EWM26132.1, cds4542 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|585108126|gb|EWM26132.1| (mpv17-like protein [Nannochloropsis gaditana] >gi|585108127|gb|EWM26133.1| mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 391.734 bits (1005), Expect = 5.758e-138 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
Query: 1 MFGRLWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAAAK 190
MFGRLWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAAAK
Sbjct: 1 MFGRLWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAAAK 190
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|147905308|ref|NP_001090480.1| (uncharacterized protein LOC779393 [Xenopus laevis] >gi|114107768|gb|AAI23161.1| MGC154358 protein [Xenopus laevis]) HSP 1 Score: 356.681 bits (914), Expect = 6.811e-124 Identity = 167/188 (88.83%), Postives = 178/188 (94.68%), Query Frame = 0
Query: 1 MFGRLWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAA 188
MFGRLW++YN ALE NPLLIKA+TSLTGFT+GD+LAQKFV PD+EKGYDLMRTVRLGSFGFLVHGPTGH+FY WLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSF DIQ KIKNDL TAVVGSWTVWIPAHF+NFRFVPS+QRLLYINSIQIGYNIFLSFLGNKKVD+ E +K A
Sbjct: 1 MFGRLWTKYNAALETNPLLIKAVTSLTGFTLGDILAQKFVMPDKEKGYDLMRTVRLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFADIQTKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDEPEVVKEA 188
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|299471154|emb|CBN79011.1| (peroxisomal membrane protein-related [Ectocarpus siliculosus]) HSP 1 Score: 285.034 bits (728), Expect = 1.667e-95 Identity = 133/184 (72.28%), Postives = 160/184 (86.96%), Query Frame = 0
Query: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAA 188
+W+ YN AL PLL+KA+TS TGFT+GD+LAQKF++P+++ YD MRT+RLG+FG LVHGPTGH+FYG LD ++PGT TVA+KVAIDQ +WNP FGVMFF+YLGLAEGKS DIQ KIKNDLATAV+GSWTVWIPAH INF+FVP++QRLLYIN+IQIGYNIFLSFLGNKK DD + +K+A
Sbjct: 4 IWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPEDD--YDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKADD-DSVKSA 184
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|1210515703|dbj|GAX25226.1| (hypothetical protein FisN_5Lh310 [Fistulifera solaris] >gi|1210524204|dbj|GAX16933.1| hypothetical protein FisN_5Hh310 [Fistulifera solaris]) HSP 1 Score: 268.085 bits (684), Expect = 3.399e-89 Identity = 129/176 (73.30%), Postives = 147/176 (83.52%), Query Frame = 0
Query: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVD 180
LW++YN L+ PLL KALTSLTGFT+GDVLAQKFV P +K YDLMRTVRLGSFGFL+HG TGH+FYG+LD ++PGTA TVATKVAIDQ +WNP FG+MFF YL EGKSF D KIK DL TAV+GSW VW+PAH INF F+P +QRLLYINSIQIGYN+FLSFLGNKKV+
Sbjct: 4 LWARYNKMLDAQPLLTKALTSLTGFTLGDVLAQKFVEP-TDKPYDLMRTVRLGSFGFLIHGTTGHYFYGFLDGKLPGTAPMTVATKVAIDQTIWNPIFGLMFFGYLNFVEGKSFEDYTNKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNVFLSFLGNKKVE 178
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|219126254|ref|XP_002183376.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405132|gb|EEC45076.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 254.988 bits (650), Expect = 6.532e-84 Identity = 119/177 (67.23%), Postives = 143/177 (80.79%), Query Frame = 0
Query: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDD 181
LW++YN L+ PLL KALTS+TGF++GD+LAQ F+ + +KGYD MRT R+GSFGFL+HG TGH+FYG+LD ++PGTA TVA+KVAIDQ +WNP FG MFF YL L EGKS D KIK DL TAV+GSW VW+PAH INF FVP QRLLYIN+IQIGYN+FLSFLGNK V++
Sbjct: 4 LWARYNSMLDAQPLLTKALTSMTGFSLGDILAQCFIE-EGDKGYDPMRTFRMGSFGFLLHGTTGHYFYGFLDSKLPGTAPMTVASKVAIDQTIWNPIFGCMFFGYLNLMEGKSLDDYTTKIKTDLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYNVFLSFLGNKSVEE 179
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|397623117|gb|EJK66898.1| (hypothetical protein THAOC_12131, partial [Thalassiosira oceanica]) HSP 1 Score: 253.062 bits (645), Expect = 2.773e-83 Identity = 122/172 (70.93%), Postives = 141/172 (81.98%), Query Frame = 0
Query: 13 LEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEE 184
LE PLL KALTSLTGF+IGD+LAQKFV D+ K YD MRT+RLGSFGF VHG TGH+FYG+LD ++PGT +TVATKV IDQ +WNP FG+MFF YL + EGKSF + K+K DL TAV+GSW VW+PAH INF FVP +QRLLYINSIQIGYNIFLSFLGNKKVD ++
Sbjct: 1 LEAQPLLTKALTSLTGFSIGDILAQKFVN-DDGKPYDPMRTLRLGSFGFFVHGTTGHYFYGFLDSKLPGTKPQTVATKVLIDQTMWNPIFGLMFFGYLNVCEGKSFEEYTKKVKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINSIQIGYNIFLSFLGNKKVDGEDK 171
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|1072235331|gb|OEU20060.1| (hypothetical protein FRACYDRAFT_167937 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 248.825 bits (634), Expect = 1.476e-81 Identity = 120/179 (67.04%), Postives = 138/179 (77.09%), Query Frame = 0
Query: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTE 183
LW++YN L+ PLL K TSLTGFT+GD+LAQKFV P +K YD+MRTVRLGSFGFL HG TGH+FYG LD ++PGT TVATKV IDQ +WNP FG FF YL EGKS+ D K+ DL TAV+GSW VW+PAH INF FVP QRLLYIN+IQIGYNIFLSFLGNK VD+ +
Sbjct: 4 LWARYNKLLDAQPLLTKCFTSLTGFTVGDILAQKFVEP-SDKPYDVMRTVRLGSFGFLFHGSTGHYFYGLLDSKLPGTKPVTVATKVIIDQTIWNPIFGCAFFGYLNAVEGKSWNDYTKKLNADLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYNIFLSFLGNKAVDEEK 181
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|223995359|ref|XP_002287363.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976479|gb|EED94806.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 244.202 bits (622), Expect = 7.617e-80 Identity = 119/169 (70.41%), Postives = 135/169 (79.88%), Query Frame = 0
Query: 18 LLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELK 186
LL KALTS TGFTIGD+LAQ FV D+ K YD+MRTVRLGSFGF +HG TGH+FYG+LD + PGT TVATKV IDQ +WNP FG+MFF YL + EGKSF D + KIK DL TAV+GSW VW+PAH INF F+P QRLLYINSIQIGYN+FLSFLGNKKV+ E K
Sbjct: 1 LLTKALTSFTGFTIGDILAQNFVN-DDGKPYDVMRTVRLGSFGFFIHGTTGHYFYGFLDSKFPGTKPLTVATKVLIDQTIWNPIFGLMFFGYLNVMEGKSFEDYKNKIKADLKTAVMGSWAVWVPAHTINFAFIPPQQRLLYINSIQIGYNVFLSFLGNKKVEGDAEKK 168
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|585110478|gb|EWM28134.1| (mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 226.098 bits (575), Expect = 4.877e-71 Identity = 107/173 (61.85%), Postives = 135/173 (78.03%), Query Frame = 0
Query: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNK 177
LW YN L+ PLL KALTS GF++GD+LAQKF+ D+ + DL R ++L FG LVHGPTGH+FYG+LD ++PGT+ TVA+KVAIDQLLWNP FG MFF +LGL EG++ I+ +I+ DL +V GSWTVW AH INFRF+P++QRLLYINS+QIGYN+FLSFL N+
Sbjct: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFI--DKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANR 274
BLAST of EWM26132.1 vs. NCBI_GenBank
Match: gi|676395101|ref|XP_009040828.1| (hypothetical protein AURANDRAFT_15607, partial [Aureococcus anophagefferens] >gi|323448544|gb|EGB04441.1| hypothetical protein AURANDRAFT_15607, partial [Aureococcus anophagefferens]) HSP 1 Score: 210.305 bits (534), Expect = 1.726e-66 Identity = 101/170 (59.41%), Postives = 125/170 (73.53%), Query Frame = 0
Query: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFL 174
+W+ Y ALEK+PLLIK LTS+ GF +GDVLAQ F+ ++ YD+ RT+R SFG LVHG T H+FYG LD +IPGT VA+KV IDQ+LWNP FG+MFF Y+G+ EG KIKNDL T V GSWTVW AH INF+F+P++QR+LYIN+IQI YN FLS +
Sbjct: 1 VWAAYEAALEKDPLLIKGLTSMIGFFLGDVLAQCFIEKSDK--YDIWRTIRFSSFGLLVHGTTSHWFYGKLDGKIPGTGAGAVASKVGIDQVLWNPIFGIMFFGYMGIFEGSGVGGTITKIKNDLLTQVTGSWTVWPIAHAINFKFIPNSQRVLYINTIQIFYNCFLSII 168 The following BLAST results are available for this feature:
BLAST of EWM26132.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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