EWM26230.1, cds4468 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26230.1 vs. NCBI_GenBank
Match: gi|585108229|gb|EWM26230.1| (hypothetical protein Naga_100025g10 [Nannochloropsis gaditana]) HSP 1 Score: 1207.59 bits (3123), Expect = 0.000e+0 Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0
Query: 1 MTAGSSTQHFHRCFGGKRGAAPGFLAYGNFSSIARLTGCLLVRTLFDTSMTTNKHQKGKHKRHRSQSPIFTSDASTPFSTCASAPSSDRAKTFQDPSDYPHGGGSDSDVKTYADMSGSSKRGVTILPDSAADGISGGKDRAGAKDGKSFPQGRRSSIGQAPAPAIHLHECIAGLFEDGEHSIGRSYTEAALQHWRSLDTERKGQLLSGITREDVYECLRDVEITTQFPVEGEPREETGKAVAQQFLHAMEVQDGVFRFPSAPSLEFVGFFASLERNLLMSMEEENLRNQAAMVGCLLLWRQSWWMYAIIPVVLLLLLENAWCRKARSCLWELLSQSFLRRRRWQPYVRWKVEAYSVAALSIAMASQSKWCYKVTLLFIGLVLFLDYRSASSTSLYADSKALVTVRQLLLHLQKFLLLYLAYHSYVALFTVCLSYFPTFTVLLLSSVYFLAGLGISLFWQIVHDKLLSYFPRWRDSLDAWWQDGRDGLNRAMVLALIAVTVIPYTFYSSWNTIPAWRGTFWRFLSVMVVTNLASVEDLKRTYNAGKESARNVMYRMKRGLKRWSAFSRDGNKAPKTCRKAGKMD 583
MTAGSSTQHFHRCFGGKRGAAPGFLAYGNFSSIARLTGCLLVRTLFDTSMTTNKHQKGKHKRHRSQSPIFTSDASTPFSTCASAPSSDRAKTFQDPSDYPHGGGSDSDVKTYADMSGSSKRGVTILPDSAADGISGGKDRAGAKDGKSFPQGRRSSIGQAPAPAIHLHECIAGLFEDGEHSIGRSYTEAALQHWRSLDTERKGQLLSGITREDVYECLRDVEITTQFPVEGEPREETGKAVAQQFLHAMEVQDGVFRFPSAPSLEFVGFFASLERNLLMSMEEENLRNQAAMVGCLLLWRQSWWMYAIIPVVLLLLLENAWCRKARSCLWELLSQSFLRRRRWQPYVRWKVEAYSVAALSIAMASQSKWCYKVTLLFIGLVLFLDYRSASSTSLYADSKALVTVRQLLLHLQKFLLLYLAYHSYVALFTVCLSYFPTFTVLLLSSVYFLAGLGISLFWQIVHDKLLSYFPRWRDSLDAWWQDGRDGLNRAMVLALIAVTVIPYTFYSSWNTIPAWRGTFWRFLSVMVVTNLASVEDLKRTYNAGKESARNVMYRMKRGLKRWSAFSRDGNKAPKTCRKAGKMD
Sbjct: 1 MTAGSSTQHFHRCFGGKRGAAPGFLAYGNFSSIARLTGCLLVRTLFDTSMTTNKHQKGKHKRHRSQSPIFTSDASTPFSTCASAPSSDRAKTFQDPSDYPHGGGSDSDVKTYADMSGSSKRGVTILPDSAADGISGGKDRAGAKDGKSFPQGRRSSIGQAPAPAIHLHECIAGLFEDGEHSIGRSYTEAALQHWRSLDTERKGQLLSGITREDVYECLRDVEITTQFPVEGEPREETGKAVAQQFLHAMEVQDGVFRFPSAPSLEFVGFFASLERNLLMSMEEENLRNQAAMVGCLLLWRQSWWMYAIIPVVLLLLLENAWCRKARSCLWELLSQSFLRRRRWQPYVRWKVEAYSVAALSIAMASQSKWCYKVTLLFIGLVLFLDYRSASSTSLYADSKALVTVRQLLLHLQKFLLLYLAYHSYVALFTVCLSYFPTFTVLLLSSVYFLAGLGISLFWQIVHDKLLSYFPRWRDSLDAWWQDGRDGLNRAMVLALIAVTVIPYTFYSSWNTIPAWRGTFWRFLSVMVVTNLASVEDLKRTYNAGKESARNVMYRMKRGLKRWSAFSRDGNKAPKTCRKAGKMD 583
BLAST of EWM26230.1 vs. NCBI_GenBank
Match: gi|669141594|ref|XP_008606359.1| (hypothetical protein SDRG_02542 [Saprolegnia diclina VS20] >gi|530741643|gb|EQC39885.1| hypothetical protein SDRG_02542 [Saprolegnia diclina VS20]) HSP 1 Score: 85.8853 bits (211), Expect = 3.066e-14 Identity = 99/396 (25.00%), Postives = 169/396 (42.68%), Query Frame = 0
Query: 147 KSFPQGRRSSIGQAPAPAIHLHECIAGLFEDGEHSIGRSYTEAALQHWRSLDTERKGQLLSGITREDVYECLRDVEITTQFPVEGEP-----REETGKAVAQQFLHAMEVQDGVFRFPSAPSLEFVGFFASLERNLLMSMEEENLRNQAAMVGCLLLWRQSWWMYAIIPVVLLLLLENAWCRKARSCLWELLSQSFLRRRRWQPYVRWKVEAYSVAALSIAMASQSKWCYKVTLLFIGLVLFLDYRSASSTSLYADS----KALVTVRQLLLHLQKFLLLYLAYHSYVALFTVCLSYFPTFTVLLLSSVYFLAGLGISLFWQIVHDKLLSYF-PRWRDSLDAWWQDGRDGLNRAMVLALIAVTVIPYTFYSSWNTIPAWRGTFWRFLSVMVVTNLA 532
K P GRR + AP +G E G + IGR T+ + HWR L ++ K L+ G+ +++ + +R V Q+P P T V FLHA+E DG S+E +G +LER LL ++ +++ + A+ L+W SW + +L+L C R+ L FL +V W ++ ++ + S + + + +VL L + ++ + YAD AL + L L K +L+Y + SY +L V +F T L L+SV F LG+++ ++ L P + ++ W + R A+ L+ V V Y++W+ W F F+ ++ V L+
Sbjct: 8 KRRPTGRRPEKASSDAP-----PPPSGHAEMG-YEIGRGRTDV-VGHWRDLTSDEKCDLM-GLDEDEIDDAMRLV--VQQYPQLDAPLPSSVDPATTAMVQAMFLHALETCDGKLILEHV-SIETIGVLVALERKLLYAVIGKDMHRKCAVTVLYLVWTSSWPYLGVAGYLLVLFSNLGPCTWLRNTTCAYLDAFFLHGPD-PLHVEWY---FNSYLTALLLLYTSHDAHVAVYIILAIVLALPFGVSALKNSYADGADDHSALDKITSALSLLNKLILVYYCWSSYSSLLMVAALFFDT-AALSLASVSF---LGVAVVLELAGRAFLRIVPPAYVEAYTEWKEQSR---WHALGAGLVPVAVAAIVLYATWD----WTSMFGGFVRLVTVLALS 377
BLAST of EWM26230.1 vs. NCBI_GenBank
Match: gi|813181800|ref|XP_012206158.1| (hypothetical protein SPRG_10015 [Saprolegnia parasitica CBS 223.65] >gi|641529009|gb|KDO23207.1| hypothetical protein SPRG_10015 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 72.7886 bits (177), Expect = 5.797e-10 Identity = 98/400 (24.50%), Postives = 168/400 (42.00%), Query Frame = 0
Query: 147 KSFPQGRR--SSIGQAPAPAIHLHECIAGLFEDGEHSIGRSYTEAALQHWRSLDTERKGQLLSGITREDVYECLRDVEITTQFP-----VEGEPREETGKAVAQQFLHAMEVQDGVFRFPSAPSLEFVGFFASLERNLLMSMEEENLRNQAAMVGCLLLWRQSWWMYAIIPVVLLLLLENAWCRKARSCLWELLSQSFLRRRRWQPYVRWKVEAYSVAALSIAMASQSKWCYKVTLLFIGLVLFLDYRSASSTSLYADS----KALVTVRQLLLHLQKFLLLYLAYHSYVALFTVCLSYFPTFTVLLLSSVYFLAGLGISLFWQIVHDKLLSYFPR-WRDSLDAWWQDGRDGLNRAMVLALIAVTVIPYTFYSSWNTIPAWRGTFWRFLSVMVVTNLASV 534
K P GRR + + P P +G E G + IGR T+ + HWR L ++ K L+ G+ ++ + V Q+P + T + V FLHA+E DG S+E +G +LE LL ++ +++ + ++ L+W SW + +L+L C R+ E L FL+ + W +Y A L + + + + + L +VL L + ++ YAD AL + L K +L+Y + SY +L V +F T L L+S+ F LG+++ ++ LL P + ++ +W + A+ L+ V V Y +W+ W F FL ++ V L+ V
Sbjct: 8 KRRPTGRRPEKAGNETPPPP-------SGSAEMG-YEIGRGRTDV-VGHWRDLTSDAKCDLM-GLDDAEIAAAMHLV--VQQYPQLDATLPSSVDAATTEMVQAMFLHALETCDGKLILEHV-SIETLGVLFALEGKLLYAVVGKDMHRKCSIAALYLVWTSSWPYLGMGAYLLVLFSNLGPCTWLRNTSCEYLDAFFLQGPD-PLHAEWYFNSYLTALLLLYTSHDAHFTVYIIL---AIVLALPFGVSALQHSYADGVDDHSALEKITAALSFFNKLILVYYCWSSYSSLLMVAALFFDT-AALSLASISF---LGVAVVVELAGRGLLRIVPTAYVEAYTSWKARSQ---WHALGAGLVPVAVAGIVLYGTWD----WTSMFGGFLRLVTVLALSQV 379
BLAST of EWM26230.1 vs. NCBI_GenBank
Match: gi|813193951|ref|XP_012208416.1| (hypothetical protein SPRG_14068 [Saprolegnia parasitica CBS 223.65] >gi|641526478|gb|KDO20838.1| hypothetical protein SPRG_14068 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 71.633 bits (174), Expect = 1.136e-9 Identity = 87/364 (23.90%), Postives = 154/364 (42.31%), Query Frame = 0
Query: 180 HSIGRSYTEAALQHWRSLDTERKGQLLSGITREDVYECLRDVEITTQFP-----VEGEPREETGKAVAQQFLHAMEVQDGVFRFPSAPSLEFVGFFASLERNLLMSMEEENLRNQAAMVGCLLLWRQSWWMYAIIPVVLLLLLENAWCRKARSCLWELLSQSFLRRRRWQPYVRWKVEAYSVAALSIAMASQSKWCYKVTLLFIGLVLFLDYRSASSTSLYADS----KALVTVRQLLLHLQKFLLLYLAYHSYVALFTVCLSYFPTFTVLLLSSVYFLAGLGISLFWQIVHDKLLSYFPRWRDSLDAWWQDGRDGLNRAMVLALIAVTVIPYTFYSSWNTIPAWRGTFWRFLSVMVVTNLASV 534
+ IGR T+ + HWR L ++ K L+ G+ ++ + + + Q+P + T V FLHA+E DG S+E +G +LER LL ++ +++ + ++ L+W SW + +L+L C R+ E L FL+ + W +Y A L + + + + + L +VL L + ++ YAD AL + L + K +L+Y + SY +L V +F T + L+SV F LG+++ ++ LL P W++ A+ L+ V V Y +W+ W F F+ ++ V L+ V
Sbjct: 3 YEIGRGRTDV-VGHWRDLTSDAKCDLM-GLDDAEIADAMH--LVVQQYPQLDATLPSSVDAATTAMVQAMFLHALETCDGKLILEHV-SIETIGVLFALERKLLYAVVGKDMHRKCSIAVLYLVWTSSWPYLGMGAYLLVLFSNLGPCTWLRNTSVEYLDAFFLQGPD-PLHAEWYFNSYLTALLLLYTSHDAHFTVYIIL---AIVLALPFGVSALQHSYADGVDDHSALEKITSALSFINKLILVYYCWSSYTSLLMVAALFFDT-AAISLASVSF---LGVAVVVELAGCGLLRIVPTAYVEAYTLWKERSQW--HALGAGLVPVAVAGIVLYGTWD----WTSMFGGFVRLVTVLALSQV 347 The following BLAST results are available for this feature:
BLAST of EWM26230.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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