EWM26245.1, cds4449 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|585108244|gb|EWM26245.1| (proteasome alpha5 isoform a [Nannochloropsis gaditana]) HSP 1 Score: 880.937 bits (2275), Expect = 0.000e+0 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 Query: 1 MTDGDILACLRRKRSIAPDVPVDPPNAQPPPSPSLSLPSPHFLRRLRHTNPPCLLLAIVVLLLNFVCAVHAALESGNNGGRRLVEVYHPFPYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSSRVQTRPQHRHEQAGRSQVTDPSRETCAVFPFPDQLEMASADTGQPPGTGNFHRPTQQFNETSKPSIHVKSNN 430 MTDGDILACLRRKRSIAPDVPVDPPNAQPPPSPSLSLPSPHFLRRLRHTNPPCLLLAIVVLLLNFVCAVHAALESGNNGGRRLVEVYHPFPYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSSRVQTRPQHRHEQAGRSQVTDPSRETCAVFPFPDQLEMASADTGQPPGTGNFHRPTQQFNETSKPSIHVKSNN Sbjct: 1 MTDGDILACLRRKRSIAPDVPVDPPNAQPPPSPSLSLPSPHFLRRLRHTNPPCLLLAIVVLLLNFVCAVHAALESGNNGGRRLVEVYHPFPYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSSRVQTRPQHRHEQAGRSQVTDPSRETCAVFPFPDQLEMASADTGQPPGTGNFHRPTQQFNETSKPSIHVKSNN 430
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|669330454|gb|KFD70629.1| (hypothetical protein M514_12670 [Trichuris suis]) HSP 1 Score: 108.612 bits (270), Expect = 1.106e-23 Identity = 80/269 (29.74%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 91 PYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVG-PTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358 ++PEG + Q+ +A +A+ GS A+ + K+GV+LV +R SPL+ KI ++D HI +GL+ D R +V R R+ + +WFVYGE++ + G +T A L E GD +A E +R FGV LFAG VD T P ++ + PSG F+ SA+AIG + A+ +L+ +Y +TL E Q L I I VME+ +S Sbjct: 14 TFSPEGRLFQVEYAIEAIKLGSTAIGIQTKEGVLLVCEKRITSPLMEAHSVEKIMKIDSHIGCTTSGLIGDTRTLVDRARVEALNYWFVYGEQISVEG--------VTQAVSNLALE-----------------------FGDDDA----EAAMSRPFGVAMLFAG-------------------------VDKTGPR-----------LFNLDPSGTFIECSAKAIGAACESAQQVLQEKYHSEITLREAQLLTITILKQVMEEKVTS 211
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|669222782|emb|CDW55919.1| (proteasome subunit alpha type 5 [Trichuris trichiura]) HSP 1 Score: 108.612 bits (270), Expect = 1.106e-23 Identity = 80/269 (29.74%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 91 PYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVG-PTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358 ++PEG + Q+ +A +A+ GS A+ + K+GV+LV +R SPL+ KI ++D HI +GL+ D R +V R R+ + +WFVYGE++ + G +T A L E GD +A E +R FGV LFAG VD T P ++ + PSG F+ SA+AIG + A+ +L+ +Y +TL E Q L I I VME+ +S Sbjct: 14 TFSPEGRLFQVEYAIEAIKLGSTAIGIQTKEGVLLVCEKRITSPLMEAHSVEKIMKIDSHIGCTTSGLIGDTRTLVDRARVEALNYWFVYGEQISVEG--------VTQAVSNLALE-----------------------FGDDDA----EAAMSRPFGVAMLFAG-------------------------VDKTGPR-----------LFNLDPSGTFIECSAKAIGAACESAQQVLQEKYHSEITLREAQLLTITILKQVMEEKVTS 211
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|768432866|ref|XP_011557776.1| (PREDICTED: proteasome subunit alpha type-5-like [Plutella xylostella] >gi|768434385|ref|XP_011558600.1| PREDICTED: proteasome subunit alpha type-5-like [Plutella xylostella]) HSP 1 Score: 104.375 bits (259), Expect = 7.537e-22 Identity = 78/267 (29.21%), Postives = 118/267 (44.19%), Query Frame = 0 Query: 92 YTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPT-PKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSS 357 ++PEG + Q+ +A +A+ GS A+ + +GVVL +R SPL+ T KI ++D+HIA ++GL+ D R +V R R+ SQQHWFVY E + + +S + I+ S D G A +R FGV +FAG +D P +Y M PSG FV++ A+AIG + A+ L+ Y +TL+E + A+ I VME+ S Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARMESQQHWFVYNERMSVESCAQAVSNLA------------------------IQFGDSDDDSGTA---------MSRPFGVAIMFAG-------------------------IDEKGP-----------QLYHMDPSGTFVQYDAKAIGSGSEGAQQSLKEAYHKSMTLKEAIKSALTILKQVMEEKLS 212
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|195027251|ref|XP_001986497.1| (GH21393 [Drosophila grimshawi] >gi|193902497|gb|EDW01364.1| GH21393 [Drosophila grimshawi]) HSP 1 Score: 103.605 bits (257), Expect = 8.565e-22 Identity = 72/264 (27.27%), Postives = 116/264 (43.94%), Query Frame = 0 Query: 92 YTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPT-PKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMED 354 ++PEG + Q+ +A +A+ GS A+ + D VVL +R SPL+V T KI ++D+HI +GL+ D R ++ R R+ Q HWFVY EE+ + +S + G G+ GA+ +R FGV LFAG ++ +P ++ M PSG ++R+SA+AIG + A+ L+ +Y P +TL + L ++ VME+ Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPLMVPKTVEKIVKVDEHIGCATSGLMADARTLIERARVECQNHWFVYNEEMTVESCAQAVSTLAIQF-------GDSGDSDGAAAM-------------------------SRPFGVAILFAG-------------------------IENGKP-----------QLWHMDPSGTYIRYSAKAIGSGSEGAQQNLQDKYTPEMTLSDATDLCLNTLKQVMEE 210
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|999972655|gb|KXJ11829.1| (Proteasome subunit alpha type-5 [Exaiptasia pallida]) HSP 1 Score: 102.834 bits (255), Expect = 1.568e-21 Identity = 73/265 (27.55%), Postives = 114/265 (43.02%), Query Frame = 0 Query: 91 PYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLV-GPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMED 354 ++PEG + Q+ +A +A+ GS A+ + +GVVL +R SPL+ KI ++D+HI M+GL+ D R ++ + R+ +Q HWF Y E + L +T A L E GD +A +EG +R FGV LF G +D P+ ++ + PSG F+ + A+AIG + A+ LE Y +TL E + A+ I VME+ Sbjct: 14 TFSPEGRLFQVEYAIEAIKLGSTAIGIRTSEGVVLAVEKRITSPLMEPSSVEKIVEVDRHIGCAMSGLIADSRTMIDKARVEAQNHWFTYNESISLES--------ITQAVSNLALE-----------------------FGDDDA---REGAMSRPFGVALLFGG-------------------------IDDKGPS-----------LFHLDPSGTFIEYDAKAIGSGSEGAQHALEEAYHKSMTLSEASKSALTILKQVMEE 208
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|919002979|ref|XP_013415229.1| (PREDICTED: proteasome subunit alpha type-5-like isoform X1 [Lingula anatina]) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 73/268 (27.24%), Postives = 116/268 (43.28%), Query Frame = 0 Query: 92 YTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLV-GPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358 ++PEG I Q+ +A +A+ GS A+ + +GVVL +R SPL+ KI ++D HI M+GL+ D R +V R R+ +Q HWF Y E + + + +S + + GD +A+ G +R FGV LFAG +D P ++ M PSG F+++ A+AIG + A+ L+ Y +TL+E + A+ I VME+ +S Sbjct: 15 FSPEGRIFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLIEPSSIEKIFEIDHHIGCAMSGLIADSRTMVDRARVEAQNHWFTYNENMSVESVTQSVSNLALA-------------------------------FGDDDAD---PGAMSRPFGVALLFAG-------------------------IDDKGPQ-----------LFHMDPSGTFIQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACKNALTILKQVMEEKLNS 212
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|919002981|ref|XP_013415237.1| (PREDICTED: proteasome subunit alpha type-5-like isoform X2 [Lingula anatina]) HSP 1 Score: 102.064 bits (253), Expect = 2.604e-21 Identity = 73/268 (27.24%), Postives = 116/268 (43.28%), Query Frame = 0 Query: 92 YTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLV-GPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358 ++PEG I Q+ +A +A+ GS A+ + +GVVL +R SPL+ KI ++D HI M+GL+ D R +V R R+ +Q HWF Y E + + + +S + + GD +A+ G +R FGV LFAG +D P ++ M PSG F+++ A+AIG + A+ L+ Y +TL+E + A+ I VME+ +S Sbjct: 15 FSPEGRIFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLIEPSSIEKIFEIDHHIGCAMSGLIADSRTMVDRARVEAQNHWFTYNENMSVESVTQSVSNLALA-------------------------------FGDDDAD---PGAMSRPFGVALLFAG-------------------------IDDKGPQ-----------LFHMDPSGTFIQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACKNALTILKQVMEEKLNS 212
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|1191565696|gb|OTF72993.1| (proteasome subunit alpha type-5-like protein [Euroglyphus maynei]) HSP 1 Score: 101.293 bits (251), Expect = 5.012e-21 Identity = 75/269 (27.88%), Postives = 118/269 (43.87%), Query Frame = 0 Query: 91 PYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLL-VGPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358 ++PEG + Q+ +A +A+ GS A+A+ DGV+L +R SPL+ V T KI ++D HIA +GL+ D R +V R R+ +QQHWF+Y E++ + T A L + GD+++E P FG+ LFAG VD P+ ++ M PSG +V A+AIG + A+ L+ Y +T+++ + + I VME+ SS Sbjct: 14 TFSPEGRLFQVEYAIEAIKLGSTAIAVKCTDGVILAVEKRITSPLMDVSATEKISEIDNHIACACSGLMADARTMVDRARVETQQHWFLYNEKMSVES--------CTQAVANLAIQ-----------------------FGDSDSEGSAMSRP---FGLAILFAG-------------------------VDADGPS-----------LFFMDPSGTYVSCDAKAIGSGCEGAQQALQEIYNKSITIDDAIKSVMKILKQVMEEKLSS 212
BLAST of EWM26245.1 vs. NCBI_GenBank
Match: gi|961079314|ref|XP_014767927.1| (PREDICTED: proteasome subunit alpha type-5-like [Octopus bimaculoides] >gi|918331000|gb|KOF94795.1| hypothetical protein OCBIM_22000646mg [Octopus bimaculoides]) HSP 1 Score: 101.293 bits (251), Expect = 5.339e-21 Identity = 72/284 (25.35%), Postives = 125/284 (44.01%), Query Frame = 0 Query: 91 PYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPT-PKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKGASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVME---DSSSSRVQTRPQHRHEQ 370 ++PEG + Q+ +A +A+ GS A+ + DG+VL +R PL+V + K+ ++D HI M+GLV D R ++ R R+ +Q HWF Y E++ + + +S + + GD +A+ G +R FGV LFAG +D P ++ M PSG F+++ A+AIG + A+ L+ Y ++L+ ++ A+ I VME DS++ + T + ++ Q Sbjct: 14 TFSPEGRLFQVEYAIEAIKLGSTAIGIQTNDGIVLAVEKRVTCPLIVASSIEKVLEIDSHIGCAMSGLVADSRTMIDRARVEAQNHWFTYNEKMSVESVTQAVSNLALA-------------------------------FGDDDAD---PGAMSRPFGVALLFAG-------------------------IDEKGPQ-----------LFHMDPSGTFIQYDAKAIGSGSEGAQQALQDVYHKSMSLDNARKEALKILQQVMEEKLDSTNVEMATVTREKNFQ 227 The following BLAST results are available for this feature:
BLAST of EWM26245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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