EWM26083.1, cds4537 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|585108077|gb|EWM26083.1| (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 941.414 bits (2432), Expect = 0.000e+0 Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0
Query: 1 MPSVKTGGDHELSRRKRKSTLLTSLHAANLCCFGSAFFLVVISPTWCHLNYLANAFVPLVYSGKCQLHNFRAASSAGTMGPQLCARPRRAAQRVGAIAMRVKFDVKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLMLRAEELRWGAGGRSAYSKYASPGTKGSASSRSNTGERGERVGGEMRGRPPPRRRRGRAPGTGERGGGAPEAEEGNGSVRSPWVARKGGEEDQGFA 461
MPSVKTGGDHELSRRKRKSTLLTSLHAANLCCFGSAFFLVVISPTWCHLNYLANAFVPLVYSGKCQLHNFRAASSAGTMGPQLCARPRRAAQRVGAIAMRVKFDVKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLMLRAEELRWGAGGRSAYSKYASPGTKGSASSRSNTGERGERVGGEMRGRPPPRRRRGRAPGTGERGGGAPEAEEGNGSVRSPWVARKGGEEDQGFA
Sbjct: 1 MPSVKTGGDHELSRRKRKSTLLTSLHAANLCCFGSAFFLVVISPTWCHLNYLANAFVPLVYSGKCQLHNFRAASSAGTMGPQLCARPRRAAQRVGAIAMRVKFDVKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLMLRAEELRWGAGGRSAYSKYASPGTKGSASSRSNTGERGERVGGEMRGRPPPRRRRGRAPGTGERGGGAPEAEEGNGSVRSPWVARKGGEEDQGFA 461
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|553181798|ref|XP_005853628.1| (chaperone protein, partial [Nannochloropsis gaditana CCMP526] >gi|553196462|ref|XP_005856349.1| chaperone protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292703|gb|EKU20005.1| chaperone protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295432|gb|EKU22731.1| chaperone protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 419.853 bits (1078), Expect = 2.574e-144 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
Query: 1 MPSVKTGGDHELSRRKRKSTLLTSLHAANLCCFGSAFFLVVISPTWCHLNYLANAFVPLVYSGKCQLHNFRAASSAGTMGPQLCARPRRAAQRVGAIAMRVKFDVKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSS 201
MPSVKTGGDHELSRRKRKSTLLTSLHAANLCCFGSAFFLVVISPTWCHLNYLANAFVPLVYSGKCQLHNFRAASSAGTMGPQLCARPRRAAQRVGAIAMRVKFDVKKDYYARLDI+KSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSS
Sbjct: 9 MPSVKTGGDHELSRRKRKSTLLTSLHAANLCCFGSAFFLVVISPTWCHLNYLANAFVPLVYSGKCQLHNFRAASSAGTMGPQLCARPRRAAQRVGAIAMRVKFDVKKDYYARLDIDKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSS 209
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|553181801|ref|XP_005853629.1| (heat shock protein 40 like protein domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|553196474|ref|XP_005856353.1| heat shock protein 40 like protein domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292707|gb|EKU20009.1| heat shock protein 40 like protein domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295433|gb|EKU22732.1| heat shock protein 40 like protein domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 407.912 bits (1047), Expect = 1.173e-139 Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0
Query: 206 YDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLMLRAEELRWGAGGRSAYSKYASPGTKGSASSRSNTGERGERVGG 409
YDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGR FLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLMLRAEELRWGAGGRSAYSKYASPGTKGSASSRSNTGERGERVGG
Sbjct: 1 YDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRSFLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLMLRAEELRWGAGGRSAYSKYASPGTKGSASSRSNTGERGERVGG 204
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|298709079|emb|CBJ31027.1| (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 132.109 bits (331), Expect = 5.801e-31 Identity = 93/265 (35.09%), Postives = 144/265 (54.34%), Query Frame = 0
Query: 113 LDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTA----------------SSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLEDVV-SFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAA----RDLEGVDRQLEAVEKVAATQARVKDLEGHMK 356
L+I ++A ++IKRAYRR AL+THPDVN AP A E +V AY+VLSD + R Y+ R F + RR G ++ ++R W +Q T + I DSF IFRD VG + S GG G + + V FLE+ VDGFS ++ EFE+++ +LQ +++E+EN FL+ +L+ K ++ ID + A+ ++ ++A D++ +DRQ+ A+EK A +AR +L+GH+K
Sbjct: 69 LEIPETADQSEIKRAYRRKALKTHPDVNTAPTAKEDLAEVVNAYEVLSDEKKRASYNTRRK-----FANPFRRGGGGGAGAAGSGGGGGAAAWGSSTYNAAREEAARRWREQ------------NPTPDEIGDSFGDIFRDLVGGIASVGGGGGVLNDVVDFLENQVDGFSSDTSLEFEDLMASRNLQEMKEELENTRFLLEQLKMKSRKLGIDKLAAEKEVVAMKAGGGSRRFTDIDELDRQMSAIEKAAGIKARYDELQGHVK 316
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|544210161|ref|XP_005535482.1| (similar to heat shock protein dnaJ [Cyanidioschyzon merolae strain 10D] >gi|449015794|dbj|BAM79196.1| similar to heat shock protein dnaJ [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 120.939 bits (302), Expect = 6.839e-27 Identity = 85/231 (36.80%), Postives = 114/231 (49.35%), Query Frame = 0
Query: 83 LCARPRRAA---------QR--VGAIAMR--VKFDVKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGS-----NGGRGFLEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFL 295
+ +RP RAA QR VG ++ R V+FD +DYYA L +E A L IKRAYRRLALQ HPD NK P A E F ++ AY+VLS+ +ARK YDL R GSG G +GG G SSS+ EE E ++DSF +IF D + +G G D V FLES + + + +L D ++Q E+++ F+
Sbjct: 31 IVSRPSRAAWSRKSLLVQQRSGVGTLSARSSVQFDPTEDYYAVLGVESDADLATIKRAYRRLALQNHPDANKDPQAREKFIRILRAYEVLSNEDARKQYDLQRRSPGSGPFWG------IGGPGAQRRRSSST------------------EEYPEDLNDSFGAIFSDLMEQLGRLWQEGTKENGIFADFVEFLESQGANWGSLRNEDLNSVLTSSDEDVLQAELDDARFV 237
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|546319940|ref|XP_005717156.1| (unnamed protein product [Chondrus crispus] >gi|507113727|emb|CDF37337.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 110.923 bits (276), Expect = 5.626e-23 Identity = 87/274 (31.75%), Postives = 131/274 (47.81%), Query Frame = 0
Query: 105 VKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRD-FVGNVGSNGGR---GFLEDVVSFLESNVDGF--------SEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAARDLEGVDRQLEAVEKVAATQARVKDLEGHMKRADKRQRRLM 366
+ D+Y L I+++A+ + IKRAYRR AL+ HPDV+KAPDA E F +V EAY VLSD+ R YD S S + G + ++ W +Q P + ++DSF SIF D F G G+ G G ++D V FLE+ VDGF S++ D +ILK D+ ++Q EI++ +F++ +L +Q + + Q + + A R +D K R DL+ KR R R+ +
Sbjct: 110 LSSDFYEILGIDRNANNSTIKRAYRRAALKNHPDVSKAPDAKERFMRVQEAYSVLSDSSTRASYDRRSQSGYSSSSSSAWPGGSAGPNFDP---TEFAKKWREQ-NPM-----------PKDLNDSFGSIFSDLFSGVAGAASGATRPGIMDDFVDFLENQVDGFGVDSSGYASDDEDDGLSDILKSSDVDVLQAEIDDAHFVLQQLETRQSKLDEEAASLQKRADEWRVRANRAEGSMDYTTRDTAK-----ERASDLKAEAKRFSSRSRKTL 363
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|503027638|ref|WP_013262614.1| (J domain-containing protein [gamma proteobacterium HdN1] >gi|301797913|emb|CBL46135.1| Curved DNA-binding protein [gamma proteobacterium HdN1]) HSP 1 Score: 90.1225 bits (222), Expect = 3.158e-16 Identity = 50/93 (53.76%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 105 VKKDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYD--------------LARGMQGSGFGSGG 183
V KDYY+ L + + AS DIK+AYRRLA Q HPD NKAPDA E FK V EAY+VLSDAE R YD G +GSGFG+ G
Sbjct: 2 VSKDYYSTLGVARDASAADIKKAYRRLARQYHPDKNKAPDAEEHFKAVGEAYEVLSDAEKRAAYDQFGSDGFGGGGAHGWQSGARGSGFGADG 94
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|391326321|ref|XP_003737666.1| (PREDICTED: dnaJ homolog subfamily B member 4 isoform X1 [Galendromus occidentalis]) HSP 1 Score: 89.3521 bits (220), Expect = 6.497e-16 Identity = 60/147 (40.82%), Postives = 79/147 (53.74%), Query Frame = 0
Query: 107 KDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLED 253
KD YA L++ KSASL +IK++YRRLAL+ HPD NK+PDAAE F++VC AY+VLS+ E R YD FG G R VGG G S +S+R + P + D+ F + F N+G GG +D
Sbjct: 7 KDLYAVLEVPKSASLEEIKKSYRRLALKYHPDKNKSPDAAEKFREVCSAYEVLSNKEKRDTYD--------RFGEDGLRQGGVGGNGAGGRSGTSTRFY-------TSTDPMSTFTQFFGTDNPFENFF-----NLGRGGGFSTFDD 133
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|391326319|ref|XP_003737665.1| (PREDICTED: dnaJ homolog subfamily B member 4 isoform X2 [Galendromus occidentalis]) HSP 1 Score: 88.9669 bits (219), Expect = 8.000e-16 Identity = 60/147 (40.82%), Postives = 79/147 (53.74%), Query Frame = 0
Query: 107 KDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYDLARGMQGSGFGSGGRRWTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGFLED 253
KD YA L++ KSASL +IK++YRRLAL+ HPD NK+PDAAE F++VC AY+VLS+ E R YD FG G R VGG G S +S+R + P + D+ F + F N+G GG +D
Sbjct: 3 KDLYAVLEVPKSASLEEIKKSYRRLALKYHPDKNKSPDAAEKFREVCSAYEVLSNKEKRDTYD--------RFGEDGLRQGGVGGNGAGGRSGTSTRFY-------TSTDPMSTFTQFFGTDNPFENFF-----NLGRGGGFSTFDD 129
BLAST of EWM26083.1 vs. NCBI_GenBank
Match: gi|1125134589|gb|OLA94733.1| (hypothetical protein BHW64_02240 [Candidatus Melainabacteria bacterium LEY3_CP_29_8]) HSP 1 Score: 87.4261 bits (215), Expect = 3.030e-15 Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 0
Query: 107 KDYYARLDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYD-LARGMQGSGFGSGGRR--WTNVGGRGTASSSSSSSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFV 239
KDYY L ++K A+ IK AYR+LA + HPDV+K A++ FK++ EAY+VLSD E R+ YD L Q G+GS + W +S S++ ++G + +G FGG D F +IF D
Sbjct: 4 KDYYKILGVDKKATQTQIKSAYRKLAKKYHPDVDKTKAASDKFKEINEAYEVLSDKEKRERYDNLGSNWQNMGYGSNANQGGWEQFYQNAGSSRSNTYTQGDFSSFGQFGG------------FSDFFKTIFGDMT 127 The following BLAST results are available for this feature:
BLAST of EWM26083.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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