EWM26102.1, cds4556 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|585108096|gb|EWM26102.1| (Zinc finger, HIT-type [Nannochloropsis gaditana]) HSP 1 Score: 390.963 bits (1003), Expect = 1.188e-137 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query: 1 MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYEAGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFATS 189
MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYEAGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFATS
Sbjct: 1 MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYEAGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFATS 189
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|298715429|emb|CBJ28040.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 166.007 bits (419), Expect = 7.444e-49 Identity = 96/194 (49.48%), Postives = 117/194 (60.31%), Query Frame = 0
Query: 1 MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYV---DSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYEAGYERSNGPNYLTAA---AQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFAT 188
MS +KR AWD + +G +TK KR+SGR VLSK+M+VVDEETR +V+DARLEALEADNY E+ G E D+ + D E RP+ + A + + + + K L Q +YE E S P TA A S P R FCSVCGY GLYTCTRCG R+CSSKC E HKETRCLKFA+
Sbjct: 1 MSQSKRKAWDATVQASGHVPTRTK---TKRASGRTVVLSKSMRVVDEETRNQVKDARLEALEADNYTEDHGGEQDDEFALDEDDERGDRPRGRSRAGKAPGNKNKNKGEKDPWKERKFKSLHQVLYELTNELSAYPGGATAVSIEAPVSKHPPRAFCSVCGYHGLYTCTRCGSRFCSSKCYEQHKETRCLKFAS 191
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|669164452|ref|XP_008617788.1| (hypothetical protein SDRG_13475 [Saprolegnia diclina VS20] >gi|530730551|gb|EQC28793.1| hypothetical protein SDRG_13475 [Saprolegnia diclina VS20]) HSP 1 Score: 148.288 bits (373), Expect = 8.067e-42 Identity = 83/193 (43.01%), Postives = 115/193 (59.59%), Query Frame = 0
Query: 2 STNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRK------KPLAQWVYE-AGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFA 187
S N + WD+ M +G + +K R+SGR +SKAM++VDEETR++VR+ARL+ALEADNYVE + DE E+ PK + + R+ + + + SS R+ K LAQ V+E G GPNY+TAA +P++ P R FC VCG + Y C RCG R+CS KC + H+ET CLKF+
Sbjct: 3 SKNAKRQWDQTMASSGLALPAAPRK---RNSGRAVKISKAMKLVDEETRKQVRNARLDALEADNYVEPTEDGEDEDLYIEEDAMGPK---KPSKSRAKGKAKAPIVPVSSSGRRRVVRKVKSLAQLVFEECGTGEGLGPNYVTAAVKPATTPPRKFCVVCGLFSNYACGRCGSRFCSVKCGDQHRETGCLKFS 189
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|813191685|ref|XP_012207725.1| (hypothetical protein SPRG_13358 [Saprolegnia parasitica CBS 223.65] >gi|641527246|gb|KDO21548.1| hypothetical protein SPRG_13358 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 143.665 bits (361), Expect = 6.280e-40 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0
Query: 2 STNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDE-AYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRK------KPLAQWVY-EAGYERSNGPNYLTAAAQPSSLPTRCFCSVCGY------WGLYTCTRCGMRYCSSKCAETHKETRCLKFA 187
S N + WD+ M +G + +K R+SGR +SKAM+ VDEETR++VR+ARL+ALEADNYVE + DE Y++ + G PK ++ + R+ + + + SS R+ K LAQ V+ E G GPNY+TAA +P++ P R FC VCGY + Y C RCG R+CS KC + H+ET CLKF+
Sbjct: 3 SKNAKRQWDQTMASSGLALPTAPRK---RNSGRAVKISKAMKHVDEETRKQVRNARLDALEADNYVEPTEDGDDEDLYIEDDAVG-PK---KSSKSRAKGKAKAPVVPISSSGRRRVVRKVKSLAQLVFEECGTGEGLGPNYVTAAVKPATTPPRKFCVVCGYPFDRTLFSNYACGRCGSRFCSVKCGDQHRETGCLKFS 195
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|567948925|gb|ETK74661.1| (hypothetical protein L915_18600 [Phytophthora parasitica] >gi|570938958|gb|ETP04215.1| hypothetical protein F441_18987 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 141.739 bits (356), Expect = 3.184e-39 Identity = 86/179 (48.04%), Postives = 111/179 (62.01%), Query Frame = 0
Query: 18 AGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENA----GEEM-DEAYVDSEEEGR--PKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYE--AGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFA 187
AG + T K KR SGR LS AM++VD++TR EVR+ARL+ALEADN+ E+A G ++ DEAYVD EE G RE RK+ +R + K ++ K LAQ V+E + + GPNYL AAA PS+ P R FC VCG++ Y C RCG RYCS C + HKE+ C+KF
Sbjct: 25 AGGRHTAAK--KRLSGRTHKLSAAMRLVDDDTRNEVRNARLDALEADNFGEDADDGDGTQVGDEAYVDEEEGGTVASASGREVIRKK---RRVVVPGK--KKWKVKSLAQLVFEELGNGDNAEGPNYLAAAAGPSTHPARRFCCVCGFFANYNCRRCGSRYCSVSCGDQHKESGCMKFG 196
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|570315162|gb|ETO63110.1| (hypothetical protein F444_19126 [Phytophthora parasitica P1976]) HSP 1 Score: 140.969 bits (354), Expect = 7.580e-39 Identity = 87/179 (48.60%), Postives = 110/179 (61.45%), Query Frame = 0
Query: 18 AGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENA----GEEM-DEAYVDSEEEGR--PKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYE--AGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFA 187
AG + T K KR SGR LS AM+ VD+ETR EVR+ARL+ALEADN+ E+A G ++ DEAYVD EE G RE RK+ +R + K ++ K LAQ V+E + + GPNYL AAA PS+ P R FC VCG++ Y C RCG RYCS C + HKE+ C+KF
Sbjct: 25 AGGRHTAAK--KRLSGRTHKLSAAMRRVDDETRNEVRNARLDALEADNFGEDADDGDGTQVGDEAYVDEEEGGTVASASGREVIRKK---RRVVVPGK--KKWKVKSLAQLVFEELGNGDNAEGPNYLAAAAGPSTHPARRFCCVCGFFANYNCRRCGSRYCSVSCGDQHKESGCMKFG 196
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|567977591|gb|ETL28091.1| (hypothetical protein L916_18503 [Phytophthora parasitica]) HSP 1 Score: 139.043 bits (349), Expect = 3.750e-38 Identity = 85/179 (47.49%), Postives = 110/179 (61.45%), Query Frame = 0
Query: 18 AGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENA----GEEM-DEAYVDSEEEGR--PKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYE--AGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFA 187
AG + T K KR SGR L AM++VD++TR EVR+ARL+ALEADN+ E+A G ++ DEAYVD EE G RE RK+ +R + K ++ K LAQ V+E + + GPNYL AAA PS+ P R FC VCG++ Y C RCG RYCS C + HKE+ C+KF
Sbjct: 25 AGGRHTAAK--KRLSGRTHKLCAAMRLVDDDTRNEVRNARLDALEADNFGEDADDGDGTQVGDEAYVDEEEGGTVASASGREVIRKK---RRVVVPGK--KKWKVKSLAQLVFEELGNGDNAEGPNYLAAAAGPSTHPARRFCCVCGFFANYNCRRCGSRYCSVSCGDQHKESGCMKFG 196
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|1173935943|gb|OQR86981.1| (hypothetical protein ACHHYP_09634 [Achlya hypogyna]) HSP 1 Score: 138.272 bits (347), Expect = 1.231e-37 Identity = 85/221 (38.46%), Postives = 116/221 (52.49%), Query Frame = 0
Query: 2 STNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEEGRP---KVKREAKRKR-------SMAQRQQMANKLISSFRKKPLAQWVYE--AGYERSNGPNYLTAAAQPSSLPTRCFCSVCGY------------------------WGLYTCTRCGMRYCSSKCAETHKETRCLKF 186
S N + WD+ M +G + Q +K R SGR +SKAM+ VDEETR++VR+ARL+ALEADNYVE + DE ++ G P +K AK K S++ R+++ K+ K LA ++E E + PNY+TAA +P+ P R FC VCGY + YTC RCG R+CS +C + HKET CLKF
Sbjct: 3 SKNAKRQWDQTMASSGLALPQAPRK---RYSGRTVKISKAMKHVDEETRKQVRNARLDALEADNYVEPTDDGEDEDLYIEDDSGTPSKKPLKSRAKAKSKGTVVPVSISGRRRIVRKV------KSLAHLIFEECGTGEDTQRPNYITAAVKPAKTPPRHFCVVCGYPFRYSLHAACTSKTVLRSLTRRTLFSDYTCGRCGSRFCSVRCGDQHKETGCLKF 214
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|698806312|ref|XP_009836185.1| (hypothetical protein H257_11047 [Aphanomyces astaci] >gi|574109022|gb|ETV74527.1| hypothetical protein H257_11047 [Aphanomyces astaci]) HSP 1 Score: 137.502 bits (345), Expect = 1.459e-37 Identity = 77/186 (41.40%), Postives = 109/186 (58.60%), Query Frame = 0
Query: 4 NKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENA-GEEMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYEAGYE--RSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKF 186
N + WD+ M +G + + K KR SGR +SKAM+ VDEETRR+VR+ARL+ALEADNY+E+ G + D +D +++ + K ++K K + Q Q + + K L Q ++E + S NY+TAA +P+ P R FC VCG YTC RCG ++C +C HKET CLKF
Sbjct: 5 NAKRQWDQTMASSGLAVPGSAKVSRKRFSGRTVKISKAMKHVDEETRRQVRNARLDALEADNYMESTDGADEDMFVLDDDDDAKKPTKPKSKAKANKHQVPQALGRHRMVRKVKSLRQLIFEECGDGMSSTDINYVTAAVKPAKTPPRHFCCVCGLLSSYTCGRCGSKFCCVRCGNQHKETGCLKF 190
BLAST of EWM26102.1 vs. NCBI_GenBank
Match: gi|695384089|ref|XP_009517902.1| (hypothetical protein PHYSODRAFT_476336 [Phytophthora sojae] >gi|348690813|gb|EGZ30627.1| hypothetical protein PHYSODRAFT_476336 [Phytophthora sojae]) HSP 1 Score: 134.806 bits (338), Expect = 5.727e-37 Identity = 74/163 (45.40%), Postives = 101/163 (61.96%), Query Frame = 0
Query: 32 SGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGE-----EMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYE--AGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFA 187
+GR LS AM+ VD++TR EVR+ARL+ALEADN+ E+A E + DEAYVD EE G A + + +++++A ++ K LAQ V+E + + GPNYLTAA P + P R FC VCG++ Y C RCG RYCS C + HKE+ C+KF
Sbjct: 4 AGRTHKLSAAMRRVDDDTRNEVRNARLDALEADNFGEDADEGDGTQDGDEAYVDEEEGG---AGTAASGREPVRKKRRVAASSKKKWKVKSLAQLVFEELGNGDNAEGPNYLTAAVGPPTHPPRRFCCVCGFFANYNCRRCGSRYCSVGCGDQHKESGCMKFG 163 The following BLAST results are available for this feature:
BLAST of EWM26102.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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