EWM26242.1, cds4419 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|585108241|gb|EWM26242.1| (hypothetical protein Naga_100025g64 [Nannochloropsis gaditana]) HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0 Query: 1 MKVGVREHQKEEDVRATMARPMEMQPFYKPVLPRHNLLPPLAAVLCLLLLLSRPDATTEAFVLHLRQAKQWRIQGGATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQRRR 332 MKVGVREHQKEEDVRATMARPMEMQPFYKPVLPRHNLLPPLAAVLCLLLLLSRPDATTEAFVLHLRQAKQWRIQGGATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQRRR Sbjct: 1 MKVGVREHQKEEDVRATMARPMEMQPFYKPVLPRHNLLPPLAAVLCLLLLLSRPDATTEAFVLHLRQAKQWRIQGGATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQRRR 332
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|922862353|gb|KOO29974.1| (hypothetical protein Ctob_013023 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 114.39 bits (285), Expect = 1.890e-26 Identity = 82/251 (32.67%), Postives = 112/251 (44.62%), Query Frame = 0 Query: 83 GDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVH---GARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQR 330 +LS F S F+G FDN QV +E+ G+ GGGHE IHC L+P+ L G V A+YYF+G PDAVFR R+Y+ P P F T +R Y MRL + ++ +T + WS +D+ + +V G RF+G MR + S+R +++ DD+ L D L VNDR TD TG VYGN +PY+M R Sbjct: 25 ASSVLSRFLSQFRGHFDNHEQVETEKLAGLTPREGGGHEHIHCSLQPVTLHDRPQGQ----YVLASYYFNGDPDAVFRERLYAIDELPRD----------------------------PQFGTCVRMRIYKMRL-----STAERLRAGMTLNDVAWSA-------AEDLHASLHVPEADVFWRWCGERFEGSMRTQSIEIISERSGRA-IRVRDDVALWQDALWVNDRATDAETGAYVYGNIHDIPYKMAR 230
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|1072235016|gb|OEU19745.1| (hypothetical protein FRACYDRAFT_235801 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 102.449 bits (254), Expect = 8.181e-21 Identity = 75/277 (27.08%), Postives = 120/277 (43.32%), Query Frame = 0 Query: 82 DGDGLLSH------FRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYD-------MRLLQEP---------------CNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQR 330 DGDG SH +FQG+FDN QV +R G+ GGGHE HC L P+ + + A ++FDG P+ +FR R Y P + + + EMRL+ P+ E +++ ++ D + Q ++ Q V L+ C I+WS ++ I + + +G+ E M G +V+S ++++I D L L + +NDRG D TG +YGN + +PYR++R Sbjct: 82 DGDGESSHEKVTKILSEWFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLVPVTESTRL----------AAFFFDGNPNRIFRFRYYELLTPTIINDVDHQHSNNV-------TVEMRLNTLHPELEQLLKSHSTDPLSWPDIFKNFQHEGVSSNSSSGSSSSSGSDEKNQKVIPLSKCEIVWSF--DKDPIQHSYISSDDGKDDE-AENMSLHAVMVHGEQVVNSTIVPGMQIRILDQLSLYQHVFYINDRGFDPITGAFIYGNQRDIPYRLER 338
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|219125852|ref|XP_002183185.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405460|gb|EEC45403.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.0561 bits (240), Expect = 2.111e-19 Identity = 75/239 (31.38%), Postives = 105/239 (43.93%), Query Frame = 0 Query: 94 FQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRK--NNYDMRLLQEPCNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQR 330 FQG+FDN QV +R +G+ GGGHE IHC L P+ + A +YFDG P A+FR R Y P S + LH P+ E +R+ + L E +V + L C + WS + + Q EG P +H GE LV+SQ ++ I+D L L D L ++DRG D T +YGN +G+PYR++R Sbjct: 70 FQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLVPVSETARL----------AAFYFDGVPGAIFRFRFYDLIPVDEST------------------IDTVLHTLHPELERRLRRCPDPSSWPLFFEEFGVKGRV-QLLPKCDVRWSWVLDPV---QHDYALDEG--PNGLHAVMVHGE-----ALVESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLER 269
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|397643497|gb|EJK75900.1| (hypothetical protein THAOC_02359 [Thalassiosira oceanica]) HSP 1 Score: 92.0485 bits (227), Expect = 2.962e-17 Identity = 92/347 (26.51%), Postives = 132/347 (38.04%), Query Frame = 0 Query: 31 VLPRHNLLPPLAAVLCL--LLLLSRPDATTEAFVLHLRQAKQWRIQGGATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPL-ELAHGVLGNDSLF-CVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQ--------------------------LAQVVEELTGCSILWSV---CTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGF--CLVDS-QREANVRLKIEDDLLLTADMLSVNDRGTDCRTGE-----------LVYGNHQGLPYRMQR 330 V+PR P AV C LL SR + + R I + S FQG+FDN QV +R G+ G GGGHE IHC L P + G+ + A +YF+G P +FR R Y P + +DGS+ M+L+ +P E +RK + +EPC+ + +V L GC +LW + + + + E F M G +VDS R+ I+D+L L D +NDRG D GE VYGN +G+PY+++R Sbjct: 24 VVPR-----PALAVGCSDGLLAFSRASPHSNSKTARQRSTIVRTIAREVDCDKSSGEYFRRLTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTLVPCPDFGDDAEGDTRRSRWILAAFYFNGNPQQIFRFRAYQLWAPDH----DGMDDGSA-------VVRMKLNTLSPILEQALRKRS------EEPCSWWRTAWKVWSGEDKKKFHEDIIPWSQFIPSLVSPLQGCDVLWEEDWDAAKHSYLLDNAYNSDESNDITSFCDTSFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYD-PDGETDSMNENQDMPFVYGNRRGVPYKLER 347
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|1189391371|gb|OSX78305.1| (hypothetical protein BU14_0112s0004, partial [Porphyra umbilicalis]) HSP 1 Score: 86.6557 bits (213), Expect = 5.671e-17 Identity = 56/152 (36.84%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 87 LSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELTGCSILW 238 L F ++F G+FDN QV ERA G+ GGGHE IHC L LG+ LF A YYF+G P VFR R+Y P S P+ EMR++R + E +R YD+R L A V + L GC + W Sbjct: 11 LGEFLAWFAGDFDNHEQVVEERAAGLSPREGGGHEHIHCTLTS-------LGDGWLF---AKYYFNGDPSVVFRSRLYRVLPVVES---------------PVGLLEMRIYRLFAEAEASLRATGYDVRGLS---FTDADVYDWLQGCEVYW 134
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|551543674|ref|XP_005759987.1| (hypothetical protein EMIHUDRAFT_438591 [Emiliania huxleyi CCMP1516] >gi|485608189|gb|EOD07558.1| hypothetical protein EMIHUDRAFT_438591 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.7962 bits (190), Expect = 8.773e-13 Identity = 76/246 (30.89%), Postives = 98/246 (39.84%), Query Frame = 0 Query: 90 FRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELT--GCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRT-GELVYGNHQGLPYRMQRRR 332 F S F G FDN Q +R G GGGHE IHC L+PL L V A YYF+G P FR R+Y+ P + D E M++ R E +R + D + + + EEL GC + W R+ G F+GEM LV S + + D L L L VNDRG C T G +YGN + +PY+M R R Sbjct: 68 FLSQFCGHFDNLEQALEDRRAGRPPREGGGHEHIHCHLQPLALERPA--------VLANYYFNGDPARPFRQRLYTLQPTEARRSAADGE------------IRMQIFRLAEQVEAKLRAASGDAAAVAWDAER--DLAEELLIPGCDVFW----RRV-------------------GGHFEGEMATASALVHSPLLGR-EIVVTDHLHLWEGALWVNDRG--CGTDGTYLYGNTRDVPYKMDRVR 265
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|551582968|ref|XP_005776921.1| (hypothetical protein EMIHUDRAFT_443830 [Emiliania huxleyi CCMP1516] >gi|485629111|gb|EOD24492.1| hypothetical protein EMIHUDRAFT_443830 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.7962 bits (190), Expect = 1.025e-12 Identity = 76/246 (30.89%), Postives = 98/246 (39.84%), Query Frame = 0 Query: 90 FRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELT--GCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRT-GELVYGNHQGLPYRMQRRR 332 F S F G FDN Q +R G GGGHE IHC L+PL L V A YYF+G P FR R+Y+ P + D E M++ R E +R + D + + + EEL GC + W R+ G F+GEM LV S + + D L L L VNDRG C T G +YGN + +PY+M R R Sbjct: 68 FLSQFCGHFDNLEQALEDRRAGRPPREGGGHEHIHCHLQPLALERPA--------VLANYYFNGDPARPFRQRLYTLQPTEARRSAADGE------------IRMQIFRLAEQVEAKLRAASGDAAAVAWDAER--DLAEELLIPGCDVFW----RRV-------------------GGHFEGEMATASALVHSPLLGR-EIVVTDHLHLWEGALWVNDRG--CGTDGTYLYGNTRDVPYKMDRVR 265
BLAST of EWM26242.1 vs. NCBI_GenBank
Match: gi|298712633|emb|CBJ48658.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.0922 bits (170), Expect = 1.011e-10 Identity = 47/131 (35.88%), Postives = 59/131 (45.04%), Query Frame = 0 Query: 75 GGATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCV---LEPLELAHGVL-------GNDS-------------------------LFCVGATYYFDGRPDAVFRCRVYSFHPPP 170 GG + E D ++S FQGEFDN QV ++R G+ G GGGHE IHC L+P E+ V G+ S L V A YYF+G + VFR R+YSFH P Sbjct: 47 GGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPEQVAAAAAAPPGSRSSSGEEEEEEEEGAGQGAQQQQPEQPLAVVAAKYYFNGDSNVVFRYRLYSFHACP 177 The following BLAST results are available for this feature:
BLAST of EWM26242.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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