EWM26175.1, cds4508 (CDS) Nannochloropsis gaditana

Overview
NameEWM26175.1
Unique Namecds4508
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:819865..820234 -
Alignment locationCM002463.1:819435..819631 -

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Properties
Property NameValue
Protein idEWM26175.1
ProductSHQ1 protein
Orig transcript idgnl|cribi|Naga_100121g11.10147.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:819865..820234 -
CM002463.1supercontigCM002463.1:819435..819631 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR007009SHQ1
Homology
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BLAST of EWM26175.1 vs. NCBI_GenBank
Match: gi|585108171|gb|EWM26175.1| (SHQ1 protein [Nannochloropsis gaditana])

HSP 1 Score: 361.303 bits (926), Expect = 6.016e-126
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 
Query:    1 MLLRCLLRMRRVFRLTETHYLLNRLFLDDYCVCLQLPEGDKIVWELAEAWREGAKGVEKAEVGLGLIELEALAAQGGAEEEDEDDDDDDDDDDDDDDDDDDDDDDDDDKSSEQEEEEETESGEKAEARDREWVIDAFAATERADGPWRRGGKGERGRMRRAEEGKAISRGALRDRTDLAPSTAITYKT 188
            MLLRCLLRMRRVFRLTETHYLLNRLFLDDYCVCLQLPEGDKIVWELAEAWREGAKGVEKAEVGLGLIELEALAAQGGAEEEDEDDDDDDDDDDDDDDDDDDDDDDDDDKSSEQEEEEETESGEKAEARDREWVIDAFAATERADGPWRRGGKGERGRMRRAEEGKAISRGALRDRTDLAPSTAITYKT
Sbjct:    1 MLLRCLLRMRRVFRLTETHYLLNRLFLDDYCVCLQLPEGDKIVWELAEAWREGAKGVEKAEVGLGLIELEALAAQGGAEEEDEDDDDDDDDDDDDDDDDDDDDDDDDDKSSEQEEEEETESGEKAEARDREWVIDAFAATERADGPWRRGGKGERGRMRRAEEGKAISRGALRDRTDLAPSTAITYKT 188
The following BLAST results are available for this feature:
BLAST of EWM26175.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Position :
0
Zoom :
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01SequenceEWM26175.1
Match NameE-valueIdentityDescription
gi|585108171|gb|EWM26175.1|6.016e-126100.00SHQ1 protein [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4519rna4519Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications