EWM26176.1, cds4486 (CDS) Nannochloropsis gaditana

Overview
NameEWM26176.1
Unique Namecds4486
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:745820..745829 +
Alignment locationCM002463.1:746060..747663 +
Alignment locationCM002463.1:747725..747907 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26176.1
ProductPolyprenyl synthetase
Orig transcript idgnl|cribi|Naga_100072g15.8009.mrna
GeneSPPS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:745820..745829 +
CM002463.1supercontigCM002463.1:746060..747663 +
CM002463.1supercontigCM002463.1:747725..747907 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017446Polyprenyl_synth-rel
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Homology
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|585108173|gb|EWM26176.1| (Polyprenyl synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1228.77 bits (3178), Expect = 0.000e+0
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0
Query:    1 MVARFGLSGPRSYQHSKIEGRSIESATSSPMTTTSIRRHRISTASLLAMETNSTRDSLRTQQQDQPHHAGRRRRTSGSYAAWGLASAATAVMYFATVAHGFVTPLTSAPFRQAEAGNGLVSGSFAGKRSVCAGQSATSLGAGVLSKLDFKPAVDVYAKFPEPPKTAGTSTGTSTLSHEEVTLLTTAASQPSIVMSLDGPAPNDVDPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTEGVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVRIARHTTTSVYFYRATAEIFFFSFFRRAELAKLWRVREGGGEGLDDVTCETATRRRW 598
            MVARFGLSGPRSYQHSKIEGRSIESATSSPMTTTSIRRHRISTASLLAMETNSTRDSLRTQQQDQPHHAGRRRRTSGSYAAWGLASAATAVMYFATVAHGFVTPLTSAPFRQAEAGNGLVSGSFAGKRSVCAGQSATSLGAGVLSKLDFKPAVDVYAKFPEPPKTAGTSTGTSTLSHEEVTLLTTAASQPSIVMSLDGPAPNDVDPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTEGVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVRIARHTTTSVYFYRATAEIFFFSFFRRAELAKLWRVREGGGEGLDDVTCETATRRRW
Sbjct:    1 MVARFGLSGPRSYQHSKIEGRSIESATSSPMTTTSIRRHRISTASLLAMETNSTRDSLRTQQQDQPHHAGRRRRTSGSYAAWGLASAATAVMYFATVAHGFVTPLTSAPFRQAEAGNGLVSGSFAGKRSVCAGQSATSLGAGVLSKLDFKPAVDVYAKFPEPPKTAGTSTGTSTLSHEEVTLLTTAASQPSIVMSLDGPAPNDVDPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTEGVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVRIARHTTTSVYFYRATAEIFFFSFFRRAELAKLWRVREGGGEGLDDVTCETATRRRW 598          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|298707167|emb|CBJ29940.1| (solanesyl diphosphate synthase-like protein [Ectocarpus siliculosus])

HSP 1 Score: 457.218 bits (1175), Expect = 8.534e-153
Identity = 235/403 (58.31%), Postives = 284/403 (70.47%), Query Frame = 0
Query:  141 AGVLSKLDFKPAVDVYAKFPEPPKTAGTSTGTSTLSHEEVTLLTTAASQPSIVMSLDGPAPNDVDPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPV-VDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTEGVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            A  L  LD KPA  ++   P PP T  T+  +  +  +                     AP DVDPF L  KDL+PF+D+IKELVE+E+PVL+ AAKHFFEKRHGKRFRPTI  LM+ A       D+        PM    +   Y RQ QL QITEMIHVASLIHDDVLDEA+ RRG +AVHKLYSNKVAVLAGDYLLARASVLLARL +VQVVEIMA ALD+LVQGEIMQ K   + LLD+  YLRKSYYKTASLI N+C S A+LGG+ + S    AAE+YGYH+GLA+Q++DD+LD  G ADVLGKPAMADM+LGLATAPILYAAE   E+K ++KRRFK++GD E+  K V+  + V R+ +LA +HAQRAVDA+   PPSEA++GL+ + H+   R
Sbjct:  105 AATLGNLDLKPAYRLFDTVPPPPSTDATARKSDDIDLDVDGD-----------------APYDVDPFKLASKDLSPFTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALAT-----CDK--------PMEAHRESEEYTRQGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLGDVQVVEIMATALDSLVQGEIMQLKMDPEKLLDISLYLRKSYYKTASLITNACKSCAILGGHEFDSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGKPAMADMSLGLATAPILYAAENAPEIKKIVKRRFKKEGDKEKALKAVLDGDAVARSRELARWHAQRAVDAVLRLPPSEARNGLVNICHIVLTR 477          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|551668555|ref|XP_005837037.1| (geranylgeranyl pyrophosphate synthase [Guillardia theta CCMP2712] >gi|428181192|gb|EKX50057.1| geranylgeranyl pyrophosphate synthase [Guillardia theta CCMP2712])

HSP 1 Score: 444.506 bits (1142), Expect = 5.102e-149
Identity = 216/338 (63.91%), Postives = 270/338 (79.88%), Query Frame = 0
Query:  205 DPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTEGVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            DPFALVK++L+PFSDSIK++V+T++P+L+ AAKHFF +R GKRFRPTI MLM++A        R          PV     Y++Q++L QITEMIHVASLIHDDVLDEADTRRG  +VHKLYSNKVAV+AGDYLLARASV+LARLEN +V EIM+ AL++LVQGEIMQ K+   DLLD+  YLRKSY+KTASLIC++C S A+L G+   S    AAE+YGYHLGL+YQ+IDDVLDFTG +DVLGKPAMAD++LGL+TAP+LYAAE   ELKP+I+R+FK++GDVE+T + V+ ++G+ERA  LA+FHAQRAV+AI   P SE ++ LI LAHM   R
Sbjct:   73 DPFALVKEELSPFSDSIKDVVDTDHPILSEAAKHFFAERQGKRFRPTIVMLMAKATAPNPKEHRS--------GPV-----YEKQAELGQITEMIHVASLIHDDVLDEADTRRGGESVHKLYSNKVAVIAGDYLLARASVVLARLENTEVTEIMSTALESLVQGEIMQIKTGEDDLLDMMTYLRKSYHKTASLICDACKSCAILAGHAADSEEANAAEEYGYHLGLSYQIIDDVLDFTGASDVLGKPAMADVSLGLSTAPVLYAAESIAELKPMIRRKFKQEGDVEKTLRFVLQSDGIERAKSLALFHAQRAVNAICRLPESEERNALISLAHMVLSR 397          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|397635108|gb|EJK71722.1| (hypothetical protein THAOC_06810 [Thalassiosira oceanica])

HSP 1 Score: 427.557 bits (1098), Expect = 1.836e-141
Identity = 214/352 (60.80%), Postives = 265/352 (75.28%), Query Frame = 0
Query:  205 DPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAG-------------GAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTE-GVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            DPF +V+K+L PFSDSIKELV T+ P+L+ AAKHFFEKRHGKRFRPTI  LM++AV A              GA   ++ G   T     D   +++Q QL QI EMIHVASLIHDDVLDEADTRRG  AVHKLYSNKVAVLAGDYLLARASVLLARLEN  VV+IMA AL++LV GEIMQ KSS ++LL +  YLRKSYYKTASLIC +C S ALLGG+ YGS    A E++G+H+GLA+Q+ DD+LDFT  AD+LGKPA+ADM+LGL+TAPILYAA+E   L+PL+KRRFKE+ D +   + +  ++  +++A +LA FHAQRAVDA+   P SEA+D L++L ++   R
Sbjct:  111 DPFKIVEKELQPFSDSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKAVAACPPETMRGDRWEDTGASRINLEGGAVTTANHKDSDVWRKQGQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKSSPEELLQMTSYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFTAAADILGKPALADMSLGLSTAPILYAAQEFPHLEPLVKRRFKEKNDKQTALEALYKSDTAMDKAKELAKFHAQRAVDALLRLPQSEARDALLRLTYIVITR 462          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|224001362|ref|XP_002290353.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 417.927 bits (1073), Expect = 7.564e-140
Identity = 205/335 (61.19%), Postives = 257/335 (76.72%), Query Frame = 0
Query:  209 LVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTE-GVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            +V+K+L PF+DSIKELV T+ P+L+ AAKHFFEKRHGKRFRPTI  LM++A   G  +                   +++Q+QL QI EMIHVASLIHDDVLDEADTRRG  AVHKLYSNKVAVLAGDYLLARASVLLARLEN  VV+IMA AL++LV GEIMQ K+S ++LL +  YL+KSYYKTASLIC +C S ALLGG+ YGS    A E++G+H+GLA+Q+ DD+LDFT  AD+LGKPA+ADM+LGL+TAPILYAAEE   L+PL+KRRFKE+GD +   + +  +E  +++A +LA FHAQRAVDA+   P SEA+D L++L ++   R
Sbjct:    1 MVEKELQPFADSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKANHQGSEV-------------------WRKQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKASPEELLQMQSYLKKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFTAAADILGKPALADMSLGLSTAPILYAAEEYPHLRPLVKRRFKEKGDKQTALEALYKSEVAMDKAKRLAEFHAQRAVDALLRLPQSEARDALLRLTYVVITR 316          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|1072235053|gb|OEU19782.1| (solanesyl diphosphate synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 416.001 bits (1068), Expect = 5.118e-139
Identity = 210/335 (62.69%), Postives = 253/335 (75.52%), Query Frame = 0
Query:  209 LVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTE-GVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            +V+++L PFSDSIKELV T+ P+L+ AAKHFFEKRHGKRFRPTI  LM++AV A            A P  +       RQ+QL QI EMIHVASLIHDDVLDEADTRRG  AVHKLYSNKVAVLAGDYLLARASVLLARLEN  VV+IMA AL++LV GEIMQ K+ A+ LL++  YLRKSYYKTASLIC +C S ALLGG+ YGS    A E++GYHLGLAYQ+ DD+LDFT  A VLGKPA+ADM LGL+TAPILYAAEE   LKP+I RRFK +GD ++  + +  ++  +++A  LA FHAQRAVDA+   P +E++D L++L H    R
Sbjct:    1 MVEQELKPFSDSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIIQLMAKAVTA------------AVPETI-------RQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKAPAESLLEMESYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGYHLGLAYQIQDDILDFTAAASVLGKPALADMDLGLSTAPILYAAEEFPHLKPMIMRRFKNKGDKQKALEALYSSDIAMDKAKALANFHAQRAVDALLRLPQTESRDALVRLTHTVVTR 316          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|1210511484|dbj|GAX29298.1| (geranyl diphosphate synthase [Fistulifera solaris])

HSP 1 Score: 414.075 bits (1063), Expect = 1.866e-136
Identity = 212/350 (60.57%), Postives = 262/350 (74.86%), Query Frame = 0
Query:  205 DPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAG----GAIDRDVGGAMATPM-PVVDPLRYQ------RQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTE-GVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            DPF +V+K+L PFSDSIKELV T+ P+L+ AAKHFFEKRHGKRFRPTI  L+++AV A     G    +V  + A+ +   V P  +Q      RQ+QL QI EMIHVASLIHDDVLDEADTRRG  AVHKLYSNKVAVLAGDYLLARASVLLARLEN  VV+IMA AL++LV GEIMQ KS  + LL++  YLRKSYYKTASLIC +C S ALLGG+ Y S    A E++G+HLGLAYQ+ DD+LDFT  A VLGKPA+ADM LGL+TAPILYAA+E   L+ L+ RRFK++GD +   + +  ++  +++A  LA FHAQRA+DA+   P S+++D LI+L H+   R
Sbjct:   98 DPFKMVEKELQPFSDSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLVAKAVAAATPDTGVPSGNVQWSGASTLAEAVTPENHQGSDVWRRQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKSPPETLLEMETYLRKSYYKTASLICYACRSTALLGGHVYDSAAATACEEFGFHLGLAYQIQDDILDFTAAASVLGKPALADMDLGLSTAPILYAAQETPSLRALVMRRFKKKGDKQAALEALYKSDTAMDKARALARFHAQRAIDALLRLPQSDSRDALIRLTHIVITR 447          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|219125696|ref|XP_002183110.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405385|gb|EEC45328.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 406.757 bits (1044), Expect = 1.329e-135
Identity = 205/337 (60.83%), Postives = 247/337 (73.29%), Query Frame = 0
Query:  207 FALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTE-GVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVR 542
            F LV+K+L PFSDSIKELV ++ P+L+ AAKHFFEKRHGKRFRPTI  LM++                               +QL QI EMIHVASLIHDDVLDEADTRRG  AVHKLYSNKVAVLAGDYLLARASVLLARLEN  VV++MA AL++LV GEIMQ KS A+ LL++  YLRKSYYKTASLIC +C S ALLGG+ YGS    A E++G+HLGLAYQ+ DD+LDFT  A VLGKPA+ADM LGL+TAPILYAA+E   LKPL+ RRFKE+GD +   + +  ++  +++A  LA FHAQRAVDA+   PPSE+++ L++L H    R
Sbjct:    1 FKLVEKELQPFSDSIKELVSSDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKT------------------------------AQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQVMATALESLVAGEIMQLKSPAESLLEMESYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHLGLAYQIQDDILDFTAAATVLGKPALADMDLGLSTAPILYAAQEFPHLKPLVMRRFKEKGDKQAALEALYKSDVAMDKARALARFHAQRAVDALLRLPPSESRNALVRLTHAVITR 307          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|1210531885|dbj|GAX09572.1| (geranyl diphosphate synthase [Fistulifera solaris])

HSP 1 Score: 391.734 bits (1005), Expect = 6.023e-128
Identity = 205/332 (61.75%), Postives = 243/332 (73.19%), Query Frame = 0
Query:  205 DPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQAG--------GAIDRDVGGAMATPMPVVDPLRYQ------RQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGD----VEQTYKLVMGTEGVERAYQLAVFHAQRAVD 518
            DPF +V+K+L PFSDSIKELV T+ P+L+ AAKHFFEKRHGKRFRPTI  L+++AV A         G +       +A P   V P  +Q      RQ+QL QI EMIHVASLIHDDVLDEADTRRG  AVHKLYSNKVAVLAGDYLLARASVLLARLEN  VV+IMA AL++LV GEIMQ KS  + LL++  YLRKSYYKTASLIC +C S ALLGG+ Y S    A E++G+HLGLAYQ+ DD+LDFT  A VLGKPA+ADM LGL+TAPILYAA+E   L+ L+ RRFK++GD    +E  YK V     +++A  LA FHAQ + D
Sbjct:   98 DPFKMVEKELQPFSDSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLVAKAVAAATPDTGVPSGNVQWSGASTLAEP---VTPENHQGSDVWRRQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKSPPETLLEMETYLRKSYYKTASLICYACRSTALLGGHVYDSAAATACEEFGFHLGLAYQIQDDILDFTAAASVLGKPALADMDLGLSTAPILYAAQETPSLRALVMRRFKKKGDKQAALEALYKSVT---AMDKARALARFHAQVSFD 423          
BLAST of EWM26176.1 vs. NCBI_GenBank
Match: gi|873227867|emb|CEM17488.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 391.734 bits (1005), Expect = 9.234e-128
Identity = 200/346 (57.80%), Postives = 253/346 (73.12%), Query Frame = 0
Query:  199 PAPNDVDPFALVKKDLAPFSDSIKELVETENPVLTAAAKHFFEKRHGKRFRPTIAMLMSRAVQ-AGGAIDRDVGGAMATPMPVVDPLRYQRQSQLAQITEMIHVASLIHDDVLDEADTRRGDLAVHKLYSNKVAVLAGDYLLARASVLLARLENVQVVEIMANALDALVQGEIMQAKSSAKDLLDLGHYLRKSYYKTASLICNSCCSAALLGGYTYGSPTTVAAEKYGYHLGLAYQVIDDVLDFTGTADVLGKPAMADMTLGLATAPILYAAEEKKELKPLIKRRFKEQGDVEQTYKLVMGTEGVERAYQLAVFHAQRAVDAIASFPPSEAKDGLIKLAHMAPVRI 543
            P P+   PF  VK +L   +D ++ELV+T++PVL  AA HFF    GK+FRPTI MLMS+AV+  G   D DV               Y+RQ +L QITEMIH ASLIHDDVLDEA+TRRG  AVHKL+SNKVAVLAGD+LLARASVLLARL NV+VVE+MA ALDALV GE+MQAK+   DL     Y+RKSY+KTASLI  SC SAALL GY   S   +AAEK+GYHLGLA+Q++DD+LDFT +AD+LGKPA++D+  G ATAPILYAAEE  E+ PLI+RRFK++GDV+  +KL+  + G+E+  +LA++HA +AV+ ++SFP + A   L++L      RI
Sbjct:  111 PGPS---PFDQVKDELDMLADDVRELVDTDHPVLKLAASHFFSLASGKKFRPTIVMLMSQAVERIGEPRDEDV---------------YERQRRLGQITEMIHTASLIHDDVLDEAETRRGSDAVHKLFSNKVAVLAGDFLLARASVLLARLGNVEVVEVMATALDALVTGEVMQAKAQPTDLESFDWYVRKSYFKTASLIACSCKSAALLSGYGQESEEVIAAEKFGYHLGLAFQIVDDLLDFTQSADLLGKPALSDLKNGHATAPILYAAEEYPEMGPLIRRRFKDKGDVQTAHKLLKQSSGLEKTRELALWHASQAVEWLSSFPDTPANQALVRLTTQVITRI 438          
The following BLAST results are available for this feature:
BLAST of EWM26176.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108173|gb|EWM26176.1|0.000e+0100.00Polyprenyl synthetase [Nannochloropsis gaditana][more]
gi|298707167|emb|CBJ29940.1|8.534e-15358.31solanesyl diphosphate synthase-like protein [Ectoc... [more]
gi|551668555|ref|XP_005837037.1|5.102e-14963.91geranylgeranyl pyrophosphate synthase [Guillardia ... [more]
gi|397635108|gb|EJK71722.1|1.836e-14160.80hypothetical protein THAOC_06810 [Thalassiosira oc... [more]
gi|224001362|ref|XP_002290353.1|7.564e-14061.19predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072235053|gb|OEU19782.1|5.118e-13962.69solanesyl diphosphate synthase [Fragilariopsis cyl... [more]
gi|1210511484|dbj|GAX29298.1|1.866e-13660.57geranyl diphosphate synthase [Fistulifera solaris][more]
gi|219125696|ref|XP_002183110.1|1.329e-13560.83predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1210531885|dbj|GAX09572.1|6.023e-12861.75geranyl diphosphate synthase [Fistulifera solaris][more]
gi|873227867|emb|CEM17488.1|9.234e-12857.80unnamed protein product [Vitrella brassicaformis C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4497rna4497Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications