EWM26153.1, cds4553 (CDS) Nannochloropsis gaditana

Overview
NameEWM26153.1
Unique Namecds4553
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:930405..930415 -
Alignment locationCM002463.1:929322..930075 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26153.1
Productproteasome subunit alpha type 7
Orig transcript idgnl|cribi|Naga_100014g43.9330.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:930405..930415 -
CM002463.1supercontigCM002463.1:929322..930075 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Vocabulary: INTERPRO
TermDefinition
IPR023332Proteasome_suA-type
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR000426Proteasome_asu_N
Homology
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|585108147|gb|EWM26153.1| (proteasome subunit alpha type 7 [Nannochloropsis gaditana])

HSP 1 Score: 521.161 bits (1341), Expect = 0.000e+0
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES 254
            MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES 254          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|298710464|emb|CBJ25528.1| (proteasome subunit alpha type 7 [Ectocarpus siliculosus])

HSP 1 Score: 363.614 bits (932), Expect = 7.756e-125
Identity = 168/226 (74.34%), Postives = 198/226 (87.61%), Query Frame = 0
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATL 226
            MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK  V+LGVERRATAKLQDPRTI+KI KID H+TLAFAGLTADARVLV+KARLECQSYRLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG + DG+  +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK WA+D++E  A +L +K LLEVVDSGAKNME+A++  G+   M+ E  +
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMM 226          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|669147394|ref|XP_008609259.1| (20S proteasome subunit alpha 4 [Saprolegnia diclina VS20] >gi|530738855|gb|EQC37097.1| 20S proteasome subunit alpha 4 [Saprolegnia diclina VS20])

HSP 1 Score: 353.599 bits (906), Expect = 8.329e-121
Identity = 166/248 (66.94%), Postives = 207/248 (83.47%), Query Frame = 0
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGS 248
            MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG   V+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEYVARYIA+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  GRN  + +E+LEK +A D+ EE AIRL +K LLEVV++G+KN+EVAV+ QG  +  +++AT+  + ASIE E+E+A+  A + S
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYAQDMNEEGAIRLAIKALLEVVEAGSKNIEVAVVRQGGVVSTVEDATVEIVCASIEKEKEDARLGAESKS 247          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|813127846|ref|XP_012197478.1| (hypothetical protein SPRG_03500 [Saprolegnia parasitica CBS 223.65] >gi|641537727|gb|KDO31571.1| hypothetical protein SPRG_03500 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 349.747 bits (896), Expect = 2.176e-119
Identity = 163/248 (65.73%), Postives = 206/248 (83.06%), Query Frame = 0
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGS 248
            MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG   V+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEYVARY+A+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  GRN  + +E+LEK +  D+ EE AIRL +K LLEVV++G+KN+EVAV+ +G  +  +++AT+  + ASIE E+E+A+  A + S
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYVAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMNEEGAIRLAIKALLEVVEAGSKNIEVAVVRRGGIVSTVEDATVEVVCASIEKEKEDARLGAESKS 247          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|673043147|ref|XP_008875534.1| (hypothetical protein H310_10839 [Aphanomyces invadans] >gi|574468766|gb|ETV95783.1| hypothetical protein H310_10839 [Aphanomyces invadans])

HSP 1 Score: 348.977 bits (894), Expect = 5.503e-119
Identity = 163/241 (67.63%), Postives = 203/241 (84.23%), Query Frame = 0
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAK 241
            MASRYDRAITVFSPDGHLFQVEYA+EAVKRG+  VGVRG   V+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGLTADARVLVNKARLECQSYRLT EDAP+VEYVARY+A+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  GRN  + +E+LEK +  D++EE A+RL VK LLEVV++G+KN+EVAV+ +G     + +AT+ ++ ASIE E+E+A+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMDEEGAVRLAVKALLEVVEAGSKNIEVAVVRRGGVSSTVPDATVESVCASIEKEKEDAR 240          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|223993157|ref|XP_002286262.1| (proteasome subunit alpha type 7-1 [Thalassiosira pseudonana CCMP1335] >gi|220977577|gb|EED95903.1| proteasome subunit alpha type 7-1 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 345.51 bits (885), Expect = 1.118e-117
Identity = 165/249 (66.27%), Postives = 202/249 (81.12%), Query Frame = 0
Query:    5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKE 253
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+AVGVRGK  V+L VERRA AKLQDPRTI+KI  +DE   LAFAGLTADARVL+NK R E QSYRLT EDAP+VEY+ARYIARTQQKYTQRGGVRPFG++ ++AG + +GS VLYQTDPAGT+S WKA  +GGRN+ +++E+LEK W + LEE+ A+R++V+ LLEVVDSGAKNME+ V+  G    +L+E  +  +  SIEAE EE K   ++G G + E
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRTEAQSYRLTCEDAPSVEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGSPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEEDKAVRMSVQALLEVVDSGAKNMEICVVRVGGKKTILEEKDVDEIVKSIEAEAEEGK---TSGGGAADE 248          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|953502006|emb|CEG36937.1| (proteasome subunit alpha type 7 [Plasmopara halstedii])

HSP 1 Score: 345.51 bits (885), Expect = 1.469e-117
Identity = 164/244 (67.21%), Postives = 206/244 (84.43%), Query Frame = 0
Query:    3 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASA 246
            SRYDRAITVFSPDGHLFQVEYA+EAVK+G+ AVGVRG+++V+L VER+ TAKLQDPRT++KICK+D+H+++AFAGLTADARVLVNKARLECQSYRLT EDAP+VEYVARY+AR QQKYTQRGGVRPFG+S +IAG +  G   LYQTDP+GT+SAWKA A  GRNSSN++E+LEK + ++  EE AI L +K LLEVV+SG+KN+E+ V+  G  +  L++  + AL   IE E++EA ++ASA
Sbjct:    2 SRYDRAITVFSPDGHLFQVEYAMEAVKKGAVAVGVRGQNAVVLAVERKETAKLQDPRTVRKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCDSQGIPQLYQTDPSGTFSAWKANAT-GRNSSNIREFLEKHYVENATEEEAITLAIKALLEVVESGSKNIEIVVVRVGGKVSPLEDEKVNALCDKIE-EEKEAARQASA 243          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|301122971|ref|XP_002909212.1| (proteasome subunit alpha type-7, threonine protease family T01A, putative [Phytophthora infestans T30-4] >gi|262099974|gb|EEY58026.1| proteasome subunit alpha type-7, threonine protease family T01A, putative [Phytophthora infestans T30-4])

HSP 1 Score: 340.502 bits (872), Expect = 1.142e-115
Identity = 164/252 (65.08%), Postives = 204/252 (80.95%), Query Frame = 0
Query:    3 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKES 254
            SRYDRAITVFSPDGHLFQVEYA+EA   G+  VGVRGK++V+L VER+ TAKLQDPRT++KICK+D+H+++AFAGLTADARVLVNKARLECQSYRLT EDAP+VEYVARY+AR QQKYTQRGGVRPFG+S +IAG N  G   LYQTDP+GT+SAWKA A  GRNS+N++E+LEK + ++  EE A+ L +K LLEVV+SG+KN+E+ V+  G  +  L++  +  L   IEAE+E A++     SGESK S
Sbjct:    2 SRYDRAITVFSPDGHLFQVEYAMEA---GAVVVGVRGKAAVVLAVERKETAKLQDPRTVRKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCNDQGVPQLYQTDPSGTFSAWKANAT-GRNSTNIREFLEKNYVENATEEEAVTLAIKALLEVVESGSKNIEIVVVRAGGKVSPLEDDKVNELCDKIEAEKEAARQ----ASGESKSS 245          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|397609717|gb|EJK60490.1| (hypothetical protein THAOC_19150 [Thalassiosira oceanica])

HSP 1 Score: 339.347 bits (869), Expect = 1.880e-115
Identity = 158/236 (66.95%), Postives = 193/236 (81.78%), Query Frame = 0
Query:    5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEA 240
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+AVGVRGK  V+L VERRA AKLQDPRTI+KI  +DE   LAFAGLTADARVL+NK R+E QSYRLT EDAP+ EY+ARYIARTQQKYTQRGGVRPFG++ ++AG + +G  VLYQTDPAGT+S WKA  +GGRN+ +++E+LEK W + LEE  AIR+ ++ LLEVVDSGAKNME+ V+  G    ++DE  +  +  +IEAE EE+
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRIEAQSYRLTCEDAPSAEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGKPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEESKAIRMGIQALLEVVDSGAKNMEICVVRPGGAKSIMDEKDVDEVVKAIEAESEES 238          
BLAST of EWM26153.1 vs. NCBI_GenBank
Match: gi|1173958401|gb|OQS04766.1| (proteasome subunit alpha type-7, threonine protease family T01A [Thraustotheca clavata])

HSP 1 Score: 338.576 bits (867), Expect = 6.694e-115
Identity = 161/241 (66.80%), Postives = 204/241 (84.65%), Query Frame = 0
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAK 241
            MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG  SV+L VER+ TAKLQDPRT++KICK+D+H+TLAFAGL ADARVL+NKARLECQSYRLT EDAP+VEYVARYIA+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  GRN  + +E+LEK +  D+ E++AIRL++K LLEVV++G+KN+EVAV+ +G  +  + +AT+  + ASIE E+E+A+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGTDSVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLNADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKVQQRYTQRGGVRPFGISMLIAGCDAQGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMNEDDAIRLSIKALLEVVEAGSKNIEVAVVRRGGVVTTVPDATVEIVCASIEKEKEDAR 240          
The following BLAST results are available for this feature:
BLAST of EWM26153.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108147|gb|EWM26153.1|0.000e+0100.00proteasome subunit alpha type 7 [Nannochloropsis g... [more]
gi|298710464|emb|CBJ25528.1|7.756e-12574.34proteasome subunit alpha type 7 [Ectocarpus silicu... [more]
gi|669147394|ref|XP_008609259.1|8.329e-12166.9420S proteasome subunit alpha 4 [Saprolegnia diclin... [more]
gi|813127846|ref|XP_012197478.1|2.176e-11965.73hypothetical protein SPRG_03500 [Saprolegnia paras... [more]
gi|673043147|ref|XP_008875534.1|5.503e-11967.63hypothetical protein H310_10839 [Aphanomyces invad... [more]
gi|223993157|ref|XP_002286262.1|1.118e-11766.27proteasome subunit alpha type 7-1 [Thalassiosira p... [more]
gi|953502006|emb|CEG36937.1|1.469e-11767.21proteasome subunit alpha type 7 [Plasmopara halste... [more]
gi|301122971|ref|XP_002909212.1|1.142e-11565.08proteasome subunit alpha type-7, threonine proteas... [more]
gi|397609717|gb|EJK60490.1|1.880e-11566.95hypothetical protein THAOC_19150 [Thalassiosira oc... [more]
gi|1173958401|gb|OQS04766.1|6.694e-11566.80proteasome subunit alpha type-7, threonine proteas... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4565rna4565Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications