EWM26162.1, cds4511 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|585108157|gb|EWM26162.1| (ubiquitin conjugating enzyme family protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 568.926 bits (1465), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 LPPPPPPLALVCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLGEGGREGGKEGGKECWAAISGQITRMGWFQQAVGKKRYKAMMKALVESMDALVAGLEGEGGEGGGGGGATEAVCRQGPLGCGTEAQGRWRPRRRGGKGEASGGAGTGWKADGDRRQEGEGKKESRSGEGERSAGEEGMGADGWGCGRSEAAFSHGRDRERVRREPWA 289 LPPPPPPLALVCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLGEGGREGGKEGGKECWAAISGQITRMGWFQQAVGKKRYKAMMKALVESMDALVAGLEGEGGEGGGGGGATEAVCRQGPLGCGTEAQGRWRPRRRGGKGEASGGAGTGWKADGDRRQEGEGKKESRSGEGERSAGEEGMGADGWGCGRSEAAFSHGRDRERVRREPWA Sbjct: 1 LPPPPPPLALVCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLGEGGREGGKEGGKECWAAISGQITRMGWFQQAVGKKRYKAMMKALVESMDALVAGLEGEGGEGGGGGGATEAVCRQGPLGCGTEAQGRWRPRRRGGKGEASGGAGTGWKADGDRRQEGEGKKESRSGEGERSAGEEGMGADGWGCGRSEAAFSHGRDRERVRREPWA 289
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|1213702124|gb|OWY41352.1| (ubiquitin-conjugating enzyme/RWD-like protein [Alternaria alternata]) HSP 1 Score: 90.1225 bits (222), Expect = 1.473e-16 Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0 Query: 11 VCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEA----SSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLG 123 VCLSLLGTWSGEPW + S L Q+ ISI A I EP NEPG EA S + A+YN +R T+RTA++ L +PP L ++ VV HFRE AI + +W + ++ G Sbjct: 589 VCLSLLGTWSGEPWSASESTLLQVLISIQAMILCEEPWYNEPGREAGYTRSPNSPSAMYNDKIREHTVRTAILAWLDKPPPL----WKDVVDHHFREH-GNAILKTVEEWTKNKMSG 700
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|1070541058|ref|XP_018391918.1| (hypothetical protein CC77DRAFT_53407 [Alternaria alternata] >gi|1027166130|gb|OAG26497.1| hypothetical protein CC77DRAFT_53407 [Alternaria alternata]) HSP 1 Score: 87.4261 bits (215), Expect = 1.507e-15 Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 11 VCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEA----SSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLG 123 VCLSLLGTWSGEPW + S L Q+ ISI A I EP NEPG EA S + A+YN + T+RTA++ L +PP L ++ VV HFRE AI + +W + ++ G Sbjct: 596 VCLSLLGTWSGEPWSASESTLLQVLISIQAMILCEEPWYNEPGREAGYTRSPNSPSAMYNDKICEHTVRTAILAWLDKPPPL----WKDVVDHHFREH-GNAILKTVEEWTKNKMSG 707
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|1133456362|ref|XP_003385099.2| (PREDICTED: uncharacterized protein LOC100636993 [Amphimedon queenslandica]) HSP 1 Score: 87.0409 bits (214), Expect = 1.621e-15 Identity = 49/100 (49.00%), Postives = 59/100 (59.00%), Query Frame = 0 Query: 11 VCLSLLGTWSG----EPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEA--SSPA---TVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHF 101 VCLSLLGTW G E W+P SNL Q+FISI I EP+ NEPG EA +P + YNAY+++ T+R AM+ L PPA FE VK HF Sbjct: 1072 VCLSLLGTWHGGDSSEKWNPLQSNLLQVFISIQGLILIPEPIYNEPGYEAMQGTPQGKIRSSHYNAYIQVNTIRYAMLEQLRHPPA----GFEDTVKIHF 1167
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|971513339|dbj|GAQ84852.1| (ubiquitin-conjugating enzyme E2-like protein [Klebsormidium nitens]) HSP 1 Score: 86.6557 bits (213), Expect = 2.764e-15 Identity = 43/93 (46.24%), Postives = 54/93 (58.06%), Query Frame = 0 Query: 11 VCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEA-SSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFR 102 VCLSLLGTWSG W P S L Q+ IS+ + +F EP NEPG EA S A YN +RL +R A++ L PP F+ V +QHF+ Sbjct: 1454 VCLSLLGTWSGPSWRPGKSTLLQVLISLQSLVFVAEPYYNEPGYEARESSAASEAYNQDVRLNAMRYAILAPLKS----PPRAFQDVTQQHFK 1542
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|1020698751|gb|KZM19589.1| (acid-amino acid ligase [Ascochyta rabiei]) HSP 1 Score: 85.5001 bits (210), Expect = 6.147e-15 Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 0 Query: 1 LPPPPPPLALVCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEAS-----SPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGER 119 + P P VCLSLLGTWSGEPW P S L Q+ +S+ A +F +P NEPG E S + + YN LR T+R AM+ L +PP + +E VV QHFR A +I +++W ++ Sbjct: 626 INPNLYPDGKVCLSLLGTWSGEPWKPRESTLLQVLVSLQAMVFCEQPWYNEPGRERSHGVGYNNSASEAYNRKLRELTVRLAMLNWLEKPPQI----WEDVVGQHFRSN-ADSILRTVIEWSKK 744
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|684386321|ref|XP_009168432.1| (hypothetical protein T265_13718 [Opisthorchis viverrini] >gi|663051876|gb|KER27859.1| hypothetical protein T265_13718 [Opisthorchis viverrini]) HSP 1 Score: 85.5001 bits (210), Expect = 6.445e-15 Identity = 58/149 (38.93%), Postives = 74/149 (49.66%), Query Frame = 0 Query: 11 VCLSLLGTWSGEP---WDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVAL-----YNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLGEGGREGGKEGGK---ECWAAISGQITRM 148 VCLS+L TW G P WDP SNL Q+ +SI + IF +EP NEPG E + + YN +R TLR AM+ L PPA FE VV HF+ AI L +W +G KE K +C AA+ Q +R+ Sbjct: 5221 VCLSILNTWQGRPEERWDPKTSNLLQVLVSIQSLIFVSEPYFNEPGYECNYGTPLGQRESQRYNLNIRAATLRWAMLDQLCNPPA----GFEEVVYNHFKLK-REAILVQLERWVAE--CTQGTSSTSKEHQKRMADCLAALKQQFSRL 5362
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|1028903722|gb|OAL05971.1| (hypothetical protein IQ06DRAFT_332333 [Stagonospora sp. SRC1lsM3a]) HSP 1 Score: 84.7297 bits (208), Expect = 1.051e-14 Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 0 Query: 11 VCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEA-----SSPATVALYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREV 121 VCLSLLGTWSGEPW P S L Q+++SI A I EP NEPG EA S + A YN +R T+RTAM+ L + P+L ++ V++QHF A A I ++W + ++ Sbjct: 612 VCLSLLGTWSGEPWVPGVSTLLQVYLSIQAMILCEEPWYNEPGREAGYQNKSGDSPSARYNQSIREHTVRTAMLEWLDKTPSL----WKDVLEQHF-TANADKILHTAVKWSKSKI 722
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|358339921|dbj|GAA47887.1| (baculoviral IAP repeat-containing protein 6 [Clonorchis sinensis]) HSP 1 Score: 84.3445 bits (207), Expect = 1.727e-14 Identity = 58/151 (38.41%), Postives = 75/151 (49.67%), Query Frame = 0 Query: 11 VCLSLLGTWSGEP---WDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVA-----LYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREV--LGEGGREGGKEGGK---ECWAAISGQITRM 148 VCLS+L TW G P WDP SNL Q+ +SI + IF +EP NEPG E + + YN +R TLR AM+ L PPA FE VV HF+ R ++ ER V +G KE K +C AA+ Q +R+ Sbjct: 3805 VCLSILNTWQGRPEERWDPKTSNLLQVLVSIQSLIFVSEPYFNEPGYECNYGTPLGQRESQRYNLNIRAATLRWAMLDQLCNPPA----GFEEVVYNHFKLK-----RETILVQLERWVAECTQGTSSTSKEHQKRMADCLAALKQQFSRL 3946
BLAST of EWM26162.1 vs. NCBI_GenBank
Match: gi|330929913|ref|XP_003302819.1| (hypothetical protein PTT_14787 [Pyrenophora teres f. teres 0-1] >gi|311321570|gb|EFQ89086.1| hypothetical protein PTT_14787 [Pyrenophora teres f. teres 0-1]) HSP 1 Score: 83.5741 bits (205), Expect = 2.471e-14 Identity = 53/122 (43.44%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 10 LVCLSLLGTWSGEPWDPAHSNLSQLFISILAFIFTTEPLRNEPGLEASSPATVA----LYNAYLRLETLRTAMIGTLARPPALPPSEFEGVVKQHFREAWAGAIRPDLMQWGEREVLGEGGR 127 VCLSLLGTW GEPWDPA S L Q+ +SI A I EP NEPG E + YNA +R T+R A++ L PP L ++ VV HF+E AI + +W RE G R Sbjct: 1062 FVCLSLLGTWDGEPWDPAVSTLLQILVSIQAMILCEEPWYNEPGREMHYSSVNNNLSRTYNAAIRKMTVRYALLDWLENPPRL----WQDVVDYHFKEH-GNAILKTVEEWT-REANTSGPR 1177 The following BLAST results are available for this feature:
BLAST of EWM26162.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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