EWM26198.1, cds4435 (CDS) Nannochloropsis gaditana

Overview
NameEWM26198.1
Unique Namecds4435
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:611959..614607 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26198.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100025g45.7489.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:611959..614607 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|585108197|gb|EWM26198.1| (hypothetical protein Naga_100025g45 [Nannochloropsis gaditana])

HSP 1 Score: 1765.74 bits (4572), Expect = 0.000e+0
Identity = 882/882 (100.00%), Postives = 882/882 (100.00%), Query Frame = 0
Query:    1 MNNVLLGAAGFGRPDLEEKEGFVEEREGRNFEAKGGEEAGEDEEEEEGEGLEEGREEEEEVSGQEEEEARMATLEAASRLFLETLLLTEGGAWHLVTGQGLAWPDLGGREGDSPSSSALAWRNVRLQPSGTGDGGMTIPAQTAKGQRTLPTEVLELNARLVALLVEGVGDCGEALYAQLVFLQERRRRTQGAGENSGTGAGTGGRWMRAWERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAAAYWKAKILAEFESSEEGDGGNPGGESAQHASETNPEAYFKAYHQAQSAERKAQRHETEEPLEEKLEIEKLFPEATKGAKEKETWEGGSGEEEEGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPRAIRVSRMAGDASTASSSHVPALGQKGLVLPKQCPDQTALAETDNDRRGQLGGEPLWDGLNLHQGYRERERQTLQHRAEAALVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLGCAPNSPSAGDALILFRALASLDGAALWPLLMAAAGWDVSFRPPRQGIGVGEGRGDDGEGDGLRVRKDKAGEKFARYHADILLKYVESGEIEEMAWCVS 882
            MNNVLLGAAGFGRPDLEEKEGFVEEREGRNFEAKGGEEAGEDEEEEEGEGLEEGREEEEEVSGQEEEEARMATLEAASRLFLETLLLTEGGAWHLVTGQGLAWPDLGGREGDSPSSSALAWRNVRLQPSGTGDGGMTIPAQTAKGQRTLPTEVLELNARLVALLVEGVGDCGEALYAQLVFLQERRRRTQGAGENSGTGAGTGGRWMRAWERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAAAYWKAKILAEFESSEEGDGGNPGGESAQHASETNPEAYFKAYHQAQSAERKAQRHETEEPLEEKLEIEKLFPEATKGAKEKETWEGGSGEEEEGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPRAIRVSRMAGDASTASSSHVPALGQKGLVLPKQCPDQTALAETDNDRRGQLGGEPLWDGLNLHQGYRERERQTLQHRAEAALVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLGCAPNSPSAGDALILFRALASLDGAALWPLLMAAAGWDVSFRPPRQGIGVGEGRGDDGEGDGLRVRKDKAGEKFARYHADILLKYVESGEIEEMAWCVS
Sbjct:    1 MNNVLLGAAGFGRPDLEEKEGFVEEREGRNFEAKGGEEAGEDEEEEEGEGLEEGREEEEEVSGQEEEEARMATLEAASRLFLETLLLTEGGAWHLVTGQGLAWPDLGGREGDSPSSSALAWRNVRLQPSGTGDGGMTIPAQTAKGQRTLPTEVLELNARLVALLVEGVGDCGEALYAQLVFLQERRRRTQGAGENSGTGAGTGGRWMRAWERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAAAYWKAKILAEFESSEEGDGGNPGGESAQHASETNPEAYFKAYHQAQSAERKAQRHETEEPLEEKLEIEKLFPEATKGAKEKETWEGGSGEEEEGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPRAIRVSRMAGDASTASSSHVPALGQKGLVLPKQCPDQTALAETDNDRRGQLGGEPLWDGLNLHQGYRERERQTLQHRAEAALVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLGCAPNSPSAGDALILFRALASLDGAALWPLLMAAAGWDVSFRPPRQGIGVGEGRGDDGEGDGLRVRKDKAGEKFARYHADILLKYVESGEIEEMAWCVS 882          
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|353236241|emb|CCA68240.1| (hypothetical protein PIIN_02106 [Serendipita indica DSM 11827])

HSP 1 Score: 80.4925 bits (197), Expect = 9.047e-12
Identity = 43/156 (27.56%), Postives = 75/156 (48.08%), Query Frame = 0
Query:  501 GAKEKETWEGGSGEEEEGEETDEDDKP--TSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILL 654
            G   +  W     E+ E E+  EDD P     ++L+ +I+++  YFL +PS FI+ + L VL  ++S LS+    LLP+VH  WP ++ RL                         +   +VVE  +++  L    G+++  K  +++WPV + L+
Sbjct:  856 GPAPRRAWGTSESEQNEAEQKQEDDAPKLNPTQTLVQQIVKKSIYFLTHPSPFIRARILLVLTSSVSTLSTIESSLLPSVHAAWPFILNRLN-----------------------DSEPFVVVEAAELIQALTEHVGEFMDLKIWDDVWPVFRNLI 988          
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|298707619|emb|CBJ30187.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 76.6406 bits (187), Expect = 1.531e-10
Identity = 132/490 (26.94%), Postives = 189/490 (38.57%), Query Frame = 0
Query:  110 EGDSPSSSALAWRNVRLQPSGT-----GDGGMTIPAQTAKGQRTLPTEVLELNARLVALLVEGVGDCGEALYAQLVFLQERRRRTQGAGENSGTGAGTGGRWMRAWERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQ--------GRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCG--HRYAYEMMRVLRAMGQAVPLPGDGP--RSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAA-AYWKAKILAEF-----------ESSEEGDGGNPGGESAQHASETNPEAYFKAYHQAQSAERKAQRHETEEPLEE-KLEIEKLFPEATKGAKEKETWEGGSGEEEEGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSS 569
            EG+    +ALA R+V    SG      GDGG    ++   GQ      VL+ NA LV+ +VE +G   EA                     SG G G         E FL   L+PL+EK    HPVV Q+AL TL R+  A             G   DT+                 +LL AN+DY+V+ +   V  S         G T  +G   GG  +    P V+EA++   G     AL+R+LA V L  VD     C    R     + VLRA+   V LP   P   S+    +GV     +    E+      +      A + W  ++  EF            SS  GD           A + + EA         S E + +        E  K +  ++  EA K A + E    G  E  E +        + E   + E++ R C++LA PSL  Q  +LA +R+ + +L+S
Sbjct:  851 EGERGDVAALARRSVEYTRSGQVLGVGGDGGARSRSRGVSGQ------VLDANATLVSTVVEALGSLAEA---------------------SGPGCG---------EAFLRRALYPLLEKAASTHPVVSQSALATLARVRVAC------------GDFEDTS-----------------QLLEANMDYVVDDVVRRVSSSSRRSRNMDGGSTMITGGGRGGTSAGSGIPGVVEAVLRIGGSAMGPALVRDLAGVTLREVDA----CAWDPRQTRRSLGVLRAVASCVTLPPLPPPENSEKFPNSGVDQHDKDDKEEEDLQGTTERNGESALAESPWFRQLFVEFADASDVLRVEENSSGVGDKAKAATNGLVKAVKEHREAMGYDVTDDDSEEGRVESDTANTEYERTKAKWREIEEEARKAAGQAEEESDGQQELPEPDAEGRKIAESEEVKTLSEVLARSCHYLATPSLETQALALACMRDCVLKLAS 1271          
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|646291480|gb|KDQ12666.1| (hypothetical protein BOTBODRAFT_45767 [Botryobasidium botryosum FD-172 SS1])

HSP 1 Score: 72.4034 bits (176), Expect = 3.365e-9
Identity = 51/198 (25.76%), Postives = 91/198 (45.96%), Query Frame = 0
Query:  478 RHETEEPLEEKLEIEKLFPEATKGAKEKETWEGGSGEEEEGEETDEDD---KPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLL----ASAKSFHERRAGG 668
            +H  + P +EK E     P+  +G  + +     + EE   +  D+ D   +P+  ++L+  I+ R  YFL +PS  I+ + LA+LR + + L S    +LP+VH+ WP ++ R          P                   +V E   +V GL    GD+++ +  +++WP  + +L+    A AKS   +R  G
Sbjct:  858 KHRNDIPGKEKAEDLGPTPQQARGLSKDDQ----ANEERPTQPIDQKDDTPQPSPTQTLVERIVSRSIYFLTHPSPLIRARILALLRSSTAVLRSSPSSILPSVHKAWPFIVNRF-------SDPEP----------------FVVTEAAALVEGLVTHAGDFMAHRVWDDVWPRFQKMLVALDQADAKSALAKRGRG 1028          
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|1101814765|ref|XP_019002404.1| (hypothetical protein I203_04885 [Kwoniella mangroviensis CBS 8507] >gi|1045473947|gb|OCF65865.1| hypothetical protein I203_04885 [Kwoniella mangroviensis CBS 8507])

HSP 1 Score: 68.9366 bits (167), Expect = 4.203e-8
Identity = 96/473 (20.30%), Postives = 177/473 (37.42%), Query Frame = 0
Query:  225 LGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVD--MEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAAAYWKAKILAEFESSEEGDGGNPGGESAQHASETNPEAYFKAYHQAQSAERKAQRHETEEPLEEKLEIEKLFPEATKGAKEKETWEGGSGEEE-----EGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLS--SRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPRAIRVSRMAGDASTASSSH 688
            L  PHP+++  A T++++++                     N+  A   PQ         ++  N+DY++  +  H+  +             +LS P AP VL A++   G +        +  +V ++VD   + L   H Y      +L  +G  + +  D   SK           G    R N+  ++ +V R P                                    P+  F+ +   +    K +  E  E LE         P+   G  +  + E    E++     E    DE+  PT  +++ + I+E+  +FL + S F++++ L+++      LS  +R   LLP + R W +++ RL                 DEKD        +V E  +++  L    GD++S +  + +WP +KILL    ++  ++ A   R     R  G     S+SH
Sbjct:  736 LASPHPIIRDYATTSIHQISY--------------------NIGYAS--PQN--------MVLDNVDYVINIVTLHLLPT-------------KLS-PTAPLVLIAMIKLVGSR--------IVPMVHDLVDEIFDALNDYHGYEALASSLLAVLGTLIEVMNDEISSK-----------GMSEERRNKLNEMRRVERPP-----------------------------------EPKEDFEQFFGWRDDRNKRREEEVGEILERA-------PQHAWGKGDIPSTENQEAEDKQVGSPENPVDDEEIPPTRTQTVCIRILEKSVFFLTHNSPFLRYKILSIISSATIVLSRGNREKELLPLIDRSWNSILNRL-----------------DEKDHP-----YIVTEACEVIEKLCEELGDFMSKRVIDHVWPRVKILLQDQWEN-DKKSALAKRTTWARRFTGRMDKYSTSH 1080          
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|751670986|gb|KIM21249.1| (hypothetical protein M408DRAFT_29694 [Serendipita vermifera MAFF 305830])

HSP 1 Score: 68.1662 bits (165), Expect = 5.644e-8
Identity = 40/152 (26.32%), Postives = 75/152 (49.34%), Query Frame = 0
Query:  503 KEKETWEGGSGEEEEGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILL 654
            +E++  E  +G  +  E+      PT  + L+ +++++  YFL +PS  I+ + L+VL  ++S LSS    LLPT+H  WP ++ R +          +  P              +VVE  +++  L    G+++  K  E++WPV + L+
Sbjct:  885 QEEDVAEDKNGNGQAAEDGPPKLSPT--QKLVQQVLDKSIYFLTHPSAVIRARVLSVLASSISTLSSVESSLLPTIHTAWPFILNRFKTT--------TEEP-------------FVVVEAAELIRALVENVGNFMDSKVWEDVWPVFRNLV 1013          
BLAST of EWM26198.1 vs. NCBI_GenBank
Match: gi|1045461833|gb|OCF55214.1| (hypothetical protein L486_07327 [Kwoniella mangroviensis CBS 10435])

HSP 1 Score: 65.4698 bits (158), Expect = 4.942e-7
Identity = 93/471 (19.75%), Postives = 176/471 (37.37%), Query Frame = 0
Query:  225 LGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAAAYWKAKILAEFESSEEGDGGNPGGESAQHASETNPEAYFKAYHQAQSAERKAQRHETEEPLEEKLEIEKLFPEATKGAKEKETWEGGSGEEE-----EGEETDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLS--SRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPRAIRVSRMAGDASTASSSH 688
            L  P P+++  A T++++++                     N+  A   PQ         ++  N+DY++  +  H+  +             +LS P AP VL A++   G +  + ++ +L   + + +D       H Y      +L  +G  + +  D   SK           G    R N+  ++ +V R P                                    P+  F+ +   +    K +  E  E LE         P+   G  +  + E    E++     E    DE+  PT  +++ + I+E+  +FL + S F++++ L+++      LS  +R   LLP + R W +++ RL                 DEKD        +V E  +++  L    GD++S +  + +WP +KILL    ++  ++ A   R     R  G     S+SH
Sbjct:  765 LASPQPIIRDYATTSIHQISY--------------------NIGYAS--PQN--------MVLDNVDYVINIVTLHLLPT-------------KLS-PTAPLVLIAMIKLVGSRI-VPMVHDLVDEIFDALD-----DYHGYEALASSLLAVLGTLIEVMNDEISSK-----------GMSEERRNKLNEMRRVERPP-----------------------------------EPKEDFEQFFGWRDDRNKRREEEVGEILERA-------PQHAWGKGDIPSTENQEAEDKQDGSPENPVDDEEIPPTRTQTVCIRILEKSVFFLTHNSPFLRYKILSIISSATIVLSRGNREKELLPLIDRSWNSILNRL-----------------DEKDHP-----YIVTEACEVIEKLCEELGDFMSKRVIDHVWPRVKILLQDQWEN-DKKSALAKRTTWARRFTGRMDKYSTSH 1109          
The following BLAST results are available for this feature:
BLAST of EWM26198.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585108197|gb|EWM26198.1|0.000e+0100.00hypothetical protein Naga_100025g45 [Nannochlorops... [more]
gi|353236241|emb|CCA68240.1|9.047e-1227.56hypothetical protein PIIN_02106 [Serendipita indic... [more]
gi|298707619|emb|CBJ30187.1|1.531e-1026.94conserved unknown protein [Ectocarpus siliculosus][more]
gi|646291480|gb|KDQ12666.1|3.365e-925.76hypothetical protein BOTBODRAFT_45767 [Botryobasid... [more]
gi|1101814765|ref|XP_019002404.1|4.203e-820.30hypothetical protein I203_04885 [Kwoniella mangrov... [more]
gi|751670986|gb|KIM21249.1|5.644e-826.32hypothetical protein M408DRAFT_29694 [Serendipita ... [more]
gi|1045461833|gb|OCF55214.1|4.942e-719.75hypothetical protein L486_07327 [Kwoniella mangrov... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4446rna4446Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications