EWM26153.1, cds4553 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|585108147|gb|EWM26153.1| (proteasome subunit alpha type 7 [Nannochloropsis gaditana]) HSP 1 Score: 521.161 bits (1341), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES 254
MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES 254
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|298710464|emb|CBJ25528.1| (proteasome subunit alpha type 7 [Ectocarpus siliculosus]) HSP 1 Score: 363.614 bits (932), Expect = 7.756e-125 Identity = 168/226 (74.34%), Postives = 198/226 (87.61%), Query Frame = 0
Query: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATL 226
MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK V+LGVERRATAKLQDPRTI+KI KID H+TLAFAGLTADARVLV+KARLECQSYRLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG + DG+ +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK WA+D++E A +L +K LLEVVDSGAKNME+A++ G+ M+ E +
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMM 226
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|669147394|ref|XP_008609259.1| (20S proteasome subunit alpha 4 [Saprolegnia diclina VS20] >gi|530738855|gb|EQC37097.1| 20S proteasome subunit alpha 4 [Saprolegnia diclina VS20]) HSP 1 Score: 353.599 bits (906), Expect = 8.329e-121 Identity = 166/248 (66.94%), Postives = 207/248 (83.47%), Query Frame = 0
Query: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGS 248
MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+ VGVRG V+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEYVARYIA+ QQ+YTQRGGVRPFG+S +IAG + G LYQTDP+GT++AWKA A GRN + +E+LEK +A D+ EE AIRL +K LLEVV++G+KN+EVAV+ QG + +++AT+ + ASIE E+E+A+ A + S
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYAQDMNEEGAIRLAIKALLEVVEAGSKNIEVAVVRQGGVVSTVEDATVEIVCASIEKEKEDARLGAESKS 247
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|813127846|ref|XP_012197478.1| (hypothetical protein SPRG_03500 [Saprolegnia parasitica CBS 223.65] >gi|641537727|gb|KDO31571.1| hypothetical protein SPRG_03500 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 349.747 bits (896), Expect = 2.176e-119 Identity = 163/248 (65.73%), Postives = 206/248 (83.06%), Query Frame = 0
Query: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGS 248
MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+ VGVRG V+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEYVARY+A+ QQ+YTQRGGVRPFG+S +IAG + G LYQTDP+GT++AWKA A GRN + +E+LEK + D+ EE AIRL +K LLEVV++G+KN+EVAV+ +G + +++AT+ + ASIE E+E+A+ A + S
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYVAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMNEEGAIRLAIKALLEVVEAGSKNIEVAVVRRGGIVSTVEDATVEVVCASIEKEKEDARLGAESKS 247
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|673043147|ref|XP_008875534.1| (hypothetical protein H310_10839 [Aphanomyces invadans] >gi|574468766|gb|ETV95783.1| hypothetical protein H310_10839 [Aphanomyces invadans]) HSP 1 Score: 348.977 bits (894), Expect = 5.503e-119 Identity = 163/241 (67.63%), Postives = 203/241 (84.23%), Query Frame = 0
Query: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAK 241
MASRYDRAITVFSPDGHLFQVEYA+EAVKRG+ VGVRG V+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGLTADARVLVNKARLECQSYRLT EDAP+VEYVARY+A+ QQ+YTQRGGVRPFG+S +IAG + G LYQTDP+GT++AWKA A GRN + +E+LEK + D++EE A+RL VK LLEVV++G+KN+EVAV+ +G + +AT+ ++ ASIE E+E+A+
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMDEEGAVRLAVKALLEVVEAGSKNIEVAVVRRGGVSSTVPDATVESVCASIEKEKEDAR 240
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|223993157|ref|XP_002286262.1| (proteasome subunit alpha type 7-1 [Thalassiosira pseudonana CCMP1335] >gi|220977577|gb|EED95903.1| proteasome subunit alpha type 7-1 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 345.51 bits (885), Expect = 1.118e-117 Identity = 165/249 (66.27%), Postives = 202/249 (81.12%), Query Frame = 0
Query: 5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKE 253
YDRAITVFSPDGHLFQVEYA+EAV+RGS+AVGVRGK V+L VERRA AKLQDPRTI+KI +DE LAFAGLTADARVL+NK R E QSYRLT EDAP+VEY+ARYIARTQQKYTQRGGVRPFG++ ++AG + +GS VLYQTDPAGT+S WKA +GGRN+ +++E+LEK W + LEE+ A+R++V+ LLEVVDSGAKNME+ V+ G +L+E + + SIEAE EE K ++G G + E
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRTEAQSYRLTCEDAPSVEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGSPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEEDKAVRMSVQALLEVVDSGAKNMEICVVRVGGKKTILEEKDVDEIVKSIEAEAEEGK---TSGGGAADE 248
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|953502006|emb|CEG36937.1| (proteasome subunit alpha type 7 [Plasmopara halstedii]) HSP 1 Score: 345.51 bits (885), Expect = 1.469e-117 Identity = 164/244 (67.21%), Postives = 206/244 (84.43%), Query Frame = 0
Query: 3 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASA 246
SRYDRAITVFSPDGHLFQVEYA+EAVK+G+ AVGVRG+++V+L VER+ TAKLQDPRT++KICK+D+H+++AFAGLTADARVLVNKARLECQSYRLT EDAP+VEYVARY+AR QQKYTQRGGVRPFG+S +IAG + G LYQTDP+GT+SAWKA A GRNSSN++E+LEK + ++ EE AI L +K LLEVV+SG+KN+E+ V+ G + L++ + AL IE E++EA ++ASA
Sbjct: 2 SRYDRAITVFSPDGHLFQVEYAMEAVKKGAVAVGVRGQNAVVLAVERKETAKLQDPRTVRKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCDSQGIPQLYQTDPSGTFSAWKANAT-GRNSSNIREFLEKHYVENATEEEAITLAIKALLEVVESGSKNIEIVVVRVGGKVSPLEDEKVNALCDKIE-EEKEAARQASA 243
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|301122971|ref|XP_002909212.1| (proteasome subunit alpha type-7, threonine protease family T01A, putative [Phytophthora infestans T30-4] >gi|262099974|gb|EEY58026.1| proteasome subunit alpha type-7, threonine protease family T01A, putative [Phytophthora infestans T30-4]) HSP 1 Score: 340.502 bits (872), Expect = 1.142e-115 Identity = 164/252 (65.08%), Postives = 204/252 (80.95%), Query Frame = 0
Query: 3 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES 254
SRYDRAITVFSPDGHLFQVEYA+EA G+ VGVRGK++V+L VER+ TAKLQDPRT++KICK+D+H+++AFAGLTADARVLVNKARLECQSYRLT EDAP+VEYVARY+AR QQKYTQRGGVRPFG+S +IAG N G LYQTDP+GT+SAWKA A GRNS+N++E+LEK + ++ EE A+ L +K LLEVV+SG+KN+E+ V+ G + L++ + L IEAE+E A++ SGESK S
Sbjct: 2 SRYDRAITVFSPDGHLFQVEYAMEA---GAVVVGVRGKAAVVLAVERKETAKLQDPRTVRKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCNDQGVPQLYQTDPSGTFSAWKANAT-GRNSTNIREFLEKNYVENATEEEAVTLAIKALLEVVESGSKNIEIVVVRAGGKVSPLEDDKVNELCDKIEAEKEAARQ----ASGESKSS 245
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|397609717|gb|EJK60490.1| (hypothetical protein THAOC_19150 [Thalassiosira oceanica]) HSP 1 Score: 339.347 bits (869), Expect = 1.880e-115 Identity = 158/236 (66.95%), Postives = 193/236 (81.78%), Query Frame = 0
Query: 5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEA 240
YDRAITVFSPDGHLFQVEYA+EAV+RGS+AVGVRGK V+L VERRA AKLQDPRTI+KI +DE LAFAGLTADARVL+NK R+E QSYRLT EDAP+ EY+ARYIARTQQKYTQRGGVRPFG++ ++AG + +G VLYQTDPAGT+S WKA +GGRN+ +++E+LEK W + LEE AIR+ ++ LLEVVDSGAKNME+ V+ G ++DE + + +IEAE EE+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRIEAQSYRLTCEDAPSAEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGKPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEESKAIRMGIQALLEVVDSGAKNMEICVVRPGGAKSIMDEKDVDEVVKAIEAESEES 238
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|1173958401|gb|OQS04766.1| (proteasome subunit alpha type-7, threonine protease family T01A [Thraustotheca clavata]) HSP 1 Score: 338.576 bits (867), Expect = 6.694e-115 Identity = 161/241 (66.80%), Postives = 204/241 (84.65%), Query Frame = 0
Query: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAK 241
MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+ VGVRG SV+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGL ADARVL+NKARLECQSYRLT EDAP+VEYVARYIA+ QQ+YTQRGGVRPFG+S +IAG + G LYQTDP+GT++AWKA A GRN + +E+LEK + D+ E++AIRL++K LLEVV++G+KN+EVAV+ +G + + +AT+ + ASIE E+E+A+
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGTDSVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLNADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKVQQRYTQRGGVRPFGISMLIAGCDAQGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMNEDDAIRLSIKALLEVVEAGSKNIEVAVVRRGGVVTTVPDATVEIVCASIEKEKEDAR 240 The following BLAST results are available for this feature:
BLAST of EWM26153.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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