EWM26155.1, cds4525 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|585108149|gb|EWM26155.1| (Hrf1 [Nannochloropsis gaditana]) HSP 1 Score: 796.964 bits (2057), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
Query: 1 MQQDGGQHWHQFPPQHANQDYSTQQQYGGHAQVPHAAHQQLQPGVNVFNPGAYKQQQQAQQQQQEPQQQQEQFRRAPYGGGPPSSFGQGHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTPMAGVEELFDNVEPVTTGLSGRKNA 387
MQQDGGQHWHQFPPQHANQDYSTQQQYGGHAQVPHAAHQQLQPGVNVFNPGAYKQQQQAQQQQQEPQQQQEQFRRAPYGGGPPSSFGQGHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTPMAGVEELFDNVEPVTTGLSGRKNA
Sbjct: 1 MQQDGGQHWHQFPPQHANQDYSTQQQYGGHAQVPHAAHQQLQPGVNVFNPGAYKQQQQAQQQQQEPQQQQEQFRRAPYGGGPPSSFGQGHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTPMAGVEELFDNVEPVTTGLSGRKNA 387
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|567954515|gb|ETK80148.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567983170|gb|ETL33569.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570944608|gb|ETP09865.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 179.489 bits (454), Expect = 1.048e-48 Identity = 93/240 (38.75%), Postives = 135/240 (56.25%), Query Frame = 0
Query: 93 NMDFGLNAITAAANSQAFS-MGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRD 331
++ F LN AA S + + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P +
Sbjct: 181 DLKFMLNFAFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPEN 402
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|567954514|gb|ETK80147.1| (hypothetical protein L915_14091 [Phytophthora parasitica] >gi|567983169|gb|ETL33568.1| hypothetical protein L916_13989 [Phytophthora parasitica] >gi|570944607|gb|ETP09864.1| hypothetical protein F441_14321 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 179.874 bits (455), Expect = 1.086e-48 Identity = 97/272 (35.66%), Postives = 145/272 (53.31%), Query Frame = 0
Query: 93 NMDFGLNAITAAANSQAFS-MGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTP 363
++ F LN AA S + + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P + + ++ G + +Q +S P
Sbjct: 181 DLKFMLNFAFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENR----LFRNYLLFGVSCLQLILVCWISYTTAP 430
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|570976099|gb|ETP37970.1| (hypothetical protein F442_14286 [Phytophthora parasitica P10297]) HSP 1 Score: 179.489 bits (454), Expect = 1.219e-48 Identity = 97/272 (35.66%), Postives = 145/272 (53.31%), Query Frame = 0
Query: 93 NMDFGLNAITAAANSQAFS-MGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTP 363
++ F LN AA S + + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P + + ++ G + +Q +S P
Sbjct: 181 DLKFMLNFAFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENR----LFRNYLLFGVSCLQLILVCWISYTTAP 430
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|570976100|gb|ETP37971.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 179.104 bits (453), Expect = 1.253e-48 Identity = 93/240 (38.75%), Postives = 135/240 (56.25%), Query Frame = 0
Query: 93 NMDFGLNAITAAANSQAFS-MGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRD 331
++ F LN AA S + + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P +
Sbjct: 181 DLKFMLNFAFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPEN 402
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|695373958|ref|XP_009515174.1| (hypothetical protein PHYSODRAFT_343683 [Phytophthora sojae] >gi|348688085|gb|EGZ27899.1| hypothetical protein PHYSODRAFT_343683 [Phytophthora sojae]) HSP 1 Score: 177.563 bits (449), Expect = 2.925e-48 Identity = 116/349 (33.24%), Postives = 168/349 (48.14%), Query Frame = 0
Query: 27 YGGHAQVPHAAHQQLQPGVNVFNPGAYKQQQQAQQ-----QQQEPQQQ-------QEQFRRAPYGGGPPSSFGQGHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTP 363
Y G A P + QPG+N P QQQ Q Q + P Q ++ P P Q QP DF I +++ + + Q++L Y P VW LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P + + ++ G + +Q +S P
Sbjct: 72 YSGQA-TPAFSQDFHQPGMNAMPPA----QQQFQSAPAGFQHRHPTHGNNFGGYGQNAPQQTPPNSNPRPHMQQAQQP--DF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGN---------------GEQDESKPM---QYAPPTRDCNAPDLYIPLMGFLTYILIVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINTVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPTPENR----LFRNYLLFGVSCLQLILVCWISYTTAP 387
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|675202411|ref|XP_008910090.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568089856|gb|ETN04696.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 177.948 bits (450), Expect = 3.548e-48 Identity = 93/240 (38.75%), Postives = 134/240 (55.83%), Query Frame = 0
Query: 93 NMDFGLNAITAAANSQAFS-MGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRD 331
++ F LN AA S + + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y ++YTG+A++YF+L +V P +
Sbjct: 181 DLKFMLNFAFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPEN 402
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|675202409|ref|XP_008910089.1| (hypothetical protein PPTG_14505 [Phytophthora parasitica INRA-310] >gi|568089855|gb|ETN04695.1| hypothetical protein PPTG_14505 [Phytophthora parasitica INRA-310]) HSP 1 Score: 177.948 bits (450), Expect = 4.765e-48 Identity = 97/272 (35.66%), Postives = 144/272 (52.94%), Query Frame = 0
Query: 93 NMDFGLNAITAAANSQAFS-MGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTP 363
++ F LN AA S + + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y ++YTG+A++YF+L +V P + + ++ G + +Q +S P
Sbjct: 181 DLKFMLNFAFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENR----LFRNYLLFGVSCLQLILVCWISYTTAP 430
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|570976101|gb|ETP37972.1| (hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 177.178 bits (448), Expect = 6.857e-48 Identity = 109/332 (32.83%), Postives = 163/332 (49.10%), Query Frame = 0
Query: 42 QPGVNVFNPGAYKQQQQAQQQQQEPQQQQEQFRRAPYGG--------GPPSSFGQGH--QPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTP 363
QPG+N P QQQ + Q R +GG PP+S + H P + I +++ + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P + + ++ G + +Q +S P
Sbjct: 108 QPGMNAVPPA---------QQQFQSTPAGFQHRHPAHGGYAQNVPQQTPPNSNPRPHMQHPQQAQQADFINQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENR----LFRNYLLFGVSCLQLILVCWISYTTAP 408
BLAST of EWM26155.1 vs. NCBI_GenBank
Match: gi|566017139|gb|ETI40050.1| (hypothetical protein F443_14443 [Phytophthora parasitica P1569] >gi|567954516|gb|ETK80149.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567983171|gb|ETL33570.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568042715|gb|ETM40035.1| hypothetical protein L914_13899 [Phytophthora parasitica] >gi|570320837|gb|ETO68785.1| hypothetical protein F444_14441 [Phytophthora parasitica P1976] >gi|570944609|gb|ETP09866.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 177.178 bits (448), Expect = 7.227e-48 Identity = 109/332 (32.83%), Postives = 163/332 (49.10%), Query Frame = 0
Query: 42 QPGVNVFNPGAYKQQQQAQQQQQEPQQQQEQFRRAPYGG--------GPPSSFGQGH--QPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFSCVCVSEVGTP 363
QPG+N P QQQ + Q R +GG PP+S + H P + I +++ + + Q++L Y P +W LKYYF VN+ YVK +L L+ P+R ++WRR G D + M QY P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + + LDL++ +GYKY+ L N V+ LG Y +++YTG+A++YF+L +V P + + ++ G + +Q +S P
Sbjct: 108 QPGMNAVPPA---------QQQFQSTPAGFQHRHPAHGGYAQNVPQQTPPNSNPRPHMQHPQQAQQADFINQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRI---------------GNGEQDESKPM---QYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENR----LFRNYLLFGVSCLQLILVCWISYTTAP 408 The following BLAST results are available for this feature:
BLAST of EWM26155.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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