EWM26243.1, cds4430 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|585108242|gb|EWM26243.1| (Heat shock protein Hsp33 [Nannochloropsis gaditana]) HSP 1 Score: 896.73 bits (2316), Expect = 0.000e+0 Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0
Query: 1 MDRSKIKILPTPHILRCLPLLCSFLPFLSMASAFIPLTSRLRNSPLVRVCRRTMHPPTFSMREGMSFNSPPYTRNNNRPTSRGPSFRLFKTSAPLHANAGGTNNDDFVPISPATLNWEKIGPDQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEPWPAR 436
MDRSKIKILPTPHILRCLPLLCSFLPFLSMASAFIPLTSRLRNSPLVRVCRRTMHPPTFSMREGMSFNSPPYTRNNNRPTSRGPSFRLFKTSAPLHANAGGTNNDDFVPISPATLNWEKIGPDQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEPWPAR
Sbjct: 1 MDRSKIKILPTPHILRCLPLLCSFLPFLSMASAFIPLTSRLRNSPLVRVCRRTMHPPTFSMREGMSFNSPPYTRNNNRPTSRGPSFRLFKTSAPLHANAGGTNNDDFVPISPATLNWEKIGPDQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEPWPAR 436
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|1210523077|dbj|GAX18128.1| (molecular chaperone Hsp33 [Fistulifera solaris]) HSP 1 Score: 225.328 bits (573), Expect = 2.552e-66 Identity = 125/312 (40.06%), Postives = 191/312 (61.22%), Query Frame = 0
Query: 123 DQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKER--FGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEP 432
++D SA+S +G + V V + +N++ + ++AV T+ LGR M +L+ANG+++E+T+Q+T GDG +GV+AI+ G+ VR ++G+ L ++ PE AVGKG++QVVKNHP W PYNG+ I G++ DV YLA SEQR+ AL +S+ K SAGG+ IE +PGVE + V +VE NLA L E G++ G+L G+ TP + +LDGL + ++ +P C C+ +++ R++ LL EEVE ILA+E I A+C+FC + Y L +E++ EE L A G+P
Sbjct: 70 NRDQIFSAISGDGGIKVTVATIRNVINDASMQHTMTAVPTDALGRAMTCGLLMANGMQEEQTVQITMKGDGPLRGVVAIATGSGTVRGYVGSPMLGEMSLPE--------AVGKGSVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAAVSV--KGILCTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGTGNLPTGLLLQGQ---TPVDIAATILDGLDMKPLQQMEPVLVCQCTEDRLMRSLRLLPREEVEDILAKEQQIEARCQFCGKVYRLGKEEI----EERLQNA-TGDP 363
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|1072225815|gb|OEU10560.1| (Hsp33 domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 224.557 bits (571), Expect = 7.725e-66 Identity = 113/295 (38.31%), Postives = 188/295 (63.73%), Query Frame = 0
Query: 124 QDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGS--VDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQL 416
D SALS++G V + +A+N+V + ++AV + +GR ++ A++++NG+++E+T Q+TF+ DG +GV+AISDG NVR ++G+ L D++ PE A+G+G +QVVKNHP W PYNG+ I G++ D+ YLA SEQR+ AL S++ +AGG+ IE +P E++ +VE NLA L E+ GS + +L G VTP ++ + +LDGLG+ ++ P ++C+CS++++ RA+ L+ +EV+ IL +EG I A+C+FC++ Y L +++
Sbjct: 75 NDQVFSALSEDGSVKITACTARNIVNDLMIMHTMTAVPADAIGRTVVCALMMSNGMQEEQTCQITFNADGPLRGVVAISDGVGNVRGYVGSPMLGDIELPE--------ALGQGMVQVVKNHPDWSNPYNGITSIRHGDIDRDIGAYLAESEQRSCALAAATSINGIL--CTAAGGYLIEQLPNATPETLARVEKNLATLVEKDGSDKLPANLLLNG---VTPLEIAETILDGLGMVPLQQISPKFQCSCSSDRLIRALRLIPRKEVDEILEEEGKIEARCDFCSKTYALGPDEI 356
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|1210531374|dbj|GAX10042.1| (molecular chaperone Hsp33 [Fistulifera solaris]) HSP 1 Score: 223.787 bits (569), Expect = 1.232e-65 Identity = 125/312 (40.06%), Postives = 190/312 (60.90%), Query Frame = 0
Query: 123 DQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKER--FGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEP 432
++D SA+S +G + V V + +N++ + ++ V T+ LGR M +L+ANG+++E+T+Q+T GDG +GV+AI+ G+ VR ++G+ L ++ PE AVGKG++QVVKNHP W PYNG+ I G++ DV YLA SEQR+ AL +S+ K SAGG+ IE +PGVE + V +VE NLA L E G++ G+L G+ TP + +LDGL + ++ +P C C+ +++ R++ LL EEVE ILA+E I A+C+FC + Y L +E++ EE L A GEP
Sbjct: 69 NRDQIFSAISGDGGIKVTVATIRNVINDASMQHTMTFVPTDALGRAMTCGLLMANGMQEEQTVQITMKGDGPLRGVVAIATGSGTVRGYVGSPMLGEMSLPE--------AVGKGSVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAAVSV--KGILCTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGTGNLPTGLLLQGQ---TPVDIAATILDGLDMKPLQQMEPVLVCQCTEDRLMRSLRLLPREEVEDILAKEQQIEARCQFCGKVYRLGKEEI----EERLQNA-TGEP 362
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|219113789|ref|XP_002186478.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583328|gb|ACI65948.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 214.542 bits (545), Expect = 4.630e-62 Identity = 114/312 (36.54%), Postives = 189/312 (60.58%), Query Frame = 0
Query: 123 DQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVD--PGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEP 432
D VF SA+S +G + V + +N++ I + ++A T+ +GR + +L+ANGI+DE+ +Q+T +GDG +G++AI+ G VR ++G+ P G + AVGKG++Q+VKNHP W PYNG+ I G++ D+ YLA SEQR+ AL +++ +AGG+ IE +PGVE E++ +VE NLA L ++ G + +L +G VTP + ++LDGL + ++ +P C C+ +++FR++ LL +EEV+ IL +E I A+C+FC + Y + ++ + LAAA+ G+P
Sbjct: 65 DDQVF-SAMSGDGGIKVTAATVRNLLNDISLQHTMTATPTDAMGRTVTCGLLLANGIQDEQIVQITMNGDGPIRGIVAIASGTGQVRGYVGS--------PGLGEMSLTDAVGKGSVQIVKNHPDWPRPYNGITAIRHGDIDRDIGIYLAESEQRSCALAAATAMNGIL--CTAAGGYLIEQLPGVEPETIARVEQNLAKLVQKDGGDELPANLLLSG---VTPLDMAAIILDGLDMQPLQQIKPGLVCHCTEDRLFRSLRLLSKEEVDDILEKEEQIEARCQFCGKVYRMGAPEI----RDRLAAAK-GDP 357
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|299472430|emb|CBN77618.1| (heat shock protein 33 [Ectocarpus siliculosus]) HSP 1 Score: 206.068 bits (523), Expect = 3.180e-58 Identity = 123/304 (40.46%), Postives = 183/304 (60.20%), Query Frame = 0
Query: 116 NWEKIGPDQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLD-DLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGL-GVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLV 417
N +G D D +SA++ NG V + ++A+N++Q +++L ++ + LGRVM+ ML+A G+KD ET QL+FSG G GV+AISDG VR ++ N ++ LKD G D+ +G+G L+VV+NHP ++ PY G+ + +GEVA D A YLA SEQ++ A+ G + V AGG+ +E +P EE+ V N+A L R S DP L + +TP +V+ LL+GL GVG +P + C CS E+V+ A+ LL + EVE ++ +E I KCEFC + Y LS E +V
Sbjct: 115 NTAPVGNDADHMVSAVAGNGQVVARAVTARNLLQDALIRQDLYPLAADALGRVMVCTMLMAGGLKDRETFQLSFSGSGPLGGVVAISDGEGGVRGYVTNGKVELPLKD--NGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDAL--VRQAGGYMLETLPEASEETEKTVINNIAKLLAR--SSDPSDLMG--RGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKEETIEVKCEFCGKLYRLSAEDVV 410
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|545705865|ref|XP_005705251.1| (molecular chaperone Hsp33 [Galdieria sulphuraria] >gi|452821704|gb|EME28731.1| molecular chaperone Hsp33 [Galdieria sulphuraria]) HSP 1 Score: 191.045 bits (484), Expect = 1.223e-52 Identity = 98/288 (34.03%), Postives = 169/288 (58.68%), Query Frame = 0
Query: 125 DVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELS 412
D +S NG V++K + A +V +E V+T LGR ++ A+L++ G K +ET+ + F G G + V+A++DG VR ++G+ ++D L G+ D+ A+G+G ++V +NH +W+ PY G+ +I SGEVA D+A YL SEQ +A+ G+ + P G V +AGG+ ++++PG EE+ L +L+E S++ + + +V L +GL + +++P YRC CS ++V R V+LL ++E++ ++A G + KCEFC Y+L+
Sbjct: 122 DELARTISCNGKVSLKSLVATGLVDGAARIQETKPVATAALGRTLICALLLSAGKKSDETVNIEFRGSGPLRTVVAVADGLGQVRGYVGDRNVD-LPPNRKGKLDVSRAIGEGIVRVTRNHYTWKQPYQGLTRIVSGEVAEDIANYLYQSEQIFSAVAAGVFVKPD-GSVSAAGGYLVQLLPGASEET-------LKLLEETLYSLEYSPTEMIRLGMNSTDIVNKLAEGLNIQQVHKSRPLYRCHCSIDRVERTVALLPKDEIDQLVASIGTLQVKCEFCNRTYQLT 400
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|223997486|ref|XP_002288416.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975524|gb|EED93852.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 189.504 bits (480), Expect = 6.608e-52 Identity = 113/313 (36.10%), Postives = 175/313 (55.91%), Query Frame = 0
Query: 123 DQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDL-DDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFG--SVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEP 432
D VF SA+S +G + V V + +N++ + + ++ V + +GR L A++ +NG+++E+ QL+ G+G +G + I G R ++GN L DD ++ AVG GT+QVVKNHP W PYNG+ I G++ DV YLA SEQR+ AL S + +AGG+ +E +P E++ +E NLA L E G ++ +L GK TP + +LLDGLG+ P C CS EK+ R++ LL +EV+ IL +EG I A+C+FC + Y + E++ E L+ A+ G+P
Sbjct: 117 DDQVF-SAMSSDGGLKVTVATIRNLLNDMMIQHTMNPVPGDAIGRSTLCALMASNGMQEEQMFQLSMKGEGPLRGCVVIVTGKGEARGFVGNPSLGDDFT--------LREAVGTGTVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAATSFNGIL--CTAAGGYLVERLPDCSPETMSHMERNLARLVEMDGGDALPTNLLLDGK---TPLDIASVLLDGLGMEPLGSVLPKAFCECSDEKLMRSLRLLPRKEVDVILQEEGKIEARCQFCGKVYRMGPEEV----ENRLSEAQ-GDP 410
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|926784028|ref|XP_013900488.1| (putative chaperonin [Monoraphidium neglectum] >gi|761970746|gb|KIZ01469.1| putative chaperonin [Monoraphidium neglectum]) HSP 1 Score: 184.496 bits (467), Expect = 2.721e-51 Identity = 107/298 (35.91%), Postives = 176/298 (59.06%), Query Frame = 0
Query: 124 QDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGV-GMAEETQPAYR-CTCSA--EKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLV 417
+DV + +LSQ G V V + N+V + + + +T LGR ++ A+L+A+ KD+E +Q++F GDG GV AI+D +V+ +GNS+ D P+ G+ + AVG+G L VV++HP PY G+V+I SGE+A D+A Y+A SEQ N+AL +G++++ + V +AGG+ ++++P EE++ ++E NL+ L P V + TP + +LDG+G G P Y C A +++ RAV+ LG +EV SI+ ++G I +CE C E Y + E+++
Sbjct: 22 EDVLLRSLSQLGEVAVLAVDGTNLVADAKRRHSTAPTATAALGRTLMGALLMASFRKDDEAVQVSFKGDGVLGGVFAIADTRGHVKGKVGNSNADPPLRPD-GKLAVGDAVGEGVLSVVRSHPLQPQPYTGMVKIVSGEIAEDLATYMAESEQTNSALALGVAIN-RDCSVNAAGGYLVQVLPFCSEETLEQLEKNLSSL--------PSVTKLLQSGATPQDITDRILDGIGTAGAPLAITPKYGPCEADALKDRMKRAVASLGPKEVRSIIEEQGKIEVRCELCNEAYHFTEEEVL 309
BLAST of EWM26243.1 vs. NCBI_GenBank
Match: gi|302842249|ref|XP_002952668.1| (hypothetical protein VOLCADRAFT_62890 [Volvox carteri f. nagariensis] >gi|300262012|gb|EFJ46221.1| hypothetical protein VOLCADRAFT_62890 [Volvox carteri f. nagariensis]) HSP 1 Score: 183.726 bits (465), Expect = 1.557e-50 Identity = 107/296 (36.15%), Postives = 173/296 (58.45%), Query Frame = 0
Query: 125 DVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAE----KVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQL 416
DV + +LS N V+V V+ +V + + +L+ +T LGR +L A+L+ + K++E +Q+TF GDG A ++AI+D NV+ + N D P+ G+ ++ AAVGKG L VV++HP PY G+V I SGEVA D+A YL SEQ N+ALG+G+SLD + V+SAGG+ ++++P EE++ ++E NL + P + ++ + +LDGLGV +T C E ++ RAV+ LG++EV I+ QEG + C+ C + Y+ S++++
Sbjct: 36 DVLLRSLSTNAEVSVLVVDGTKLVSEAQVRHKLAPTATAALGRSLLGALLMGSFRKEDEQVQITFQGDGEAGSILAIADTRGNVKGKVNNPAADPPLRPD-GKLNVGAAVGKGVLAVVRSHPLEPQPYTGMVPIVSGEVAEDLANYLVDSEQTNSALGLGVSLD-RDCRVKSAGGWLVQILPFCSEETLAQLEQNLTTM--------PTITTMLNDGMSVQDITARILDGLGVLPDGQTVMPKYGPCEEEALKKRMIRAVAALGKQEVADIIKQEGKLEVTCDLCQQTYQFSQQEI 321 The following BLAST results are available for this feature:
BLAST of EWM26243.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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