EWM26239.1, cds4463 (CDS) Nannochloropsis gaditana

Overview
NameEWM26239.1
Unique Namecds4463
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:678127..678984 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26239.1
ProductProtein of unknown function DUF1997
Orig transcript idgnl|cribi|Naga_100025g15.7530.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:678127..678984 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018971DUF1997
Homology
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|585108238|gb|EWM26239.1| (Protein of unknown function DUF1997 [Nannochloropsis gaditana])

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query:    1 MLAAFPGAMLGALTISILLLSSVADAFRLASPFTVKAARVVTAADMDRWRSPLLHRVRSSRGNSEASSPKEFFRLARGKMEFGTVDEVELLLWDEPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASALEAG 285
            MLAAFPGAMLGALTISILLLSSVADAFRLASPFTVKAARVVTAADMDRWRSPLLHRVRSSRGNSEASSPKEFFRLARGKMEFGTVDEVELLLWDEPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASALEAG
Sbjct:    1 MLAAFPGAMLGALTISILLLSSVADAFRLASPFTVKAARVVTAADMDRWRSPLLHRVRSSRGNSEASSPKEFFRLARGKMEFGTVDEVELLLWDEPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASALEAG 285          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|298707807|emb|CBJ30238.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 108.997 bits (271), Expect = 5.574e-25
Identity = 69/220 (31.36%), Postives = 118/220 (53.64%), Query Frame = 0
Query:   64 SEASSPKEFFRLARGKM-EFGTVDEVELLLWDEP-ALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRL-TAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAH--VPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWS 278
            ++A    E F+L  G M EFG+   VE  +   P   +  Y++E P R++ A W+ + +      VFR+  +  SF+ +S+  S+D++L TA       E+G        +  +S+G+S++ + ++LGQ F ++  +++ GKLR    V   R    K     RL G+V     G++P LLS TP P+++SAA+ IN +++ Y    FV  +A D+ +WS
Sbjct:   15 TKAEKTSEQFKLKDGGMVEFGSGQRVEASISGAPLESMLEYISE-PSRIVYACWEHKDIMDMGDGVFRMAFRGQSFLSISIDMSVDIQLWTA-------EDGT-------IQCKSVGYSVDDMAKLLGQEFVDTFFLELEGKLRVEETVTKVRALSLKN---TRLSGDVAVTIGGKMPGLLSATPEPLVKSAALGINNKVLEYVSNTFVSTVAGDYRKWS 216          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|1180104300|ref|WP_083624028.1| (DUF1997 domain-containing protein [Planktothrix serta] >gi|1108764350|emb|CUR20253.1| conserved hypothetical protein [Planktothrix serta PCC 8927])

HSP 1 Score: 85.8853 bits (211), Expect = 1.251e-16
Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASAL 282
            EP LI  YL + P R++ A  D   +D    D++RL  +P+ F+  +LQP++D++L              +S G +L+++S+G  + G+E I  QRF+    +++ GKL            + +G   L G+       +LP  L LTP+P+LE+    + + ++   K + V NL  D++ WSA  L
Sbjct:   17 EPTLIHHYLRQ-PKRLVKALVDPTRLDHLGEDIYRLKMRPLEFMMFNLQPTVDLKLWI------------QSDG-ILNLKSVGCEIRGIEYI-NQRFS----LNLVGKLYP---------VELQGMTHLKGQADLAVKVELPPPLWLTPQPILETTGNGLLKSVLMTVKHRLVHNLLSDYSHWSAEQL 176          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|1101223284|gb|OIP71641.1| (hypothetical protein AUK43_05590 [Oscillatoriales cyanobacterium CG2_30_40_61])

HSP 1 Score: 85.5001 bits (210), Expect = 2.104e-16
Identity = 59/190 (31.05%), Postives = 96/190 (50.53%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASALEA 284
            EP+LI  YL + P R++ A  D   +D    D++RL  +P+ F+  SLQP++D++L              +S G  L+++S+G  + G+E I  QRFA    +++ GKL            K +G   L G+       +LP  L LTP+P+LE+    + + ++   + + V NL  D+  WSA  L A
Sbjct:   17 EPSLIHHYLRQ-PKRLVKALVDPTRLDALTEDIYRLKMRPLQFMMFSLQPTVDLKLWI------------QSDG-TLNLKSVGCEIRGIEYI-NQRFA----LNLVGKLYP---------VKLQGITHLKGQADLQVKVELPPPLWLTPQPILETTGNGLLKSVLMTVRHRLVHNLLSDYAHWSAEQLGA 178          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|652400015|ref|WP_026795816.1| (MULTISPECIES: hypothetical protein [Planktothrix])

HSP 1 Score: 83.1889 bits (204), Expect = 1.175e-15
Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASAL 282
            EP LI  YL + P R++ A  D   +D    D++RL  +P+ F+  SLQP++D++L               S G  L+++S+G  + G+E I  QRF+    +D+ GKL            + +G   L G+       +LP  L LTP+P+LE+    + + ++   + + V NL  D+  WSA  L
Sbjct:   17 EPTLIHHYLRQ-PKRLVKAIVDPTRLDALTEDIYRLKMRPLQFMMFSLQPTVDLKLWI------------HSDG-TLNLKSVGCEIRGIEYI-NQRFS----LDLVGKLYP---------VELQGITHLKGQADLKVKVELPPPLWLTPQPILETTGNGLLKSVLMTVRHRLVHNLLSDYAHWSAEQL 176          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|1160832150|ref|WP_079677948.1| (DUF1997 domain-containing protein [Planktothrix sp. PCC 11201] >gi|1152218751|emb|SKB11809.1| conserved hypothetical protein [Planktothrix sp. PCC 11201])

HSP 1 Score: 82.8037 bits (203), Expect = 1.770e-15
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASAL 282
            EP LI  YL + P R++ A  D   +D  A D++RL  +P+ F+  SLQP++D++L              +S G  L+++S+G  + G+E I  QRF+    +++ GKL            + +G   L G+       +LP  L LTP+P+LE+    + + ++   + + V NL  D++ WSA  L
Sbjct:   17 EPNLIHHYLRQ-PKRLVKALVDPTRLDALAEDIYRLKMRPLQFMMFSLQPTVDLKLWI------------QSDG-TLNLKSVGCEIRGIEYI-NQRFS----LNLVGKLYP---------VELQGITYLKGQSDLKVKVELPPPLWLTPQPILETTGNGLLKSVLMTVRHRLVHNLLSDYSHWSAEQL 176          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|754790149|ref|WP_042153762.1| (DUF1997 domain-containing protein [Planktothrix agardhii] >gi|658298406|gb|KEI66801.1| hypothetical protein A19Y_1807 [Planktothrix agardhii NIVA-CYA 126/8] >gi|1108368664|emb|CUM58026.1| conserved protein of unknown function [Planktothrix agardhii])

HSP 1 Score: 82.0333 bits (201), Expect = 2.984e-15
Identity = 56/188 (29.79%), Postives = 93/188 (49.47%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASAL 282
            EP LI  YL + P R++ A  D   +D    D++RL  +P+ F+  SLQP++D++L          +G        L+++S+G  + G+E I  QRF+    +D+ GKL            + +G   L G+       +LP  L LTP+P+LE+    + + ++   + + V NL  D+  WSA  L
Sbjct:   17 EPTLIHHYLRQ-PKRLVKAIVDPTRLDALTEDIYRLKMRPLQFMMFSLQPTVDLKLWI------HSDGT-------LNLKSVGCEIRGIEYI-NQRFS----LDLVGKLYP---------VELQGITYLKGQSDLKVKVELPPPLWLTPQPILETTGNGLLKSVLMTVRHRLVHNLLSDYAHWSAEQL 176          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|652389729|ref|WP_026785577.1| (MULTISPECIES: hypothetical protein [Planktothrix] >gi|1108749994|emb|CUR24865.1| conserved hypothetical protein [Planktothrix rubescens])

HSP 1 Score: 82.0333 bits (201), Expect = 3.340e-15
Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASAL 282
            EP LI  YL + P R++ A  D   +D    D++RL  +P+ F+  SLQP++D++L               S G  L+++S+G  + G+E I  QRF+    +D+ GKL            + +G   L G+       +LP  L LTP+P+LE+    + + ++   + + V NL  D+  WSA  L
Sbjct:   17 EPTLIHHYLRQ-PKRLVKAIVDPTRLDALTEDIYRLKMRPLQFMMFSLQPTVDLKLWI------------HSDG-TLNLKSVGCEIRGIEYI-NQRFS----LDLVGKLYP---------VELQGITYLKGQSDLKVKVELPPPLWLTPQPILETTGNGLLKSVLMTVRHRLVHNLLSDYAHWSAEQL 176          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|1180101033|ref|WP_083620761.1| (DUF1997 domain-containing protein [Planktothrix paucivesiculata] >gi|1108758266|emb|CUR17704.1| conserved hypothetical protein [Planktothrix paucivesiculata PCC 9631])

HSP 1 Score: 81.2629 bits (199), Expect = 5.456e-15
Identity = 58/190 (30.53%), Postives = 94/190 (49.47%), Query Frame = 0
Query:   95 EPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRWSASALEA 284
            EP LI  YL + P R++ A  D   +D    D++RL  +P+ F+  SLQP++D++L              +S G  L+++S+G  + G+E I  QRFA    +++ GKL            + +G   L G+       +LP  L LTP+ +LE+    + + ++   K + V NL  D+  WSA  L A
Sbjct:   17 EPTLIHHYLRQ-PKRLVKALVDPTRLDALTEDIYRLKMRPLQFMMFSLQPTVDLKLWI------------QSDG-TLNLKSVGCEIRGIEYI-NQRFA----LNLVGKLYP---------VELQGITHLKGQADLQVKVELPPPLWLTPQAILETTGNGLLKSVLMTVKHRLVHNLLSDYAHWSAEQLGA 178          
BLAST of EWM26239.1 vs. NCBI_GenBank
Match: gi|1197829082|ref|WP_086764075.1| (DUF1997 domain-containing protein [Nostoc sp. 106C] >gi|1196004127|gb|OUL26326.1| hypothetical protein BV375_21700 [Nostoc sp. 106C])

HSP 1 Score: 80.1073 bits (196), Expect = 1.470e-14
Identity = 57/198 (28.79%), Postives = 100/198 (50.51%), Query Frame = 0
Query:   80 MEFGTVDEVELLLWDEPALIRRYLTESPDRVLLATWDAELVDRRARDVFRLTTKPMSFVHLSLQPSIDVRLTAIPPEAGREEGAPESGGHLLSVESLGHSMNGLEQILGQRFAESLRIDVTGKLRAHVPPARPGDSKGRGPVRLVGEVVFVTSGQLPSLLSLTPRPVLESAAIAINRRIMSYAKGKFVKNLAKDFNRW 277
            + F     VE+ +  +P  I+ YL + P R++ A  D   + + + +VFRL  +P+SF+ LS+QP++D+R+ A            ES G  ++++S+G  + G E I  QRFA +L+ +++  L           S G    RL G+       +LP   S TP+P+LE+    + + ++   K + +  L  D+ RW
Sbjct:    3 IRFTASQSVEIAVPKQPIPIQHYLRQ-PQRLVNALVDTNRIQQLSEEVFRLKMRPLSFMSLSIQPTVDMRVWA------------ESNGT-INLQSVGCEILGFEYI-NQRFALNLKGNLSPSLH----------STG---TRLQGKADLEVQVELPPPFSFTPKPILEATGNGLLKSVLLTVKQRLLHQLLADYRRW 172          
The following BLAST results are available for this feature:
BLAST of EWM26239.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108238|gb|EWM26239.1|0.000e+0100.00Protein of unknown function DUF1997 [Nannochlorops... [more]
gi|298707807|emb|CBJ30238.1|5.574e-2531.36conserved unknown protein [Ectocarpus siliculosus][more]
gi|1180104300|ref|WP_083624028.1|1.251e-1629.79DUF1997 domain-containing protein [Planktothrix se... [more]
gi|1101223284|gb|OIP71641.1|2.104e-1631.05hypothetical protein AUK43_05590 [Oscillatoriales ... [more]
gi|652400015|ref|WP_026795816.1|1.175e-1530.32MULTISPECIES: hypothetical protein [Planktothrix][more]
gi|1160832150|ref|WP_079677948.1|1.770e-1530.32DUF1997 domain-containing protein [Planktothrix sp... [more]
gi|754790149|ref|WP_042153762.1|2.984e-1529.79DUF1997 domain-containing protein [Planktothrix ag... [more]
gi|652389729|ref|WP_026785577.1|3.340e-1530.32MULTISPECIES: hypothetical protein [Planktothrix] ... [more]
gi|1180101033|ref|WP_083620761.1|5.456e-1530.53DUF1997 domain-containing protein [Planktothrix pa... [more]
gi|1197829082|ref|WP_086764075.1|1.470e-1428.79DUF1997 domain-containing protein [Nostoc sp. 106C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4474rna4474Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications