EWM26104.1, cds4538 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|585108098|gb|EWM26104.1| (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 1530.77 bits (3962), Expect = 0.000e+0 Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 0
Query: 1 MSAYFVKTKHVTMVYVVLSMVNFLCQACPSKSCGQPFTGSTSPLRVTAHGHSSDPSRLLMPVTCAFTGLYVMGKHKKLLQQQRQHQKKVAKVTKTLTQPKVKASNKAQRKELEARMARWTKEQKEEAANRRTEEELNEEESDGEEMQENGVIERNPSASEEGEEEAEGEVDGEAEDNGYDEQRSRVNTKRKHLPSSSEAKKARKGVDEKSGTALPETPRPEAGSGEGKGSGGGAGKSGAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQFTR 737
MSAYFVKTKHVTMVYVVLSMVNFLCQACPSKSCGQPFTGSTSPLRVTAHGHSSDPSRLLMPVTCAFTGLYVMGKHKKLLQQQRQHQKKVAKVTKTLTQPKVKASNKAQRKELEARMARWTKEQKEEAANRRTEEELNEEESDGEEMQENGVIERNPSASEEGEEEAEGEVDGEAEDNGYDEQRSRVNTKRKHLPSSSEAKKARKGVDEKSGTALPETPRPEAGSGEGKGSGGGAGKSGAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQFTR
Sbjct: 1 MSAYFVKTKHVTMVYVVLSMVNFLCQACPSKSCGQPFTGSTSPLRVTAHGHSSDPSRLLMPVTCAFTGLYVMGKHKKLLQQQRQHQKKVAKVTKTLTQPKVKASNKAQRKELEARMARWTKEQKEEAANRRTEEELNEEESDGEEMQENGVIERNPSASEEGEEEAEGEVDGEAEDNGYDEQRSRVNTKRKHLPSSSEAKKARKGVDEKSGTALPETPRPEAGSGEGKGSGGGAGKSGAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQFTR 737
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|298705993|emb|CBJ29114.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0 Identity = 387/555 (69.73%), Postives = 448/555 (80.72%), Query Frame = 0
Query: 199 AKKARK-GVDEKSGTALPETPRPEAGSGE---GKGSGGGAGKS--------GAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDK-----RFGSTGHKFSANNPYGRREAGDSRQFT 736
+KARK D+ G + P E +G+ +G+GG A K FF++ F LP+S AL +L FV T IQ+ AIPPLLAG+D+V AAKTGSGKTLAFLVPV+E L KVKW+ RNGT IIISPTRELS+Q YGVLRD+ + G THGL++GGANRRAEAERLVKGV++LV TPGRLLDHLQNTKGFL RN+Q+LVIDEADRILEQGFEE+MHQIIK LPK RQTMLFSATQTKKVEDL RLS++ +PV+VG + +TV GLEQGYVVCPSDKRFLLLFTFLK+N+++KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFC+QD G+LLCTDVAARGLDIPAVDWIIQ+DPPD EYIHRVGRTARG +GKGRALLFL EEVGFL+YLR AK LNEYEFP KKVANVQ+QL++L+EKNYYLNKSAR+AYRSYLLAY+SHS KDI++VHELDLQAVARAFGF+VPPRVD+ LS++G KGR +D+ G GH FSA NPYG++ GD RQFT
Sbjct: 89 GEKARKRQRDDDQGGSAPSKRGKEGAAGKPQSSEGAGGAASKEEDKVQQLVKTGFFSDVEFSTLPLSSGMLSALAKLNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIRNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFT 643
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|397639861|gb|EJK73804.1| (hypothetical protein THAOC_04552 [Thalassiosira oceanica]) HSP 1 Score: 749.584 bits (1934), Expect = 0.000e+0 Identity = 365/542 (67.34%), Postives = 415/542 (76.57%), Query Frame = 0
Query: 229 GSGGGAGKSGAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEAD-----------------------------RILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGST-----GHKFSANNPYGRREAGDSRQFT 736
GS K FFA F LP+SD T+ AL + F MT IQSL+IP LL+GKD++ AAKTGSGKTLAFL+PVVELL K+ +RNGTGAI+ISPTREL+MQIYGV +DLC G H T+GLIMGGANRR EAERL KGV+I++ATPGRLLDHLQNTKGF+ RNL V+DEAD RILEQGFE+D+ IIK LPK RQTMLFSATQTKK+EDL R ++ V+V + ++AT GLEQGYV PSD+RFLLLFTFLK+NK +KIMVFFSSCNSVKFHAELLNYID+P MDIHGRQKQQ+RTTTFFQFC+Q KG LLCTDVAARGLDIPAVDWIIQ+DPPDDP+EYIHRVGRTARG G GRALLFLT EE GFL+YL+AAKV LNEYEFP KK+ANVQ+QL +L+EKNYYLN +ARDAYRSYLLAYASHS +DIFNVHELDL AV RAFGF+ PPRVD+ S KGPK R N K G T GH FSA+NPYG++ A D RQF+
Sbjct: 84 GSSNERKKQKKEFFAADSFTSLPLSDNTQSALATMGFTQMTKIQSLSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCTNGKHHQTYGLIMGGANRRTEAERLAKGVNIIIATPGRLLDHLQNTKGFVFRNLLAFVMDEADVRIVLFGVKYSWCYDDSHRLTTATIVPPKRILEQGFEDDLRAIIKILPKQRQTMLFSATQTKKIEDLARTAIDKSAVYVEVPSDTSLATAEGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHAELLNYIDIPCMDIHGRQKQQKRTTTFFQFCKQSKGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDEGTGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMKKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLSAVGRAFGFTAPPRVDLAFSMKGPKARRHNGQVTKGKGKTGKLANGHAFSASNPYGKKSAKDKRQFS 625
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|223998424|ref|XP_002288885.1| (atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335] >gi|220975993|gb|EED94321.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 748.429 bits (1931), Expect = 0.000e+0 Identity = 354/499 (70.94%), Postives = 410/499 (82.16%), Query Frame = 0
Query: 244 NQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRP-VFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFG-----STGHKFSANNPYGRREAGDSRQFT 736
+ F LP+SD T+ AL + F MT IQ+++IP LL+GKD++ AAKTGSGKTLAFL+PVVELL K+ +RNGTGAI+ISPTREL+MQIYGV +DLC G H T+GLI+GGANRR EAERL KGV+I++ATPGRLLDHLQNTKGF+ RNL V+DEADRILEQGFE+D+ IIK+LPK RQTMLFSATQTKKVEDL R ++ + V+V E +AT GLEQGYV PSD+RFLLLFTFLK+NK +KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTTTFFQFC+Q G LLCTDVAARGLDIPAVDWIIQ+DPPDDP+EYIHRVGRTARG GKGRALLFLT EE GFL+YL+AAKV LNEYEFP K+ANVQ+QL +L+EKNYYLN +ARDAYRSYLLAY SHS +DIF+VH LDL AV RAFGF+ PPRVD+ S KGPK R N G + GH FSA+NPYGR+E+GD RQF+
Sbjct: 19 DNTFASLPLSDLTQNALSAMGFTRMTQIQAMSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQRQTMLFSATQTKKVEDLARTAIDPKSAVYVEVPNETNLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDIFDVHSLDLAAVGRAFGFTAPPRVDLAFSVKGPKARRHNGQVMNGKGKNGKLANGHSFSASNPYGRKESGDKRQFS 517
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|219119904|ref|XP_002180703.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408176|gb|EEC48111.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 743.036 bits (1917), Expect = 0.000e+0 Identity = 372/609 (61.08%), Postives = 447/609 (73.40%), Query Frame = 0
Query: 129 NRRTEEELNEEESDGEEMQENGVIERNPSASEEGEEEAEGEVDGEAEDNGYDEQRSRVNTKRKHLPSSSEAKKARKGVDEKSGTALPETPRPEAGSGEGKGSGGGAGKSGAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGR-PVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQFT 736
N++T +E + EE + ++ SEE + E + E ED ++RS + P+ S+ K + + G E P A S + FE+LP+S+ TK L L F MT IQS AIPPLL GKD++ AAKTGSGKTLAFL+P +ELL K K+ ++NGTG I+ISPTREL+MQIYGVL++LC G H T+GLIMGGANRR E+ERL KGV+++V TPGRLLDHLQNTK F+ RNL LV+DEADRILEQGFE+D+ I+K LPK RQTMLFSATQTKKVEDL RLS+ + VFV + +AT GLEQGYV CPSDKRFLLLFTFLK+NK++KIMVFFSSCNSVK+HAELLNYID+PVMDIHGRQKQ +RTTTFFQFC+ D G +LCTDVAARGLDIP VDWIIQ+DPPDDP+EYIHRVGRTARGA G GRALLFLT EE GFL+YL+AAKV LNEY+FP KVANVQ+QL +L+E NYYLN+++RDAYRSYLLAYASHSH+DIFNVHELDLQAV AFGF+ PPRVD+ + K ++ K R +GH FSA+NPYG+R+A D RQF+
Sbjct: 5 NKKTRKEAKDLNPVTEEATSEEAVAKHEPTSEEAVAKHEPTTE-EEEDVSMKKKRSVSTSSNDEQPTESKKAKTEQVDSNEDG----EKPNFYAES------------------KDDTFENLPLSEKTKYGLNDLGFTRMTQIQSKAIPPLLTGKDLIGAAKTGSGKTLAFLIPCIELLHKAKFTSKNGTGVIVISPTRELAMQIYGVLQELCTHGKHSQTYGLIMGGANRRTESERLAKGVNVIVCTPGRLLDHLQNTKAFVFRNLLALVMDEADRILEQGFEDDLRSILKLLPKERQTMLFSATQTKKVEDLARLSINPKNSVFVDIPSDTNLATAAGLEQGYVTCPSDKRFLLLFTFLKKNKKKKIMVFFSSCNSVKYHAELLNYIDVPVMDIHGRQKQVKRTTTFFQFCKSDIGTMLCTDVAARGLDIPRVDWIIQFDPPDDPKEYIHRVGRTARGAKGSGRALLFLTPEETGFLRYLKAAKVTLNEYDFPTTKVANVQSQLYRLIESNYYLNRASRDAYRSYLLAYASHSHRDIFNVHELDLQAVGVAFGFTTPPRVDLAFGKEKRKKKVDG--KTARLAGSGHAFSADNPYGKRDASDRRQFS 588
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|570313957|gb|ETO61905.1| (hypothetical protein F444_20137 [Phytophthora parasitica P1976]) HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0 Identity = 345/502 (68.73%), Postives = 414/502 (82.47%), Query Frame = 0
Query: 241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDK-------RFGSTGHKFSANNPYGRREAGDSRQF 735
+F+++ F LP+S++T+ AL + F MT IQS +I PLLAG+D++ AAKTGSGKTL+FL+P VELL KV++ AR GTG I+ISPTREL++QIYGV+RD+C H THG++MGGANRRAEAERLVKGV+IL++TPGRLLDHLQNTK F+ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLS++ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N ++K+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC GILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARGA GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K IF+V LDLQ VA++FG VPP+V + + + G G+ K T D +F +GH FSA+NPYG+R AGD RQF
Sbjct: 102 YFSSEEFASLPLSESTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKY--HSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRAAGDKRQF 601
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|567947709|gb|ETK73483.1| (hypothetical protein L915_19586 [Phytophthora parasitica] >gi|567976389|gb|ETL26913.1| hypothetical protein L916_19477 [Phytophthora parasitica] >gi|570937743|gb|ETP03000.1| hypothetical protein F441_20003 [Phytophthora parasitica CJ01A1] >gi|570968032|gb|ETP31151.1| hypothetical protein F442_19952 [Phytophthora parasitica P10297]) HSP 1 Score: 733.791 bits (1893), Expect = 0.000e+0 Identity = 345/502 (68.73%), Postives = 413/502 (82.27%), Query Frame = 0
Query: 241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDK-------RFGSTGHKFSANNPYGRREAGDSRQF 735
+F+++ F LP+S+ T+ AL + F MT IQS +I PLLAG+D++ AAKTGSGKTL+FL+P VELL KV++ AR GTG I+ISPTREL++QIYGV+RD+C H THG++MGGANRRAEAERLVKGV+IL++TPGRLLDHLQNTK F+ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLS++ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N ++K+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC GILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARGA GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K IF+V LDLQ VA++FG VPP+V + + + G G+ K T D +F +GH FSA+NPYG+R AGD RQF
Sbjct: 102 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKY--HSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRAAGDKRQF 601
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|675210649|ref|XP_008914209.1| (hypothetical protein PPTG_17988 [Phytophthora parasitica INRA-310] >gi|566010258|gb|ETI33169.1| hypothetical protein F443_20123 [Phytophthora parasitica P1569] >gi|568005882|gb|ETL80160.1| hypothetical protein L917_19317 [Phytophthora parasitica] >gi|568035780|gb|ETM33408.1| hypothetical protein L914_19352 [Phytophthora parasitica] >gi|568085634|gb|ETN00538.1| hypothetical protein PPTG_17988 [Phytophthora parasitica INRA-310] >gi|970662347|gb|KUF99742.1| ATP-dependent RNA helicase HAS1 [Phytophthora nicotianae]) HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0 Identity = 345/502 (68.73%), Postives = 413/502 (82.27%), Query Frame = 0
Query: 241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDK-------RFGSTGHKFSANNPYGRREAGDSRQF 735
+F+++ F LP+S+ T+ AL + F MT IQS +I PLLAG+D++ AAKTGSGKTL+FL+P VELL KV++ AR GTG I+ISPTREL++QIYGV+RD+C H THG++MGGANRRAEAERLVKGV+IL++TPGRLLDHLQNTK F+ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLS++ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N ++K+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC GILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARGA GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K IF+V LDLQ VA++FG VPP+V + + + G G+ K T D +F +GH FSA+NPYG+R AGD RQF
Sbjct: 102 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKY--HSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRAAGDKRQF 601
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|1214711405|gb|OWZ22418.1| (ATP-dependent RNA helicase [Phytophthora megakarya]) HSP 1 Score: 731.865 bits (1888), Expect = 0.000e+0 Identity = 343/502 (68.33%), Postives = 414/502 (82.47%), Query Frame = 0
Query: 241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDK-------RFGSTGHKFSANNPYGRREAGDSRQF 735
+F+++ F LP+S+ T+ AL + F MT IQS +I PLLAG+D++ AAKTGSGKTL+FL+P VELL KV++ AR GTG I+ISPTREL++QIYGV+RD+C H THG++MGGANRRAEAERLVKGV+IL++TPGRLLDHLQNTK F+ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLS++ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N ++K+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC GILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARGA GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K++F+V LDLQ VA++FG VPP+V + + + G G+ K T D +F +GH FSA+NPYG+R +GD RQF
Sbjct: 86 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKY--HSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKNLFDVARLDLQGVAKSFGLQVPPKVTLPVKTNGKAGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRASGDKRQF 585
BLAST of EWM26104.1 vs. NCBI_GenBank
Match: gi|669149630|ref|XP_008610377.1| (hypothetical protein SDRG_06376 [Saprolegnia diclina VS20] >gi|530738029|gb|EQC36271.1| hypothetical protein SDRG_06376 [Saprolegnia diclina VS20]) HSP 1 Score: 719.924 bits (1857), Expect = 0.000e+0 Identity = 341/498 (68.47%), Postives = 414/498 (83.13%), Query Frame = 0
Query: 239 AVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHE-EAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQF 735
+V+F+++ FE LP+S+ T+ LK + FV +T IQS +I PLLAG D++ AAKTGSGKTL+FL+P +ELL KVK+ AR GTG I+ISPTREL++QIYGV++++ H THG++MGGANRRAEAERLVKGV+IL+ATPGRLLDHLQNTKGF+ NLQ+ VIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL ++S+QG PV+VG + E A ATV LEQGYVV PSDKRFLLLFTFLK+N +K+MVFFSSCN+VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC GILLCTDVAARGLDIPAVDWIIQYDPPDDP+EYIHRVGRTARGA G G+ALL L EE+GFLKYL+AAKVAL+EY+FP KKVANV+ QL KLVEK YYL+KSA++AYRSYLLAYASH K+IF+V LDL AVA++FG +VPP+V + + + G +G+ K ++ ++ +GH FSA NPYG+R D RQF
Sbjct: 22 SVYFSDETFESLPLSEPTQRVLKEMNFVKLTKIQSKSIRPLLAGSDLLGAAKTGSGKTLSFLIPSIELLYKVKFTARKGTGCIVISPTRELALQIYGVVKEITKY--HTQTHGIVMGGANRRAEAERLVKGVNILIATPGRLLDHLQNTKGFIFHNLQIFVIDEADRILSIGFEEEMRQIIKCIPKTRQTMLFSATQTKKVEDLIKVSIQGTPVYVGVDDVENAEATVQTLEQGYVVTPSDKRFLLLFTFLKKNLNKKVMVFFSSCNAVKFYGELLNYIDVPVLDIHGKQKQNKRTTTFFQFCSAKSGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGATGAGKALLMLLPEELGFLKYLKAAKVALSEYDFPTKKVANVENQLMKLVEKTYYLHKSAKEAYRSYLLAYASHGLKNIFDVGTLDLPAVAKSFGLTVPPKVTLPVKTNGKEGKRK---REDKYSKSGHAFSAENPYGKRAKDDKRQF 514 The following BLAST results are available for this feature:
BLAST of EWM26104.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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