EWM30276.1, cds450 (CDS) Nannochloropsis gaditana

Overview
NameEWM30276.1
Unique Namecds450
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1121044..1122702 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30276.1
Producthippocampus abundant transcript 1
Orig transcript idgnl|cribi|Naga_100003g31.1793.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1121044..1122702 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
IPR001958Tet-R_TetA/multi-R_MdtG
Homology
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|585112935|gb|EWM30276.1| (hippocampus abundant transcript 1 [Nannochloropsis gaditana])

HSP 1 Score: 1115.52 bits (2884), Expect = 0.000e+0
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0
Query:    1 MSTSTFAQLCARSEAFFSSVVSSPKLIPEAARATSAATRTSRPSPATSSPCTVDERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEGPNEEEKESESEQQSPEGHLPKDLTKQSTTKPSASTLQASQLGQKHEPKHELKQVCSV 552
            MSTSTFAQLCARSEAFFSSVVSSPKLIPEAARATSAATRTSRPSPATSSPCTVDERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEGPNEEEKESESEQQSPEGHLPKDLTKQSTTKPSASTLQASQLGQKHEPKHELKQVCSV
Sbjct:    1 MSTSTFAQLCARSEAFFSSVVSSPKLIPEAARATSAATRTSRPSPATSSPCTVDERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEGPNEEEKESESEQQSPEGHLPKDLTKQSTTKPSASTLQASQLGQKHEPKHELKQVCSV 552          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|298710853|emb|CBJ26362.1| (Hippocampus abundant transcript 1 protein (Putative tetracycline transporter-like protein) [Ectocarpus siliculosus])

HSP 1 Score: 407.142 bits (1045), Expect = 1.453e-133
Identity = 222/464 (47.84%), Postives = 293/464 (63.15%), Query Frame = 0
Query:   55 ERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRST--------------------EQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEGPNE 498
            E RYL VLPVLF+E+LAL+L R LLP LM   +G +TY V+G+++T KG+LAF+ACP+FG+LSDV+GR+  LF+TVLGT  P+ +L ++ ++WI+A A   SG FA+TF + F+YI DLV   RR+ AYGLALATFGLS+ LGP +G ++A      AVF  SV  + + + +I + LPES                       E QR R       A     +      W+P + L+ FSG PLL++ +KI  LYYT VWA+VSTLMV+V R F    V +G+L+SAFGVCTM +EGVLVR MVP  GEK  +QIGL  FA QC     A     V  S+  S L+NLVYP++SSL+SRSV  SKQGE LGA+NG+RALTEGFGPLLF  L +  +DT  PG PYL+A+   +AALL + ++P   +         + +GL   +G   ++ P  E GEG  E
Sbjct:   15 ESRYLLVLPVLFYEFLALALIRGLLPTLMLDFWGKWTYTVIGVIDTGKGLLAFVACPMFGRLSDVIGRKKCLFVTVLGTASPVIALCISNNLWIFAGAAAFSGCFAATFPLVFSYIGDLVPPRRRAPAYGLALATFGLSFSLGPAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAGGEEAGGGLRKELQRSR------TASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAID--------DEDSGLL--LGTFGKDLP--EGGEGAEE 460          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|1210525439|dbj|GAX15782.1| (hypothetical protein FisN_3Lh225 [Fistulifera solaris])

HSP 1 Score: 372.089 bits (954), Expect = 1.814e-119
Identity = 224/524 (42.75%), Postives = 311/524 (59.35%), Query Frame = 0
Query:   33 ATSAATRTSRPSPATSSPCTVDERRY--LYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLAL-------------------TQSMW----------------------IYAVAQGLSGVFASTFTITFAYIADLVHK-ERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTE-QQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPS-EAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEG-PNEEEKESESEQQS 509
            A++  TR +  +P   S  +  E++Y  LYVLPVL  E+LA++L+RA+LPGL+   +G+  Y V+G  E  +G+LAF+ACP FGKLSDV+GR+  LF+TVLGT  P+  LA                      + W                      ++ +   LSG+F+STFT+ FAYI+D VH+ + R SAYGLALATFGLS+ +GPI+GG+LA++ + + VF  S+   V+ +AYI  ILPESRS +        I L+       +     SW P+  L + + +P LR V ++ FLYY G+WAI+STL V+  + FH     LGELMSA G+ TML+E VLVR MVP  GEK AM++GL +F LQC    FA     +    +FS L NLVYP++SSLVS SV P   GEALGA+NGI+ALTEG GPL+FGSLM L + +  PG PYLLAS    AA    ++LP  E + + +E    ++ G +  +  L      ++E EG  +E ++ S+ E+ S
Sbjct:   16 ASNNNTRLAVNAPTQISSSSFSEQKYQHLYVLPVLLLEFLAIALTRAILPGLLLQKYGDSVYLVMGCTECVRGLLAFLACPFFGKLSDVIGRKVCLFVTVLGTCAPVCVLAFFSWDTQQQQTEESNMSTSTDDNFWSSLLDPAANEVAMSAFHPNAVTVFVILLALSGIFSSTFTLVFAYISDTVHRQDERVSAYGLALATFGLSFTMGPIVGGYLAQQ-NKQYVFLTSLLLTVVDLAYIYFILPESRSIDVPSSAASTISLMTL-----DHNFSSSWKPWDSLRLIATDPFLRKVGEVAFLYYIGLWAIISTLSVYAVKRFHLTPERLGELMSALGLSTMLAEAVLVRFMVPWLGEKKAMKVGLVSFGLQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEEDDYIHELERKQKGGFE--LFALGRHRQNDDEVEGLLSEIDEYSDHEETS 531          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|1210525100|dbj|GAX16292.1| (hypothetical protein FisN_3Hh225 [Fistulifera solaris])

HSP 1 Score: 368.622 bits (945), Expect = 2.280e-118
Identity = 221/502 (44.02%), Postives = 303/502 (60.36%), Query Frame = 0
Query:   55 ERRY--LYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLAL-------------------TQSMW----------------------IYAVAQGLSGVFASTFTITFAYIADLVHK-ERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQ-QRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPS-EAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEG-PNEEEKESESEQQS 509
            ER+Y  LYVLPVL  E+LA++L+RA+LPGL+   +G+  Y V+G  E  +G+LAF+ACP FGKLSDV+GR+  LF+TVLGT  P+  LA                      + W                      ++ +   LSG+F+STFT+ FAYI+D VH+ + R SAYGLALATFGLS+ +GPI+GG+LA++ + + VF  S+   V+ +AYI  ILPESR  +        I L+       +     SW P+  L + + +P LR V ++ FLYYTG+WAI+STL V+  + FH     LGELMSA G+ TML+E VLVR+MVP  GEK AM++GL +FALQC    FA     +    +FS L NLVYP++SSLVS SV P   GEALGA+NGI+ALTEG GPL+FGSLM L + +  PG PYLLAS    AA    ++LP  E + + +E    ++ G +  +  L      ++E EG  +E ++ S+ E+ S
Sbjct:   15 ERKYQHLYVLPVLLLEFLAIALTRAILPGLLLQKYGDNVYLVMGCTECVRGLLAFLACPFFGKLSDVIGRKVCLFVTVLGTCAPVCVLAFFSWDTQQSPTEESSMSSSTDDNFWSSLLDPATNEVAMSAFHPNAITVFVILLALSGIFSSTFTLVFAYISDTVHRQDERVSAYGLALATFGLSFTMGPIVGGYLAQQ-NKQYVFLTSLLLTVVDLAYIYFILPESRPIDAPSSAASTISLMTL-----DHNFSSSWKPWDSLRLIATDPFLRKVGEVAFLYYTGLWAIISTLSVYAVKRFHLTPERLGELMSALGLSTMLAEAVLVRVMVPWLGEKKAMKVGLVSFALQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEEDDYIHELERKQKGGFE--LFALGRNRQNDDEVEGLLSEIDEYSDHEETS 508          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|219109601|ref|XP_002176555.1| (transporter, major facilitator superfamily and tetracycline resistance protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411090|gb|EEC51018.1| transporter, major facilitator superfamily and tetracycline resistance protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 349.747 bits (896), Expect = 3.955e-113
Identity = 187/374 (50.00%), Postives = 255/374 (68.18%), Query Frame = 0
Query:   60 YVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLV-HKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESR-----STEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLM 427
            YVLPVL  E+LA++L+RA+LP L+   +G+  Y V+GI +  +G+LAF ACP+FGKLSD++GRR  LF+TV+GT  P        ++ ++ V   LSG+F+STFT+ FAYI+D V  ++ R SAYGLALATFGLS+ +GP+ GG+LA+  + + VF  S+   ++ +AYI  ILPESR     ST     +  I L    M    ++   SW+P+  L++ + +P LR V ++ FLYYTG+WA++STL V+  R FH +   LGELMSA G+CTM++E VLVR+MVP  GEK A ++GL +FALQC    FA     +     FS L NLVYP+++SLVS SV P   GEALGA+NGI+ALTEG GPL+FGSLM
Sbjct:    1 YVLPVLLLEFLAVALTRAVLPSLLLQQYGSSVYLVMGIADCVRGLLAFCACPIFGKLSDLIGRRICLFVTVMGTCAPQRDAVHPYAVTVFIVLLSLSGIFSSTFTLVFAYISDTVRQQDERVSAYGLALATFGLSFTIGPMAGGYLAQT-NKQYVFLSSLILTIVDLAYIYFILPESRIQQDGSTFDSLNKSSISL----MTLDHNF---SWNPWDTLKLITADPFLRKVGQVAFLYYTGLWALISTLSVYAVRRFHLNPERLGELMSALGLCTMVAEAVLVRVMVPLLGEKKATKVGLVSFALQCVVLGFAYEGWHLFVCAGFSLLGNLVYPSLTSLVSGSVEPDAVGEALGAVNGIKALTEGIGPLVFGSLM 366          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|1072236058|gb|OEU20786.1| (MFS general substrate transporter, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 330.872 bits (847), Expect = 2.718e-105
Identity = 184/412 (44.66%), Postives = 259/412 (62.86%), Query Frame = 0
Query:   55 ERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSG---VFASTFTITFAYIADLVH-KERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAE 462
            + ++LYVLPVL  E+LA++L+RA+LP ++   +G+  Y +LG  +  +G+LAF ACPLFGKLSDV+GR+  LF+TVLG+  P+ SLA     W  A +  +S    +F+STFT+ FAYI+D VH +  R +AYGLALATFGLS+ +GP+ GG+LA       VF  S+   +L + YI +ILPES S      R  +     G+        +SWSP+  + +   +P LR + ++ F YYTG+WA++STL ++  + F      LGELMS  G+ TM++E +L+R +VP  GEK  +++GL +F LQC     A     +   +  S L NLVYP++SSLVS  V P K GEALGA+NGI+ALTEG GPL FG+LM   + T  PG+PY LA      A    +KLP+ +E
Sbjct:    2 QYQHLYVLPVLLMEFLAIALTRAVLPSILIQQYGSNVYLILGCADCVRGVLAFFACPLFGKLSDVLGRKLCLFVTVLGSCAPVCSLAFFT--WDVAESDMISDKGSIFSSTFTLVFAYISDSVHERNERVTAYGLALATFGLSFTIGPMAGGYLANS-KTDYVFQCSLVLTLLDLLYIYMILPESISP-----RIDLFTKMEGIANS-----ISWSPWDSIRLVLHDPFLRKIGQVAFFYYTGLWAVLSTLSLYAVQHFKMTPQVLGELMSCLGLSTMVAEAILIRWLVPMLGEKQTIRVGLISFGLQCIVLGAANEPWQLFLCVGLSLLGNLVYPSLSSLVSGIVEPKKVGEALGAINGIKALTEGIGPLFFGTLMTFSEGTAFPGSPYWLAGILVFVAYHLADKLPANSE 400          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|224001914|ref|XP_002290629.1| (hypothetical protein THAPSDRAFT_262480 [Thalassiosira pseudonana CCMP1335] >gi|220974051|gb|EED92381.1| hypothetical protein THAPSDRAFT_262480 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 310.842 bits (795), Expect = 6.220e-96
Identity = 192/457 (42.01%), Postives = 274/457 (59.96%), Query Frame = 0
Query:   58 YLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQG-----LSGVFASTFTITFAYIADLV-HKERRSSAYGLALATFGLSYCLGPILGGFLAE-----RFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFA-RHIHDVLFSLLFSTL-ANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEEEGEGPNEEEK 501
            +L VLPVL  E+L L+L+RA+LP L+   +G+ TY V+G+ E  +GILAF ACPLFGKLSD  GRR  L +TV+GT LP+ SLA       + V +      LSG+F+STFT+TFAYI+D+V  ++ R +AYGLALATFGLS+ +GP+LGG+LA      +  +R VF  ++   VL + YI  +LPES   ++                        W+P   +   + +PLL ++ ++ FLYYT + A+VSTL+++  R  H     LGELM+A G+ TM+SE VLVR+ +P  GEK AM++GLA+FA+QC   + A R  H  LF   F  +  NLVYP+VSSLVS +V P   G ALGA+NG+++LTEG GPL+FG+L+ + +    PG PY +A+  +  A      LP + +  +    +  +A LQ            EE    P +E++
Sbjct:   96 HLAVLPVLLLEFLPLALTRAVLPSLLLKRYGSRTYIVMGLAECVRGILAFFACPLFGKLSDNFGRRPCLLVTVMGTLLPVCSLAF------WKVDENGEFMALSGMFSSTFTLTFAYISDVVKDRDGRVAAYGLALATFGLSFTIGPLLGGYLANVDDDGKEQHR-VFITTLVLAVLDLFYIHFLLPESLHNKRASSSW-------------------WNPLDSIRYLTSDPLLSTIGRVTFLYYTALHAVVSTLILYAARQLHFGPHRLGELMAALGLSTMVSEAVLVRIAIPALGEKRAMRVGLASFAMQCVLLAVADRPWH--LFGCAFLAIPGNLVYPSVSSLVSTTVRPEMVGRALGAVNGVKSLTEGVGPLVFGTLLTMSEKDALPGWPYFIAAIMAALAYQAGRALPGDEDDSD-STMLYLKASLQR-----------EEYNSSPRDEDE 512          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|676385583|ref|XP_009036070.1| (hypothetical protein AURANDRAFT_37260, partial [Aureococcus anophagefferens] >gi|323453065|gb|EGB08937.1| hypothetical protein AURANDRAFT_37260, partial [Aureococcus anophagefferens])

HSP 1 Score: 205.682 bits (522), Expect = 2.536e-59
Identity = 102/199 (51.26%), Postives = 135/199 (67.84%), Query Frame = 0
Query:   44 SPATSSPCTVDERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQR 242
            +P    P       Y+++LPVLF E+LA++++++LLP  +N  FG   Y V+G+ ET KGI AF+ACPLFG+LSDVVGR + L +TV+GTT P   LA T ++W Y  A GLSG+FASTFT+ FAYIAD+V   RR+ AYG ALAT GLS+ +GP+LG F A R   R VF +++A  +L V  I L LPES     +R
Sbjct:   13 APRERRPVDAKPETYVFILPVLFVEFLAIAVTKSLLPARLNDFFGEEVYMVIGVAETVKGIFAFVACPLFGRLSDVVGRTSCLLVTVVGTTAPCWILAFTDNLWAYVCALGLSGLFASTFTLVFAYIADVVEATRRAPAYGAALATLGLSFTVGPVLGAFAARRVGDRRVFLVALALAILDVLIIGLALPESNEGALRR 211          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|922865580|gb|KOO32609.1| (hippocampus abundant transcript 1 protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 198.364 bits (503), Expect = 4.679e-53
Identity = 122/392 (31.12%), Postives = 207/392 (52.81%), Query Frame = 0
Query:   55 ERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALAT-FGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASA 445
             +R+  V+P+LF ++L +SL   +LP ++N  FG  +Y ++G  +T KG+LAF+  P  G  SD VGR+    +TVLGT  P ++L L  S+ ++ V  GLSG+FA+TF + FAYIAD V    R+SAYG+A+    G +Y +GP +G  + ER+   AVF + +   ++   +  L +   R T++              PPP   L    +PF    +      +R ++ +V  +Y  +W  +S   V+ +R F          ++ FG+ + +S+ V +RL      E    +   A   +    ++FA  +  +  ++    L+   +  VSSL S+ VP +  GEA G +  ++AL EGFGP+ F  ++   +++  PGAP+L+++A
Sbjct:   37 NQRWALVVPILFLDFLVVSLPGGVLPVIINDEFGARSYSLVGWAQTTKGVLAFLTSPALGSCSDAVGRKWLFLLTVLGTACPNAALGLGFSLEVHLVLVGLSGLFAATFPLAFAYIADSVPPHERASAYGVAIGCGLGGAYLIGPPIGAVVNERYGSHAVFQVCLWISIVNALFATLAM---RETDRPP------------PPPMRELLRRANPFGSFAMIRTNKAMRLLAAVVLCFYLALWGFLSNKGVYARRRFKLSVPQTAAQLALFGLVSTISQSVGLRLARKWLSEPQIARRCFACAVMSQLLYAFASDLWVLYPAMALLGLSVGGFATVSSLCSQVVPHALVGEAQGVLASMKALMEGFGPMAFAWMLPRWEESVLPGAPWLVSAA 413          
BLAST of EWM30276.1 vs. NCBI_GenBank
Match: gi|831542056|ref|XP_012724942.1| (hippocampus abundant transcript 1 protein [Fundulus heteroclitus])

HSP 1 Score: 186.808 bits (473), Expect = 3.813e-49
Identity = 114/384 (29.69%), Postives = 200/384 (52.08%), Query Frame = 0
Query:   49 SPCTVDERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSW---SPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFL 429
            SP  + E    + + V+F E+ A  L    +  ++NS F  +T+ + G++   KG+L+F++ PL G LSDV GR++ L +TV  T  PI  + +  S W Y     +SGVFA TF++ FAY+AD+  +  RS+AYGL  ATF  S    P +G +L+E +    V  ++ A  +L + +I++ +PES              L   M P     P+SW    PF+ L     +  +  +   VFL Y       S+  +++++       T+   ++  G+ ++L++ V++ +++   G K  + +GL    LQ A++ F      +  +   + ++++ +PA+S++VSR+  P +QG   G + GIR L  G GP L+G + +L
Sbjct:   28 SPQGIGEPSVYHAVVVIFLEFFAWGLLTTPMLAVLNSTFPRHTFLMNGLIHGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKI--SPWWYFAVISMSGVFAVTFSVIFAYVADITQEHERSTAYGLVSATFAASLVTSPAIGAYLSEAYGDTLVVILATAIALLDICFILVAVPES--------------LPEKMRPASWGAPISWEQADPFASLRKVGQDSTVLLICITVFLSYLPEAGQYSSFFLYLKQVIRFSSETVAAFIAVVGILSILAQTVVLGILMRSIGNKNTILLGLGFQILQLAWYGFGSQPWMMWAAGAVAAMSSITFPAISAIVSRNADPDQQGVVQGMITGIRGLCNGLGPALYGFVFYL 395          
The following BLAST results are available for this feature:
BLAST of EWM30276.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112935|gb|EWM30276.1|0.000e+0100.00hippocampus abundant transcript 1 [Nannochloropsis... [more]
gi|298710853|emb|CBJ26362.1|1.453e-13347.84Hippocampus abundant transcript 1 protein (Putativ... [more]
gi|1210525439|dbj|GAX15782.1|1.814e-11942.75hypothetical protein FisN_3Lh225 [Fistulifera sola... [more]
gi|1210525100|dbj|GAX16292.1|2.280e-11844.02hypothetical protein FisN_3Hh225 [Fistulifera sola... [more]
gi|219109601|ref|XP_002176555.1|3.955e-11350.00transporter, major facilitator superfamily and tet... [more]
gi|1072236058|gb|OEU20786.1|2.718e-10544.66MFS general substrate transporter, partial [Fragil... [more]
gi|224001914|ref|XP_002290629.1|6.220e-9642.01hypothetical protein THAPSDRAFT_262480 [Thalassios... [more]
gi|676385583|ref|XP_009036070.1|2.536e-5951.26hypothetical protein AURANDRAFT_37260, partial [Au... [more]
gi|922865580|gb|KOO32609.1|4.679e-5331.12hippocampus abundant transcript 1 protein [Chrysoc... [more]
gi|831542056|ref|XP_012724942.1|3.813e-4929.69hippocampus abundant transcript 1 protein [Fundulu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna450rna450Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications