EWM26164.1, cds4498 (CDS) Nannochloropsis gaditana

Overview
NameEWM26164.1
Unique Namecds4498
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:781302..781372 -
Alignment locationCM002463.1:780667..781231 -

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Properties
Property NameValue
Protein idEWM26164.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100121g1.10136.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:781302..781372 -
CM002463.1supercontigCM002463.1:780667..781231 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26164.1 vs. NCBI_GenBank
Match: gi|585108160|gb|EWM26164.1| (hypothetical protein Naga_100121g1 [Nannochloropsis gaditana])

HSP 1 Score: 436.032 bits (1120), Expect = 8.283e-155
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 
Query:    1 MLYFRWPRLITLLLLTSWLVWCEGFCHRLIFSTGTRQCCGDRAIPARYFSIIASEQHILTPGAACRVRRESGSNVPTTSAPPATDFPPSSPVELHLLEGDVVEYRITEEQRRKGQLPALDTRTLGIGVVNQFMRIHPLCRRSPGSPELFFDEEQDALEENVNDIVVRVINQVWYQQRCIEDRKINPHGEEAEDMYILEEGLSPGCGPAERF 211
            MLYFRWPRLITLLLLTSWLVWCEGFCHRLIFSTGTRQCCGDRAIPARYFSIIASEQHILTPGAACRVRRESGSNVPTTSAPPATDFPPSSPVELHLLEGDVVEYRITEEQRRKGQLPALDTRTLGIGVVNQFMRIHPLCRRSPGSPELFFDEEQDALEENVNDIVVRVINQVWYQQRCIEDRKINPHGEEAEDMYILEEGLSPGCGPAERF
Sbjct:    1 MLYFRWPRLITLLLLTSWLVWCEGFCHRLIFSTGTRQCCGDRAIPARYFSIIASEQHILTPGAACRVRRESGSNVPTTSAPPATDFPPSSPVELHLLEGDVVEYRITEEQRRKGQLPALDTRTLGIGVVNQFMRIHPLCRRSPGSPELFFDEEQDALEENVNDIVVRVINQVWYQQRCIEDRKINPHGEEAEDMYILEEGLSPGCGPAERF 211
[Close]
BLAST of EWM26164.1 vs. NCBI_GenBank
Match: gi|298713298|emb|CBJ26994.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 67.781 bits (164), Expect = 8.027e-11
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:   93 ELHLLEGDVVEYRITEEQRRKGQLPALDTRTLGIGVVNQFMRIHPLCRRSPGSPELFF-DEEQDALEENVNDI-VVRVINQVWYQQRCIEDRKINPHGEEAEDMYILEEGLSPGC 205
            E  LLE DVVEYR   +     +L +     +G G      ++ PL  R+   P LFF DEE   +  +     +VRV+++V++ QR +EDR  NPHGEEAED ++L EG+ P  
Sbjct:   50 EGSLLELDVVEYRSGPDDESSLELASY----IGEG------KLQPLLTRTESGPNLFFHDEEAQPVSLSGGSCRIVRVLDEVYFSQRIVEDRVKNPHGEEAEDCFLL-EGIDPAT 153
The following BLAST results are available for this feature:
BLAST of EWM26164.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585108160|gb|EWM26164.1|8.283e-155100.00hypothetical protein Naga_100121g1 [Nannochloropsi... [more]
gi|298713298|emb|CBJ26994.1|8.027e-1139.13expressed unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4509rna4509Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications