EWM26163.1, cds4507 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26163.1 vs. NCBI_GenBank
Match: gi|585108159|gb|EWM26163.1| (chaperone protein dnaj [Nannochloropsis gaditana]) HSP 1 Score: 1264.98 bits (3272), Expect = 0.000e+0 Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 0
Query: 1 MFHHHDHRSMTGTTTSDVSHWPTRPAVVPFFLSFLLAVFSLLPSVLDAFHHHPSPPSHVPVSTVSPSQGCKPHTTRFISRLSASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFDRRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAGFVSEAVDREGAIQARLEAVEAASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTADVEVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGVQERLSQTSLDLQEALAAVAPSRRVWQEAQAREASLLAQLKSQSKEEAALRQELAMAVRRREMARREFLAAERRTGLFQKGVMELAGQIERKYNEALAGSGITSTSGATSAAAASEAGQDLGRRTGPETGVGKEVSGEARMRRQREAFDLVFGSIRKRSRGPTQGKKTDTAVEEGVGPGSNDDPATSGDWDSSEEPGEPLEEASSVQAPAASTAAAPRAEPEKPVEGGGAQEMERDPAQQELQGVGR 637
MFHHHDHRSMTGTTTSDVSHWPTRPAVVPFFLSFLLAVFSLLPSVLDAFHHHPSPPSHVPVSTVSPSQGCKPHTTRFISRLSASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFDRRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAGFVSEAVDREGAIQARLEAVEAASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTADVEVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGVQERLSQTSLDLQEALAAVAPSRRVWQEAQAREASLLAQLKSQSKEEAALRQELAMAVRRREMARREFLAAERRTGLFQKGVMELAGQIERKYNEALAGSGITSTSGATSAAAASEAGQDLGRRTGPETGVGKEVSGEARMRRQREAFDLVFGSIRKRSRGPTQGKKTDTAVEEGVGPGSNDDPATSGDWDSSEEPGEPLEEASSVQAPAASTAAAPRAEPEKPVEGGGAQEMERDPAQQELQGVGR
Sbjct: 1 MFHHHDHRSMTGTTTSDVSHWPTRPAVVPFFLSFLLAVFSLLPSVLDAFHHHPSPPSHVPVSTVSPSQGCKPHTTRFISRLSASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFDRRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAGFVSEAVDREGAIQARLEAVEAASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTADVEVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGVQERLSQTSLDLQEALAAVAPSRRVWQEAQAREASLLAQLKSQSKEEAALRQELAMAVRRREMARREFLAAERRTGLFQKGVMELAGQIERKYNEALAGSGITSTSGATSAAAASEAGQDLGRRTGPETGVGKEVSGEARMRRQREAFDLVFGSIRKRSRGPTQGKKTDTAVEEGVGPGSNDDPATSGDWDSSEEPGEPLEEASSVQAPAASTAAAPRAEPEKPVEGGGAQEMERDPAQQELQGVGR 637
BLAST of EWM26163.1 vs. NCBI_GenBank
Match: gi|553180297|ref|XP_005853382.1| (chaperone protein [Nannochloropsis gaditana CCMP526] >gi|422295680|gb|EKU22979.1| chaperone protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1221.45 bits (3159), Expect = 0.000e+0 Identity = 619/628 (98.57%), Postives = 622/628 (99.04%), Query Frame = 0
Query: 10 MTGTTTSDVSHWPTRPAVVPFFLSFLLAVFSLLPSVLDAFHHHPSPPSHVPVSTVSPSQGCKPHTTRFISRLSASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFDRRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAGFVSEAVDREGAIQARLEAVEAASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTADVEVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGVQERLSQTSLDLQEALAAVAPSRRVWQEAQAREASLLAQLKSQSKEEAALRQELAMAVRRREMARREFLAAERRTGLFQKGVMELAGQIERKYNEALAGSGITSTSGATSAAAASEAGQDLGRRTGPETGVGKEVSGEARMRRQREAFDLVFGSIRKRSRGPTQGKKTDTAVEEGVGPGSNDDPATSGDWDSSEEPGEPLEEASSVQAPAASTAAAPRAEPEKPVEGGGAQEMERDPAQQELQGVGR 637
MTGTTTSDVSHWPTRPAVVPFFLSFLLAVFSLLPSVLDAFHHHPSPPSHVPVSTVSPSQGCKPHTTRFISRLSASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQ+FLAIKEAYETLYDARRRAEFDRRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAG VSEAVDREGAIQARLEAVE ASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTAD EVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGV+ERLSQTSLDLQEALAAVAPSRRVWQEAQAREASLLAQLKSQSKEEAALRQELAMAVRRREMARREFLAAERRTGLFQKGVMELAGQIERKYNEALAGSGITSTSGATSAAAASEAGQDLGRRTGPETGVGKEVSGEAR RRQREAFDLVFGSIRKRSRGPT+GKKTDTAVEEGVGPGS DDPATSGDWDSSEEPGEPLEEASSVQAPAASTAAAPRAEPE PVEGGGAQEMERDPAQQELQGVGR
Sbjct: 1 MTGTTTSDVSHWPTRPAVVPFFLSFLLAVFSLLPSVLDAFHHHPSPPSHVPVSTVSPSQGCKPHTTRFISRLSASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQDFLAIKEAYETLYDARRRAEFDRRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAGLVSEAVDREGAIQARLEAVEGASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTADAEVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGVRERLSQTSLDLQEALAAVAPSRRVWQEAQAREASLLAQLKSQSKEEAALRQELAMAVRRREMARREFLAAERRTGLFQKGVMELAGQIERKYNEALAGSGITSTSGATSAAAASEAGQDLGRRTGPETGVGKEVSGEARKRRQREAFDLVFGSIRKRSRGPTRGKKTDTAVEEGVGPGSKDDPATSGDWDSSEEPGEPLEEASSVQAPAASTAAAPRAEPENPVEGGGAQEMERDPAQQELQGVGR 628
BLAST of EWM26163.1 vs. NCBI_GenBank
Match: gi|1020706930|gb|KZM26911.1| (hypothetical protein ST47_g1944 [Ascochyta rabiei]) HSP 1 Score: 67.781 bits (164), Expect = 1.959e-8 Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 0
Query: 87 DYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFDR 149
DYY VLG++P ATP + RA+++ A HPD + + D TQ F + AYETL D +R E+DR
Sbjct: 3 DYYMVLGVAPSATPELITRAYKQLALKLHPDRNTNQDATQAFQLLSRAYETLRDEIKRREYDR 65
BLAST of EWM26163.1 vs. NCBI_GenBank
Match: gi|299469678|emb|CBN76532.1| (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 67.3958 bits (163), Expect = 5.258e-8 Identity = 105/386 (27.20%), Postives = 163/386 (42.23%), Query Frame = 0
Query: 83 ASKTDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFD------------RRRQLAEVADLAVSVGEILTRDVAVPLARDVALPLIKTAFEGLDQTVIKQFATPILKRTLQQSAAAVEAVRQVAQDRAQYFTQVQASWRAEEIRSLTQQLEEMTAKAKDARAQVKEAAGFVSEAVDREGAIQARLEAVEAASESSAAAMQGLREESRRALSDFQERVAEEAERRQAARRLKTEETRVLAANKRLEAFALTADVEVAEAEEVLRRAQTRMEKARQARERAQGLLKTSQEEADGVQERLSQTSLDLQEALAAVAPSRRVWQEAQAREASL--LAQLKSQSKEEAALRQELAMAVRRREMA 454
A + DYY+ LGL GATP E+K A+R+ A HPD+ + F + AYE L D +++ +D + + V S+G T V V A PL K GL++ PI ++ + A +EA R+ R + RAEE + +LEE + Q++E + V+R R+E A++ S + + + +E+ SD R A E + ARR + L A+ E TA+ V AE L A ++ AR +L + EEA ++ Q +A A + V++E A+EA+L A L Q + AAL++E + RR E A
Sbjct: 133 ADEVDYYAALGLKVGATPTEIKNAYRKIAMRVHPDTKDGINNRDIFESTTAAYEVLSDPGKKSTYDQGLAMRSFVDKVKAGKWGNVMSAVASLGAAAT-SVGVSAGVAAAEPLAKDLARGLEELTGSVEVDPITRKQQVANRAKLEAERK----RGAFER------RAEEFSTEASKLEETM------KTQLEEQKEWNKALVER------RIEV--ASARKSLESTESITKEAAEVASD---RKASELAAAEKARRSRAAREEFLQASANSEKKVSTAEATVTAAERRLWEALKTLDTARH-------MLALTYEEATALEGTRDQV-------MADTASAEGVFEE--AKEATLESKAALSQQRTDLAALQREFRESSRREEQA 474
BLAST of EWM26163.1 vs. NCBI_GenBank
Match: gi|242036347|ref|XP_002465568.1| (chaperone protein dnaJ 11, chloroplastic [Sorghum bicolor] >gi|241919422|gb|EER92566.1| hypothetical protein SORBI_3001G438700 [Sorghum bicolor]) HSP 1 Score: 61.2326 bits (147), Expect = 2.343e-7 Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 0
Query: 86 TDYYSVLGLSPGATPAEVKRAFRERAKTTHPDSSRSADTTQEFLAIKEAYETLYDARRRAEFDRRRQLA 154
+ +Y VLGL PGA+ E+K A+R A HPD++ +A + ++F+ + AY TL D +RA++DRR L+
Sbjct: 60 SSFYDVLGLRPGASAREIKAAYRRLALAVHPDAAAAASSAEDFIRVHAAYSTLSDPDKRADYDRRLLLS 128 The following BLAST results are available for this feature:
BLAST of EWM26163.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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