EWM26252.1, cds4451 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|585108251|gb|EWM26252.1| (hypothetical protein Naga_100025g27 [Nannochloropsis gaditana]) HSP 1 Score: 431.409 bits (1108), Expect = 6.389e-153 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 Query: 1 MRFSGLFLALLLTCASTALAFVVRPAYQVSQLRRIRGVMTAGLFDGLFLSDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANKNYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKPTMLPQGLDSDGPNSKKGAKGGNKK 211 MRFSGLFLALLLTCASTALAFVVRPAYQVSQLRRIRGVMTAGLFDGLFLSDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANKNYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKPTMLPQGLDSDGPNSKKGAKGGNKK Sbjct: 1 MRFSGLFLALLLTCASTALAFVVRPAYQVSQLRRIRGVMTAGLFDGLFLSDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANKNYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKPTMLPQGLDSDGPNSKKGAKGGNKK 211
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|544210603|ref|XP_005535702.1| (hypothetical protein CYME_CMF025C [Cyanidioschyzon merolae strain 10D] >gi|449016014|dbj|BAM79416.1| hypothetical protein CYME_CMF025C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 92.0485 bits (227), Expect = 1.980e-19 Identity = 67/192 (34.90%), Postives = 91/192 (47.40%), Query Frame = 0 Query: 12 LTCASTALAFVVRPAYQVSQLRRIRGV---MTAGLFDGL--FLSDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRA--------EANKNYKEKFNLSKNGK--QDPAIKWMELRKKGVIGEREKYEQYGE-TNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKP 187 L C A + P + R R + AGLFD D E + A KQ E R R+ ++Q+ +++ RRA E + +E+ N + K +DP I W R+K K YGE RGII+P FG ++D GERFDLRLPYVD+GYVDE A + + FG+ KP Sbjct: 18 LDCRWQARGACLAPGRHWRRAPRTRATSRAVIAGLFDAFKPLFGDGENDRAQNKQLESQREREIAEQQRIMREKLEARRAGRHLEGVAERRQAVQEQLNAKEKPKPGEDPLIAWERQREKERTAGTWKEVGYGEEPKRGIILPWPSFGIPRFDYGERFDLRLPYVDEGYVDEDADIMGKV-----FGRRRKP 204
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|219117269|ref|XP_002179429.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409320|gb|EEC49252.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 87.8113 bits (216), Expect = 6.844e-18 Identity = 71/202 (35.15%), Postives = 97/202 (48.02%), Query Frame = 0 Query: 1 MRFSGLFLALLLTCASTALAFVVRPAYQVSQLRRIRGVMTAGLFDGLFLSDSEKE---EAYQKQQEILRARQNPDKQK-AYFQEVNKRRAEANKNYKEKFNL---SKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNR--GIIIPQVPFGNT-------KYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASK 186 MR+S L + T AFV PA + GLFD S K+ E ++KQQEIL R+ P ++ YF++V +RR +A+ K+ + S + +DP +W + R G I + E QYG+ + GI IP FG K+D G RFDLRLPY D GYVD+ A + I FG G K Sbjct: 1 MRYSSFLLVVAFHVTCTG-AFVT-PANAAKST-----ALPMGLFDDWRAGGSGKDSLDEEWEKQQEILAERRKPKAERDKYFEKVEQRRQQASAKQKDMWAWQTKSYSKGEDPIDEWKKRRADGTISDLEN--QYGDPKKIGGIPIPGASFGVGGEFGVGGKFDNGGRFDLRLPYADQGYVDDDADVMGKISAFFGGGTKKK 193
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|873221004|emb|CEM34457.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 85.8853 bits (211), Expect = 7.310e-17 Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 0 Query: 51 DSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANK-------NYKEKF-NLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVD 166 D K E ++KQQEIL+ R+NP+K K Y+ ++ RRA+A+K + E+ + KQ W R++G+IG + Y E R I +P PFG KYD+GERFDLR P+V+ G+V+ Sbjct: 44 DPVKAERFKKQQEILQRRRNPEKLKEYYSDLADRRAKASKLEILKKQAWAERPGETAAQRKQRIEATWESFREQGLIG-KPGTSTYEEPERSIPLPVAPFGLEKYDQGERFDLRSPWVESGWVN 166
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|545364270|ref|XP_005647199.1| (hypothetical protein COCSUDRAFT_63797 [Coccomyxa subellipsoidea C-169] >gi|384249173|gb|EIE22655.1| hypothetical protein COCSUDRAFT_63797 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 82.4185 bits (202), Expect = 2.227e-16 Identity = 57/159 (35.85%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 53 EKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANK-----NYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKPTMLPQGLDSDGPNSKKGAK 206 EKE+AY+ QQ++LR R ++ ++ ++VN RRA+ K YK+K + K + + ER N IIIP PFG +YD+GERFDL+ Y D+G+VDE A G +KR FG GK +GP K+G K Sbjct: 18 EKEDAYRAQQDVLRRR----REGSWQKDVNARRAKVKKYNTDPEYKKKIDEDKRAR--------------ALAERPPDPIVNAFN--IIIPLAPFGIPEYDQGERFDLKAKYCDNGWVDEEAEFGKQVKRFFGMGKKKSDDES-----EEGPTDKRGKK 151
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|1072224555|gb|OEU09305.1| (hypothetical protein FRACYDRAFT_195476 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.0333 bits (201), Expect = 7.954e-16 Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 39 MTAGLFD----GLFLSDSEKEEAYQKQQEILRARQNPDKQK-AYFQEVNKRRAEANK----NYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNR--GIIIPQVPFGNT-------KYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFG 180 + G+FD G E + Y KQQ IL R+ P Q+ YFQ+V +RR A+K N+ + K G +DP +W + R G IG+ E +QYG+ + GI +P FG K+D G RFDLRLPY D GYVDE + + + FG Sbjct: 12 LQMGMFDNWRAGGTAGGDELNDEYAKQQRILEERRAPKSQRDKYFQKVEQRRQTADKERSDNWAWQTKTYKKG-EDPIDEWKKRRADGTIGDLE--DQYGDPKKIGGIPLPMASFGVGGEFGLGGKFDNGGRFDLRLPYADQGYVDEDSDVMGKLSGFFG 168
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|1210513348|dbj|GAX27745.1| (hypothetical protein FisN_13Hh155 [Fistulifera solaris]) HSP 1 Score: 78.9518 bits (193), Expect = 1.545e-14 Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 0 Query: 38 VMTAGLFDGLFLSDSEKE---EAYQKQQEILRARQNPDKQKA-YFQEVNKRRAEANKNYKEKFNLSKNG---KQDPAIKWMELRKKGVIGEREKYEQYGETNR--GIIIPQVPFGNT-------KYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKPTM 189 + GLFDG S K+ E +++QQEILR R+ P ++ YF +V +RRAEA ++ + K +DP +W + R G I + + QYG+ + GI +P FG K+D G RFDLRLPY + GYVD+ + + + FG GK K + Sbjct: 32 ALHMGLFDGFKGMGSGKDDLDEQWERQQEILRNRRKPQAEREQYFSKVAQRRAEATAKQEQMWAWQKKSYAKGEDPLDEWKKRRADGSISDLD--NQYGDPKKIGGIPLPMASFGVGGEFGVGGKFDNGGRFDLRLPYAEQGYVDDDSDVMGKLSSFFG-GKKEKKNL 196
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|223999169|ref|XP_002289257.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974465|gb|EED92794.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 78.5666 bits (192), Expect = 1.753e-14 Identity = 66/194 (34.02%), Postives = 96/194 (49.48%), Query Frame = 0 Query: 8 LALLLTCASTALAFVVRPAYQ--VSQLRRIRGVMTAGLFDGLFLSDSEKEEAYQKQQEILRARQ-NPDKQKAYFQEVNKRRAEANKNYKEKFNLSKN---GKQDPAIKWMELRKKGVIGEREKYEQYGETNR--GIIIPQVPFGNT-------KYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASK 186 + L S+++AF ++Q VS L +G A D E ++KQQE+LR RQ +P++++ YF++V RR +A + +K+ K DP +W + R+ G I + E QYG+ GI +P FG K+D G RFDLRLPY + G+VDE A N FG GK K Sbjct: 9 VVLCGIVVSSSVAFAPAKSFQSSVSALHFFKGGSGAKDLD----------EEWEKQQEMLRLRQASPEEREKYFKQVEDRRIKATEEQVDKWAWQKKQYAKGDDPINEWRKRRESGQISDLEN--QYGDPKEVGGIPMPMASFGVGGEFGVGGKFDNGGRFDLRLPYAEQGWVDEDADP-NPFANWFGGGKNKK 189
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|1189392046|gb|OSX78965.1| (hypothetical protein BU14_0093s0008 [Porphyra umbilicalis]) HSP 1 Score: 75.485 bits (184), Expect = 8.716e-14 Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 0 Query: 50 SDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANKNYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGK 183 S+ +++ Q+ +L R++ Y EV +RRA+ +++ L +DP W +G+I YE E GI +P FG KYD GERFDLRLP+V+ GY D A + I R FGFGK Sbjct: 7 SEEQRQAEVDAQRAMLARRRDEKAAAKYMAEVEQRRADTEAHFQSN-KLDIQPGEDPIEAWRRKEARGLIKPL-GYEDVPEG--GIPMPMASFGIPKYDNGERFDLRLPHVEVGYEDPDADIMGKIGRFFGFGK 136
BLAST of EWM26252.1 vs. NCBI_GenBank
Match: gi|298709067|emb|CBJ31016.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6406 bits (187), Expect = 1.293e-13 Identity = 66/195 (33.85%), Postives = 94/195 (48.21%), Query Frame = 0 Query: 9 ALLLTCASTALA------FV------VRPAYQVSQLRRIRGVMTAGLFDGLFLSDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEAN-KNYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNT-------KYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGK 183 AL L STA A FV +RP+ + + + GL S+ +E ++ QQE+L+ R N Y +VN++RA+A+ K K K+ K+ DP + W +++ +G I E YE+ GI IP FG K+DEG RFDLRLPY D GYVD + I +FG+ K Sbjct: 5 ALALVATSTASAAQQQSCFVPSVGGGLRPSSKTTSSSMQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSKVNEKRAQADAKANKWKWQTEKSS-FDPLVAWKKMKSEGKIDEV--YEEGENEEGGIPIPMASFGVGGSFGVGGKWDEGGRFDLRLPYADQGYVDPDEAPMKKIGSVFGWNK 196 The following BLAST results are available for this feature:
BLAST of EWM26252.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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