EWM26221.1, cds4423 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|585108220|gb|EWM26221.1| (Uncharacterized protein family UPF0136, Transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 231.106 bits (588), Expect = 1.248e-76 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVVPVPPKKDKK 119
MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVVPVPPKKDKK
Sbjct: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVVPVPPKKDKK 119
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|673029390|ref|XP_008868656.1| (hypothetical protein H310_05665 [Aphanomyces invadans] >gi|574475051|gb|ETW02051.1| hypothetical protein H310_05665 [Aphanomyces invadans]) HSP 1 Score: 87.4261 bits (215), Expect = 6.717e-20 Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVF 103
MY FC+T+PY +A+GGI+GYV +GS SL AG+G G+ L + GY QE++ + V++ W+ LSL VS +++ MGL+ +T+ + + ASTS +S+F
Sbjct: 1 MYDFCLTLPYGAAIAVGGIVGYVNSGSSASLTAGVGAGTLLLVFGYASYQEFQSSPIVSKTWSALSLGVSAVLSVVMGLRYKETQNFVPAGLIASTSIGMSLF 103
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|698801336|ref|XP_009833697.1| (hypothetical protein H257_09238 [Aphanomyces astaci] >gi|574111289|gb|ETV76785.1| hypothetical protein H257_09238 [Aphanomyces astaci]) HSP 1 Score: 85.8853 bits (211), Expect = 2.371e-19 Identity = 43/103 (41.75%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVF 103
MY FC+T+PY +A+GGI+GYV +GS SL AG+G G+ L + GY QE++ + V++ W+ LSL VS +++ MGL+ T+ + + A TS +S+F
Sbjct: 1 MYDFCLTLPYGAAIAVGGIVGYVNSGSSASLTAGVGAGTLLLIFGYASYQEFQSSPVVSKTWSALSLGVSSVLSVVMGLRYKDTQNFVPAGVIAGTSIGMSLF 103
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|813171472|ref|XP_012204491.1| (hypothetical protein SPRG_09677 [Saprolegnia parasitica CBS 223.65] >gi|641530732|gb|KDO24844.1| hypothetical protein SPRG_09677 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 80.1073 bits (196), Expect = 5.316e-17 Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVVPVPPKKDKK 119
MY FC+T+PY G +ALGG++GYV +GS+ SL AGLG GS L + G QEY+++ +++ W+ LSL VS +T+ MGL+ +T + A TS +S F +Y++ +KK
Sbjct: 1 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTASYQEYQQSPKISKLWSGLSLGVSSVLTVVMGLRYKETNSLFPAGVVAGTSAAMSAFYLYKLASNDKANYNKK 119
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|669151172|ref|XP_008611148.1| (hypothetical protein SDRG_07108 [Saprolegnia diclina VS20] >gi|530737156|gb|EQC35398.1| hypothetical protein SDRG_07108 [Saprolegnia diclina VS20]) HSP 1 Score: 79.337 bits (194), Expect = 9.243e-17 Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVVPVPPKKDKK 119
MY FC+T+PY G +ALGG++GYV +GS+ SL AGLG GS L + G QEY+++ +++ W+ LSL VS +T+ MGL+ +T + A TS +S F +Y++ +KK
Sbjct: 1 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTASYQEYQQSPKISKLWSGLSLGVSSVLTVVMGLRYKETNSLFPAGVVAGTSAAMSAFYLYKLASNDKASYNKK 119
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|298707706|emb|CBJ26023.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.485 bits (184), Expect = 3.982e-15 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRV 108
M+ FC+TIPY IV GGIIG++ AGS SL+AG G G+ L +LGYG EYK V++ WT+ SL++S + + M + KT + A + L++ F Y++
Sbjct: 1 MHDFCLTIPYGMIVMFGGIIGFLAAGSKASLMAGGGSGALLMLLGYGGYMEYKAKGTVSQLWTIASLVISNVIWVMMAKRFRKTGKIMPSAPLGILALLMAFFYAYQM 108
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|953487205|emb|CEG49267.1| (transmembrane protein 14c [Plasmopara halstedii]) HSP 1 Score: 75.0998 bits (183), Expect = 4.522e-15 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMY 106
MY FC+TIPY ++ +GG+IG++ GS S+ AG G+ L+ LGY EYK++ ++ W LSL VS +TI MG + KT A+ S +S+F ++
Sbjct: 1 MYDFCLTIPYGMLLGVGGVIGFINTGSTMSVAAGGLSGAILSFLGYCSYNEYKQSPVTSKLWPGLSLAVSTALTITMGNRYNKTNAFFPAGFLAAYSAGMSIFYVW 106
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|1173945651|gb|OQR94249.1| (hypothetical protein ACHHYP_01524 [Achlya hypogyna]) HSP 1 Score: 73.559 bits (179), Expect = 1.821e-14 Identity = 46/109 (42.20%), Postives = 71/109 (65.14%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVV 109
MY FC+T+PY G +ALGG++GYV +GS+ SL AGLG GS L + G QEY+++ +++ W+ LSL VS +T+ MGL+ +T + A TS +S F + +++
Sbjct: 1 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTASYQEYQQSPKISKIWSGLSLGVSSILTVVMGLRYKETNSLFPAGVVAGTSAAMSAFYVIKLL 109
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|1173947857|gb|OQR96032.1| (H/ACA ribonucleoprotein complex subunit [Thraustotheca clavata]) HSP 1 Score: 75.0998 bits (183), Expect = 1.292e-13 Identity = 47/109 (43.12%), Postives = 72/109 (66.06%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVV 109
MY FC+T+PY G +ALGG++GYV +GS+ SL AGLG GS L + G EY+++ V++ W+ LSL VS +T+ MGL+ +T + A TS +S+F +Y+++
Sbjct: 213 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTVSYSEYQQSPKVSKLWSGLSLGVSSVLTVVMGLRYKETNSLFPAGVVAGTSAAMSLFYVYKLL 321
BLAST of EWM26221.1 vs. NCBI_GenBank
Match: gi|18403201|ref|NP_564579.1| (Transmembrane proteins 14C [Arabidopsis thaliana] >gi|75169177|sp|Q9C6T7.1|FAX5_ARATH RecName: Full=Protein FATTY ACID EXPORT 5; Short=At-FAX5 >gi|12321434|gb|AAG50780.1|AC079027_3 unknown protein [Arabidopsis thaliana] >gi|18491153|gb|AAL69479.1| unknown protein [Arabidopsis thaliana] >gi|20466055|gb|AAM20362.1| unknown protein [Arabidopsis thaliana] >gi|21592962|gb|AAM64911.1| unknown [Arabidopsis thaliana] >gi|332194465|gb|AEE32586.1| Transmembrane proteins 14C [Arabidopsis thaliana] >gi|1032297569|gb|OAP11894.1| hypothetical protein AXX17_AT1G44940 [Arabidopsis thaliana]) HSP 1 Score: 69.707 bits (169), Expect = 5.917e-13 Identity = 39/120 (32.50%), Postives = 69/120 (57.50%), Query Frame = 0
Query: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVV---PVPPKKD 117
M+ FC TIPY ++ +GG IGY+K GS+ SL G G G + + G+ L+ ++K + + TLL +++ +T MG + +T+ + A+ A S L++ F +Y++ +PPK +
Sbjct: 1 MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKK-TSLLATLLETVIAAALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPKAE 119 The following BLAST results are available for this feature:
BLAST of EWM26221.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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