N            +VSLV +SFR S  +++  W  PF E F+ +  + + +VSF D SWL     +K LL+   + SI+ E++    Q    FG     R+ + I N + GY+FL+DKLGR+RW+G G  + EE+ S+L C   L EE+ 
Sbjct:   50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPAMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKNALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEKC 269          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|1063490696|ref|XP_007016013.2| (PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X2 [Theobroma cacao])

HSP 1 Score: 116.316 bits (290), Expect = 2.243e-27
Identity = 76/227 (33.48%), Postives = 123/227 (54.19%), Query Frame = 0
Query:   66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
            + +KEA   K+  ++ +E+ RGYF ++ ++ +   K+  A+K ++P   A+KFP       L VT+  G  L+    +N            +VSLV +SFR S  +++  W  PF E F+ +  + + +VSF D SWL     +K LL+   + SI+ E++    Q    FG     R+ + I N + GY+FL+DKLGR+RW+G G  + EE+ S+L C   L EE+
Sbjct:   50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPAMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKNALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEK 268          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|508786377|gb|EOY33633.1| (Mitochondria isoform 2 [Theobroma cacao])

HSP 1 Score: 115.546 bits (288), Expect = 5.739e-27
Identity = 76/228 (33.33%), Postives = 122/228 (53.51%), Query Frame = 0
Query:   66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQA 273
            + +KEA   K+  ++ +E+ RGYF ++ ++ +   K+  A+K ++P   A+KFP       L VT+  G  L+    +N            +VSLV +SFR S  +++  W  PF E F+ +  + + +VSF D SWL     +K LL+   + SI+ E+     Q    FG     R+ + I N + GY+FL+DKLGR+RW+G G  + EE+ S+L C   L EE+ 
Sbjct:   50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPTMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKDALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEKC 269          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|508786376|gb|EOY33632.1| (Mitochondria isoform 1 [Theobroma cacao] >gi|508786378|gb|EOY33634.1| Mitochondria isoform 1 [Theobroma cacao])

HSP 1 Score: 115.161 bits (287), Expect = 5.941e-27
Identity = 76/227 (33.48%), Postives = 122/227 (53.74%), Query Frame = 0
Query:   66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
            + +KEA   K+  ++ +E+ RGYF ++ ++ +   K+  A+K ++P   A+KFP       L VT+  G  L+    +N            +VSLV +SFR S  +++  W  PF E F+ +  + + +VSF D SWL     +K LL+   + SI+ E+     Q    FG     R+ + I N + GY+FL+DKLGR+RW+G G  + EE+ S+L C   L EE+
Sbjct:   50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPTMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKDALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEK 268          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|836712773|gb|AKM76482.1| (AT1G08220-like protein [Erodium trifolium])

HSP 1 Score: 115.546 bits (288), Expect = 5.965e-27
Identity = 71/222 (31.98%), Postives = 116/222 (52.25%), Query Frame = 0
Query:   69 KEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLR--------QTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRS---WLKLLKFLL-------VNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
             E   LK+  +I +EI+RGYF ++ +I +   K+  A+K +VP  +A KFPS + +   G T +F  +            N + S++ ++FR+   +++  W  P L+ F+ +  + + QVSF D +   W  + K LL        +G   ++ R    Q    FG     R+ +GI N   GY+FL+D+ GR+RWRGTG  S EE+ S++ C   L EE+
Sbjct:   56 NEDEVLKERARITDEIKRGYFLDISEIKQHGGKIALANKVIVPVLEAAKFPSLEVDYPDGRTLKFPIVSNGKVANADALPNPKASILCLTFREFSQKMINSWSVPLLDTFSDSKDVELYQVSFIDSTLLCWKPMKKLLLRTMRSSKPDGSNDALRR----QMVYHFGDHYYFRKKLGIVNLCTGYIFLLDRFGRIRWRGTGMASKEELTSLVSCTSLLLEEK 273          
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|1204893092|ref|XP_021278330.1| (mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica] >gi|1204893094|ref|XP_021278331.1| mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica] >gi|1204893096|ref|XP_021278332.1| mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica] >gi|1204893098|ref|XP_021278333.1| mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica])

HSP 1 Score: 115.161 bits (287), Expect = 6.951e-27
Identity = 75/227 (33.04%), Postives = 121/227 (53.30%), Query Frame = 0
Query:   66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272
            + +KEA   K+  ++ +E+ RGYF ++ ++ +   K+  A+K ++P   A+KFP  +      VT+  G  L+    +N            +VSLV +SFR S  +++  W  PF E F  +  + + +VSF D SWL     +K LL+   + SI+ E+     Q    FG     R+ + I N + GY+FL+DKLGR+RW+G G  + EE+ S+L C   L EE+
Sbjct:   50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAMANKIIIPAMAAVKFPGLE------VTYSDGRTLKLPIVSNGDRVDAKKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFGNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKDALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEK 268          
The following BLAST results are available for this feature:
BLAST of EWM26116.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108110|gb|EWM26116.1|0.000e+0100.00uncharacterized protein Naga_100014g49 [Nannochlor... [more]
gi|302772823|ref|XP_002969829.1|7.709e-2930.95hypothetical protein SELMODRAFT_410829 [Selaginell... [more]
gi|302806868|ref|XP_002985165.1|1.150e-2830.48hypothetical protein SELMODRAFT_424297 [Selaginell... [more]
gi|836712777|gb|AKM76484.1|1.905e-2731.60AT1G08220-like protein [Geranium incanum][more]
gi|1063490694|ref|XP_007016014.2|2.082e-2733.33PREDICTED: mitochondrial ATPase complex subunit AT... [more]
gi|1063490696|ref|XP_007016013.2|2.243e-2733.48PREDICTED: mitochondrial ATPase complex subunit AT... [more]
gi|508786377|gb|EOY33633.1|5.739e-2733.33Mitochondria isoform 2 [Theobroma cacao][more]
gi|508786376|gb|EOY33632.1|5.941e-2733.48Mitochondria isoform 1 [Theobroma cacao] >gi|50878... [more]
gi|836712773|gb|AKM76482.1|5.965e-2731.98AT1G08220-like protein [Erodium trifolium][more]
gi|1204893092|ref|XP_021278330.1|6.951e-2733.04mitochondrial ATPase complex subunit ATP10 isoform... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4571rna4571Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications