EWM26108.1, cds4530 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|585108102|gb|EWM26108.1| (methionine adenosyltransferase beta [Nannochloropsis gaditana]) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0 Query: 1 MPAAINPPVVLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARGLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVLQGILGETSDS 352 MPAAINPPVVLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARGLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVLQGILGETSDS Sbjct: 1 MPAAINPPVVLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARGLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVLQGILGETSDS 352
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|752770810|ref|WP_041417921.1| (NAD(P)-dependent oxidoreductase [Shewanella woodyi]) HSP 1 Score: 192.971 bits (489), Expect = 1.615e-55 Identity = 116/334 (34.73%), Postives = 178/334 (53.29%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRAR-GLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVL 342 V++ G++GLLGRAV L ++ H ++ TG SRA G+ D+TDE + EF+ P V+++C AERRPD+ E+ A LN+ LA+ + + G +L++ISTDYVFDGT+P Y D P+P+N YGE KL E+ L S A+LR+P+LYG + ES+V +L +L S+ + VD+WA R T T+D+A + M+ L G +L G +H+S+K+ +KY + +++ E+ ++HL P +SP + A RP DC L L E LG + A ++G++E L Sbjct: 4 VMITGSTGLLGRAVVKQLKQTDEHLLI--ATGFSRAETGIYKLDLTDEEAISEFIGVHQPDVIIHCAAERRPDISEQSPEAALALNLGATGALAKAAKQQGTWLIYISTDYVFDGTEPSYSEADKPNPVNFYGESKLQGEQALLATASD---FAVLRLPILYGEVEKIEESAVLVLLNQLL---DSTPQNVDNWAVRSPTSTQDIALAIEQMIGLHLKGE-DLNGIYHFSAKQ----------------------------------TMSKYQMLLVLAELFELNSEHLTPISSPMDTAKRPHDCTLSCQRLTE-LG--IASQIAFKEGVKESL 291
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|169810300|gb|ACA84884.1| (dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908]) HSP 1 Score: 192.971 bits (489), Expect = 2.806e-55 Identity = 116/334 (34.73%), Postives = 178/334 (53.29%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRAR-GLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVL 342 V++ G++GLLGRAV L ++ H ++ TG SRA G+ D+TDE + EF+ P V+++C AERRPD+ E+ A LN+ LA+ + + G +L++ISTDYVFDGT+P Y D P+P+N YGE KL E+ L S A+LR+P+LYG + ES+V +L +L S+ + VD+WA R T T+D+A + M+ L G +L G +H+S+K+ +KY + +++ E+ ++HL P +SP + A RP DC L L E LG + A ++G++E L Sbjct: 25 VMITGSTGLLGRAVVKQLKQTDEHLLI--ATGFSRAETGIYKLDLTDEEAISEFIGVHQPDVIIHCAAERRPDISEQSPEAALALNLGATGALAKAAKQQGTWLIYISTDYVFDGTEPSYSEADKPNPVNFYGESKLQGEQALLATASD---FAVLRLPILYGEVEKIEESAVLVLLNQLL---DSTPQNVDNWAVRSPTSTQDIALAIEQMIGLHLKGE-DLNGIYHFSAKQ----------------------------------TMSKYQMLLVLAELFELNSEHLTPISSPMDTAKRPHDCTLSCQRLTE-LG--IASQIAFKEGVKESL 312
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|1208947057|ref|WP_088209999.1| (NAD(P)-dependent oxidoreductase [Shewanella sp. Shew256]) HSP 1 Score: 191.045 bits (484), Expect = 8.959e-55 Identity = 122/317 (38.49%), Postives = 169/317 (53.31%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRAR-GLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALG 325 ++V GA+GLLGRAV L ++ H V+ TG SRA G+ D+T + F+A + P V+V+C AERRPDV E+ A VLN+ + LAE + +LL+ISTDYVFDGT PPY P+P+N YGE KL E + DSG A+LR+P+LYG L+ES+V +L +L S ++VD WA R T T D+A + ++ R GA + G +H+S+K+ TKY + + +GE+LG T HL PE +P + A RPQ+C L L ALG Sbjct: 4 IMVTGATGLLGRAVVKQL-TAVGHRVI--ATGFSRAEAGIYRLDLTQAAEVEAFIAREQPEVIVHCAAERRPDVSERSPEHALVLNLSASQTLAEVAKTHQAWLLYISTDYVFDGTTPPYAEDAAPNPVNFYGESKLQGETCVLNADSG---FAVLRLPILYGEVTQLSESAVLVLINQLL---DSRPQRVDHWAIRAPTSTADIANAIAKLIQRQSDGA-YVSGIYHFSAKQ----------------------------------TMTKYQMLLSLGELLGIDTAHLLPEQTPMDSAKRPQNCTLSCGRL-AALG 275
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|1040988096|ref|WP_065187321.1| (NAD(P)-dependent oxidoreductase [Shewanella sp. Alg231_23]) HSP 1 Score: 190.274 bits (482), Expect = 1.983e-54 Identity = 115/334 (34.43%), Postives = 176/334 (52.69%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRAR-GLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVL 342 V++ G++GLLGRAV L ++ H ++ TG SRA G+ D+TDE + EF+ P V+++C AERRPD+ E+ A LN+ LA+ + + G +L++ISTDYVFDGT+P Y D P+P+N YGE KL E+ L S A+LR+P+LYG + ES+V +L + S+ + VD WA R T T+D+A + M+ L G +L G +H+S+K+ +KY + +++ E+ ++HL P +SP + A RP DC L L E LG + A ++G++E L Sbjct: 4 VMITGSTGLLGRAVVKQLKQTDEHLLI--ATGFSRAETGIYKLDLTDEEAISEFIGVHQPDVIIHCAAERRPDISEQSPEAALALNLGATGALAKAAKQQGTWLIYISTDYVFDGTEPSYSEADKPNPVNFYGESKLQGEQALLATASD---FAVLRLPILYGEVEKIEESAVLVLLNQLF---DSTPQNVDHWAVRSPTSTQDIALAIEQMIGLHLKGE-DLSGIYHFSAKQ----------------------------------TMSKYQMLLVLAELFELNSEHLTPISSPMDTAKRPHDCTLSCQRLTE-LG--IASQIAFKEGVKESL 291
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|835515420|ref|WP_047536671.1| (NAD(P)-dependent oxidoreductase [Shewanella sp. ZOR0012]) HSP 1 Score: 189.119 bits (479), Expect = 4.824e-54 Identity = 116/307 (37.79%), Postives = 163/307 (53.09%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARGLI-PCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCEL 315 ++V GA+GLLGRAV L + G V TG SRA I D+T T+ F+A + P V+V+C AERRPDV E +A LN+ + LA+ + + G +LL+ISTDYVFDGT PPY P+P+N YGE KL E + DSG A+LR+P+LYG L+ES+V +L +L S ++VD WA R T T D+A + ++ R L A ++ G +H+S+ + TKY + + +GE+L T HL PE +P + A RPQ+C L Sbjct: 4 IMVTGATGLLGRAVVKQLTAA---GHKVIATGFSRAEANIHKLDLTQAITVEAFIAHERPEVIVHCAAERRPDVSEHSPEQALALNLSASQTLAKAAKQHGAWLLYISTDYVFDGTTPPYAEDAAPNPVNFYGESKLQGETCVLNTDSG---FAVLRLPILYGEVTQLSESAVLVLINQLL---DSRPQRVDAWAIRSPTSTADIAGAIAKLIKRQL-HAADVSGIYHFSAPQ----------------------------------TMTKYQMLLGLGELLAIDTAHLTPEMTPMDSAKRPQNCTL 266
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|739564578|ref|WP_037422702.1| (NAD(P)-dependent oxidoreductase [Shewanella xiamenensis] >gi|659913446|gb|KEK27003.1| NAD dependent epimerase/dehydratase [Shewanella xiamenensis]) HSP 1 Score: 188.348 bits (477), Expect = 9.272e-54 Identity = 119/317 (37.54%), Postives = 167/317 (52.68%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARGLI-PCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALG 325 ++V GA+GLLGRAV L + G V TG SRA I D+T + F+A + P V+V+C AERRPDV E+ +A LN+ + LA+ + + G +LL+ISTDYVFDGT PPY P+P+N YGE KL E + DSG A+LR+P+LYG L+ES+V +L +L S ++VD WA R T T D+A + ++ R L A ++ G +H+S+ + TKY + + +GE+L T HL PE +P + A RPQ+C L L ALG Sbjct: 4 IMVTGATGLLGRAVVKQLTAA---GHKVIATGFSRAEANIHKLDLTQTVAVEAFIAHERPEVIVHCAAERRPDVSERSPEQALTLNLSASQTLAKAAKQHGAWLLYISTDYVFDGTTPPYAEDAAPNPVNFYGESKLQGETCVLNTDSG---FAVLRLPILYGEVTQLSESAVLVLINQLL---DSRPQRVDAWAIRSPTSTADIAGAIAKLIKRQL-HAADVSGIYHFSAPQ----------------------------------TMTKYQMLLGLGELLAIDTAHLTPEMTPMDSAKRPQNCTLSCGRL-AALG 275
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|762099171|ref|XP_011432001.1| (PREDICTED: methionine adenosyltransferase 2 subunit beta [Crassostrea gigas] >gi|405959726|gb|EKC25730.1| Methionine adenosyltransferase 2 subunit beta [Crassostrea gigas]) HSP 1 Score: 187.578 bits (475), Expect = 1.373e-53 Identity = 111/335 (33.13%), Postives = 168/335 (50.15%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRAR-GLIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVLQ 343 VL+ GASGLLGRA+ L+ + G SR + L D+TDE ++E ++ P V+++ AERRPDVVE LN++ E + + + +G ++L+ISTDYVFDGT PPY P+PLN YG+ KL EK+ G S ++LRVP+LYG L+ES+VT+L ++L S D+ +Y TH D+A + + D+ L ++ G FH++S E+ TKY +SV + TK++ P+ +P +GAPRP D L ++ + R DG++ VL+ Sbjct: 5 VLITGASGLLGRAIYREFLKD--NSWETLGLAFSRVKENLKKVDITDENQVKEVISTFKPSVIIHSAAERRPDVVENNPTGTQQLNIQATEHICQAAKSIGAWVLYISTDYVFDGTSPPYNEDAKPNPLNKYGQSKLEGEKITLGASSEN---SVLRVPILYGEIEYLSESAVTILFENILAGKESI---ASDYEIKYPTHCGDIAYTIRQLADKRLQIPEKVCGVFHWTSNEK----------------------------------MTKYLMSVAMASAFSLDTKNIIPDKNPSKGAPRPYDTHLSCEKMEALVS---GRRTLFSDGIKSVLE 294
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|1183471797|gb|ORY95686.1| (hypothetical protein BCR43DRAFT_515791 [Syncephalastrum racemosum]) HSP 1 Score: 187.578 bits (475), Expect = 1.736e-53 Identity = 118/311 (37.94%), Postives = 164/311 (52.73%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARG---LIPCDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEPEASPP--EGAPRPQDCEL 315 V+V GASGLLGRAV H ++E+ G V GT SRA L+ D+TD +T++ F+ + P V+V+C AERRPDV E + LN + LAE + + G L++ISTDYVFDGT PPY+ D PHPLN YGE KL E+ + +LRVP+LYGP+ ES+V +L V +S Q +DD+A RY TH +DVARV+ + + G +RG FH+S G +TKY++ ++G+++ HL P+ P A RP+D L Sbjct: 3 VIVTGASGLLGRAVTHAMVEA---GHQVVGTAFSRADKHAKLVKLDLTDASTVQRFIEEEKPDVLVHCAAERRPDVAENDHEATLKLNASVPSHLAELAKQHGMLLIYISTDYVFDGTNPPYEVSDTPHPLNFYGESKLRGEEAVLAY---PEQSLVLRVPILYGPTEYDGESAVNVLLGAVKNQGKSVQ--MDDFAQRYPTHVQDVARVLKDLAELG-KKDGRVRGIFHFS----------------------------------GHEVFTKYTMCGILGKIMNMPIDHLTPQRDVPASAAASRPKDAHL 270
BLAST of EWM26108.1 vs. NCBI_GenBank
Match: gi|591354356|ref|XP_007071534.1| (PREDICTED: methionine adenosyltransferase 2 subunit beta [Chelonia mydas]) HSP 1 Score: 187.578 bits (475), Expect = 2.180e-53 Identity = 126/339 (37.17%), Postives = 176/339 (51.92%), Query Frame = 0 Query: 10 VLVLGASGLLGRAVQHTLLESLPHGVVVAGTGHSRARGLIP-CDVTDETTLREFLAAQAPRVVVNCVAERRPDVVEKEDAKAHVLNVRLVEILAEESARLGFYLLHISTDYVFDGTKPPYKPGDDPHPLNAYGEQKLASEKVLRGKDSGERACAILRVPVLYGPSADLAESSVTLLARDVLVPPRSSQKKVDDWAARYATHTEDVARVVTAMVDRALTGAGELRGTFHYSSKERSQDLSRGAGGEERSQDLSRGVGGEQCPGQGGGRAYTKYSISVLIGEVLGRATKHLEP-EASPPEGAPRPQDCELDISALQEALGEKVTRSRALRDGLREVLQGIL 346 VL+ GA+GLLGRAV E+ H V G G+SRAR ++ D + + + P V+V+C AERRPDVVE + LNV LA+E+A +G +L++ISTDYVFDGT PPYK D P+PLN YG+ KL EK + + G A+LR+PVLYG L ES+VT++ V +S+ +D W R+ T+ +DVA V + ++ + ++GTFH+S G EQ TKY ++ I + + HL P SP GA RP++ +LD S L E LG + + R G+RE L L Sbjct: 13 VLITGATGLLGRAVYKEFNENNWHAV---GCGYSRARPKFERVNLLDSIGVHDIIQDFQPHVIVHCAAERRPDVVESQADVVSQLNVTASGNLAKEAAGVGAFLIYISTDYVFDGTNPPYKESDAPNPLNLYGKTKLEGEKTVLENNEG---AAVLRIPVLYGEVEKLEESAVTVMFDKVQFSNKSAN--MDHWQQRFPTNVKDVASVCRQLSEKRMLDPS-IKGTFHWS-------------------------GNEQ---------MTKYEMACTIADAFNLPSSHLRPITDSPVVGALRPRNAQLDCSKL-EMLG--IGQRTPFRVGIRESLWPFL 305 The following BLAST results are available for this feature:
BLAST of EWM26108.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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