EWM26165.1, cds4500 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|585108161|gb|EWM26165.1| (Protein of unknown function DUF4336 [Nannochloropsis gaditana]) HSP 1 Score: 679.478 bits (1752), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
Query: 1 MPRTGLLLWPICTGAIVLVLLFVARASAFLHHQCHRRRLSRQCAALRARTPKMSSEIDETSTIQRQKLFLPFPPSVRPTSLVFSDAQHKVWTFEQPFITTTNIKTRMSVFKCETSIVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWKLFGVSGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEEVKRIFLQSFDFILR 330
MPRTGLLLWPICTGAIVLVLLFVARASAFLHHQCHRRRLSRQCAALRARTPKMSSEIDETSTIQRQKLFLPFPPSVRPTSLVFSDAQHKVWTFEQPFITTTNIKTRMSVFKCETSIVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWKLFGVSGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEEVKRIFLQSFDFILR
Sbjct: 1 MPRTGLLLWPICTGAIVLVLLFVARASAFLHHQCHRRRLSRQCAALRARTPKMSSEIDETSTIQRQKLFLPFPPSVRPTSLVFSDAQHKVWTFEQPFITTTNIKTRMSVFKCETSIVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWKLFGVSGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEEVKRIFLQSFDFILR 330
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|585113160|gb|EWM30496.1| (Protein of unknown function DUF4336 [Nannochloropsis gaditana]) HSP 1 Score: 103.219 bits (256), Expect = 2.987e-21 Identity = 76/270 (28.15%), Postives = 138/270 (51.11%), Query Frame = 0
Query: 65 RQKLFLP--FPPSVRPTSLVFSDAQHKVWTFEQPFI-TTTNIKTRMSVFK-CETSIVMYSPIAATPECCDMVRNIVGG-----MPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWKLFGVSGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEEVKRIFLQSF 325
R +++ P PP +PT+L+ SD + +W FEQPF+ ++K RMSV + + +YSP+AATPEC DM++++V + ++ S+ +H L WR P A+++++ PR + + LP P ++ ++ A+ + P RE+VL HKPSKTL AD+ + ++ +S ++ +L G+ P +F K+ + ++ ++V+ WG ++ + H AA+ EE +E FL+ +
Sbjct: 132 RDQIYEPSLLPPRKKPTTLLISDRKRGLWVFEQPFVLGVVDVKNRMSVLRLSDGGFALYSPLAATPECIDMLKSLVKSEKLSLSSAWFMVPSSFPEHHESLVTWREVFPEARVVSVHPRINVISEFLLEGPSTDAPSQLPFPLRKD----LDVAVYET-PLLREMVLTHKPSKTLFVADSGF-YINEEYSNSLTRGIT-QLQGIYDRFVTPPFFRLGMNKK-EGKRLYERVKDWG-FDKIVTCH------AALVEEGKGKEA---FLEGY 383
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|1035641792|gb|OAX83485.1| (hypothetical protein ACJ72_02155 [Emmonsia sp. CAC-2015a]) HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-12 Identity = 84/287 (29.27%), Postives = 124/287 (43.21%), Query Frame = 0
Query: 67 KLFLPFPPSVRPTSLVFSDAQHKVWTFEQPF--ITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVE-----AALLDIEPFF----REIVLFHKPSKTLLCADAIWRV-VSPTFSPNIVAATGW---KLFGV--------SGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEEVKRIFLQSFDFIL 329
KL P P V +V Q + T PF I R ++ + ++ +V++SP+A TP+ D V N +GG YI+ ++H IFL W+ A P+AQI I+P K+ + G I F N+ ++ A D+E F REIVL HKPSK+L+ AD ++ + + FS + +AT KLF G RF W+ + R Q + W +R +P H D I + K IF FD+ L
Sbjct: 4 KLVPPRPEDV----MVIRKVQSDIITLNVPFYRFGYAKIGGRCTIVRLQSGPLVVFSPVALTPDARDAV-NSLGGNVKYIVAPD--MEHHIFLTSWKEAYPNAQI--IAPEGLKEKREKNPETRG---ISFDYIFTAANRRTLKISDEFHADFDVEYFHSHPSREIVLLHKPSKSLIEADLLFNLPATEQFSRSGESATEGIISKLFSTFQSTKPPALGQKRF-IWYVLSAKDRKGFAQSAATIVGWN-FDRIIPCHGDVIESGG----------KEIFRNLFDWNL 266
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|821506959|gb|KKZ63705.1| (hypothetical protein EMCG_02012 [Emmonsia crescens UAMH 3008]) HSP 1 Score: 73.1738 bits (178), Expect = 3.379e-11 Identity = 75/258 (29.07%), Postives = 115/258 (44.57%), Query Frame = 0
Query: 67 KLFLPFPPSVRPTSLVFSDAQHKVWTFEQPF--ITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVEA--ALLDIEPFF----REIVLFHKPSKTLLCADAIWRV-VSPTFSPNIVAATGWKLFGV-----------SGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAI 303
KL P P V +V Q+ + T PF I R ++ + + +V++SP+A TP+ + V N +GG YII ++H IF+ W+ A P+AQI I+P K+ + G + + N I + A D+E REIVL HKPSKTL+ AD ++ + + FS + +AT L V G RF W+ + R Q ++ W + +R +P H D I
Sbjct: 4 KLVPPRPEDV----MVIRKVQNDIITLNVPFYRFGYARIGGRCTIVRLQNGPLVVFSPVALTPDAREAV-NSLGGNVKYIIAPD--LEHHIFVTPWKEAYPNAQI--IAPEGLKEKREKNPETRGVGYDHIFTAANKRNLKISDEFHANFDVEYVNSHPSREIVLLHKPSKTLIEADLLFNLPATEQFSKSGESATDGILTKVFSTFQSTQPPAMGQKRF-IWYVLSAKDRKGFAQSAAMIEGW-DFDRIIPCHGDVI 250
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|1103679780|gb|OJD16692.1| (hypothetical protein AJ78_03162 [Emergomyces pasteuriana Ep9510]) HSP 1 Score: 70.4774 bits (171), Expect = 2.638e-10 Identity = 70/261 (26.82%), Postives = 114/261 (43.68%), Query Frame = 0
Query: 67 KLFLPFPPSVRPTSLVFSDAQHKVWTFEQPF--ITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFF------REIVLFHKPSKTLLCADAIWRV-VSPTFSPNIVAATGW---KLFGVSGVSRFP-------YWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAA 307
KL P P V +V Q + T PF + R ++ + ++ +V++SP+A TP+ D V N +GG YII ++H IFL W+ A P+A+I I+P K+ + G + R + I + D + + REIVL HKPSK+L+ AD ++ + + FS + +AT K+F ++ P W+ + R Q ++ W R +P H D I +
Sbjct: 4 KLVPPHPEDV----MVVRKVQSDIVTLNVPFYRFGYAKVGGRCTIVRLQSGPLVVFSPVALTPDARDAV-NSLGGNVKYIIAPD--MEHHIFLTPWKEAYPNARI--IAPEGLKEKREKNPETRGVEIDHIFTAANRRSLKISDEFHADFDVEYVNSHPSREIVLLHKPSKSLIEADLLFNLPATEQFSKSRESATEGIVTKIFSTFQTTKPPAMGQKRLIWYVLSAKDRNGFAQSAATIEGWN-FNRIIPCHGDVIESGG 254
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|648395666|ref|WP_026087417.1| (hypothetical protein [Chlorogloeopsis fritschii]) HSP 1 Score: 70.8626 bits (172), Expect = 4.234e-10 Identity = 61/182 (33.52%), Postives = 88/182 (48.35%), Query Frame = 0
Query: 70 LPFPPSVRPTSLVFSDAQHKVWTFEQ-PFITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVG--GMPTYIIM-QSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPM-LKDSSSGGETAIILPLPFQRGNQPIV---EAALLDIE---PFFREIVLFHKPSKTLLCADAIWRV 239
LP P + +L + +WTFEQ I T RM+V K ET + +Y+P+A T EC M+ +V G YII+ S+ ++H IF+ + R P AQ+ ++P + P L S G LP P E A+LDI+ F E+ + HK S+TLL D+I V
Sbjct: 30 LPLYPYGKRQTLCREIIEDTIWTFEQLQGILYTIAPIRMTVIKLETGGLFVYAPVAPTAECVRMINELVAEHGDIKYIILPTSSGLEHKIFVGPFARCFPQAQVF-VAPNQWSFPFNLPLSWLGFPQKRTQELPEDASLAPFANEFEYAVLDIDLGRGSFAEVAVLHKRSRTLLVTDSILSV 210
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|504984933|ref|WP_015172035.1| (DUF4336 domain-containing protein [Geitlerinema sp. PCC 7407] >gi|427985325|gb|AFY66469.1| hypothetical protein GEI7407_1988 [Geitlerinema sp. PCC 7407]) HSP 1 Score: 70.8626 bits (172), Expect = 4.884e-10 Identity = 60/185 (32.43%), Postives = 93/185 (50.27%), Query Frame = 0
Query: 87 QHKVWTFEQ-PFITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVG--GMPTYIIMQS-NAIDHTIFLNGWRRAVPSAQILNISPREGDLPM-LKDSSSGGETAIILPLPFQRGNQPIVE----AAL----LDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWKLF 257
+ +WTF+Q I + RM+V + E +++YSP+A TPEC +V +V G YII+ + + I+H +F+ + R P+AQ+ I+P + P+ L S G LP G P + A L L + P F E+ FH+ S+TLL D++ VV P P IV+ + L
Sbjct: 53 KDTIWTFDQLQGILYVVVPIRMTVVRLEAGGLLVYSPVAPTPECIRLVEELVSRHGEVKYIILPTVSGIEHKVFVGPFARCFPAAQVF-IAPDQWSFPLNLPLSWLGLPARRTQVLPTDSGKAPFADEFDYAMLGPIDLGLGP-FEEVAFFHRRSRTLLVTDSV--VVIPERPPAIVSLDPYPLL 233
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|671156415|ref|XP_008716773.1| (hypothetical protein HMPREF1541_04205 [Cyphellophora europaea CBS 101466] >gi|568119657|gb|ETN42264.1| hypothetical protein HMPREF1541_04205 [Cyphellophora europaea CBS 101466]) HSP 1 Score: 69.707 bits (169), Expect = 5.008e-10 Identity = 72/270 (26.67%), Postives = 119/270 (44.07%), Query Frame = 0
Query: 61 STIQRQKLFLPFPPSVRPTSLVFSDAQHKVWTFEQPFITTTNIK--TRMSVFKCET-SIVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNIS----PREGDLPMLKDSSSGGETAIILPLPFQRGNQPIVE-AALLDIEPFF----REIVLFHKPSKTLLCADAIWRV-VSPTFSPNIVAATGW---KLFGVSGVSRF-------PYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAA 307
S K +P PS +V D H + TF PF+ IK R ++ K ++ S+ ++SP+A T E + + GG YI+ I+H IF+ W A P A+++ + REGD ++ G + + +R + E + ++E F +E+ + HKPS+TL+ AD ++ + + FS + AAT KLFG +R W+ RA + +V W + +R +P H D I
Sbjct: 2 SVSNSAKSLIPSDPS---KVMVIRDVHHTITTFSTPFLRFGRIKIGGRGTLVKLQSGSLAIFSPVALTDEVKSTIAS-KGGAVRYIVAPD--IEHHIFVTPWAHAYPDAEVIGVEGLPEKREGDA-----ATKGVKFHHVFSASNKRDLKVSPEFDSEFEVEYFHSHQNKELAVLHKPSRTLIEADLLFNLPATEQFSKSGTAATSGILTKLFGGIMNTRGNMAWQKRATWYGPGSSDRAAFGESARRVSGW-DFDRIVPCHGDVIETGG 259
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|1054659241|ref|WP_066426380.1| (DUF4336 domain-containing protein [Anabaena sp. 4-3]) HSP 1 Score: 70.8626 bits (172), Expect = 5.228e-10 Identity = 58/181 (32.04%), Postives = 91/181 (50.28%), Query Frame = 0
Query: 68 LFLPFPPSVRPTSLVFSDAQHKVWTFEQPF-ITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVG--GMPTYIIM-QSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPM-LKDSSSGGETAIILPLPFQRGNQPI---VEAALLDIE---PFFREIVLFHKPSKTLLCADAI 236
L LP P R +L + +WTFEQ I T + RM+V K + +++Y+PIA T EC +V N+V G YII+ S+ ++H IF+ + R P+A++ ++P + P L S G LP P ++ A+LDI F E+ ++H+ S TLL D++
Sbjct: 22 LALPVYPYSRRRTLCREIVKDTIWTFEQLHGILYTIVPIRMTVIKLDAGGLLVYAPIAPTVECVRLVNNLVAKHGAVKYIILPTSSGLEHKIFVGPFARQFPAARVF-VAPHQWSFPFNLPLSWLGFPQKRTHILPEDSSQAPFGDELDYAILDINLGRGSFVEVAMYHRRSHTLLVTDSV 201
BLAST of EWM26165.1 vs. NCBI_GenBank
Match: gi|516251552|ref|WP_017655515.1| (DUF4336 domain-containing protein [Fortiea contorta]) HSP 1 Score: 70.4774 bits (171), Expect = 5.716e-10 Identity = 54/179 (30.17%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 70 LPFPPSVRPTSLVFSDAQHKVWTFEQ-PFITTTNIKTRMSVFKCETS-IVMYSPIAATPECCDMVRNIVG--GMPTYIIM-QSNAIDHTIFLNGWRRAVPSAQILNISPREGDLPM-LKDSSSGGETAIILPLPFQRGNQPIV---EAALLDI---EPFFREIVLFHKPSKTLLCADAI 236
+P P + +L F + +W FEQ I T + RM++ K E +++Y+P+A TPEC ++ +V G YII+ S+ ++H +F+ + R P A++ ++P + P L S G LP P + A+LDI + F E+ FHK S+TLL D++
Sbjct: 19 VPLYPYGKRRTLSFEVVKDTIWIFEQLQGILHTIVPIRMTIIKLEAGGLLIYAPVAPTPECVRLINELVSEHGAVKYIILPTSSGLEHKVFVGPFARRFPQAEVF-VAPHQWSFPFNLPLSWLGFPQKRTQVLPTDDRQAPFAHEFDYAILDINLGKGSFVEVAFFHKRSRTLLVTDSV 196 The following BLAST results are available for this feature:
BLAST of EWM26165.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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