EWM26213.1, cds4415 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|585108212|gb|EWM26213.1| (hypothetical protein Naga_100025g68 [Nannochloropsis gaditana]) HSP 1 Score: 351.673 bits (901), Expect = 7.964e-123 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MASRGTPFRLEVDNCSCVAFSHRASRKSIHACLHFTISRPDTMSSLMATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDASQGEEATRVFKAMRVDRGGGAIDEQIARQNLGLQSYLDSIRESGKK 169
MASRGTPFRLEVDNCSCVAFSHRASRKSIHACLHFTISRPDTMSSLMATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDASQGEEATRVFKAMRVDRGGGAIDEQIARQNLGLQSYLDSIRESGKK
Sbjct: 1 MASRGTPFRLEVDNCSCVAFSHRASRKSIHACLHFTISRPDTMSSLMATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDASQGEEATRVFKAMRVDRGGGAIDEQIARQNLGLQSYLDSIRESGKK 169
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|673027226|ref|XP_008867574.1| (hypothetical protein H310_04836 [Aphanomyces invadans] >gi|574476347|gb|ETW03345.1| hypothetical protein H310_04836 [Aphanomyces invadans]) HSP 1 Score: 75.8702 bits (185), Expect = 5.370e-15 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSD 110
M VRD+ D H R KR+H+ RIPL P KAV VVYF+ P++ GYF+M WA ++KAE+ D
Sbjct: 1 MGVVRDFLDAHERLKKRIHSTRIPLGPKGKAVMTVVYFTTPIICGYFVMQWA--QSKAEVNLKD 62
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|698784617|ref|XP_009825352.1| (hypothetical protein H257_03100 [Aphanomyces astaci] >gi|574119855|gb|ETV85334.1| hypothetical protein H257_03100 [Aphanomyces astaci]) HSP 1 Score: 72.7886 bits (177), Expect = 8.031e-14 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSD 110
M RD+ D H R KR+H+ RIPL P KAV VYF+ P+V GYF+M WA ++KAE+ D
Sbjct: 1 MGVFRDFVDAHERLKKRIHSTRIPLGPKGKAVMTAVYFTTPIVCGYFVMQWA--QSKAEVNLKD 62
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|570984315|gb|ETP43953.1| (hypothetical protein F442_09412 [Phytophthora parasitica P10297]) HSP 1 Score: 67.0106 bits (162), Expect = 1.463e-11 Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDA 123
M +R +RH K++H+ RIPLS + V +VYF+ P++ GY++M WA +RA A Q EET IRR A
Sbjct: 1 MEFLRRLGERHEALKKKIHSTRIPLSKSGQRVMGLVYFTTPIIGGYYVMKWAENRADANFQ------REETEIRRAA 71
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|568018423|gb|ETL92597.1| (hypothetical protein L917_09134 [Phytophthora parasitica]) HSP 1 Score: 66.2402 bits (160), Expect = 2.443e-11 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDA 123
M +R +RH K++H+ RIPLS + V +VYF+ P++ GY++M WA RA A Q EET IRR A
Sbjct: 1 MEFLRRLGERHEALKKKIHSTRIPLSKSGQRVMGLVYFTTPIIGGYYVMKWAESRADANFQ------LEETEIRRAA 71
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|566023170|gb|ETI46081.1| (hypothetical protein F443_09497 [Phytophthora parasitica P1569] >gi|567960477|gb|ETK86034.1| hypothetical protein L915_09305 [Phytophthora parasitica] >gi|567989199|gb|ETL39464.1| hypothetical protein L916_09210 [Phytophthora parasitica] >gi|568048859|gb|ETM45887.1| hypothetical protein L914_09166 [Phytophthora parasitica] >gi|570326819|gb|ETO74767.1| hypothetical protein F444_09567 [Phytophthora parasitica P1976] >gi|570950645|gb|ETP15902.1| hypothetical protein F441_09442 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 65.855 bits (159), Expect = 3.587e-11 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDA 123
M +R +RH K++H+ RIPLS + V +VYF+ P++ GY++M WA RA A Q EET IRR A
Sbjct: 1 MEFLRRLGERHEALKKKIHSTRIPLSKSGQRVMGLVYFTTPIIGGYYVMKWAESRADANFQ------REETEIRRAA 71
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|299469900|emb|CBN76754.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.855 bits (159), Expect = 4.021e-11 Identity = 24/60 (40.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEI 106
M + D+ H+R +R+H FR+PLS P + +VYFSIP++ G+++M WA +RA+ +
Sbjct: 1 MGIMDDFSSGHQRLKERIHNFRMPLSRPGRIAMNIVYFSIPVIGGHYLMQWAQERAQVNL 60
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|669139182|ref|XP_008605159.1| (hypothetical protein SDRG_01413 [Saprolegnia diclina VS20] >gi|530743203|gb|EQC41445.1| hypothetical protein SDRG_01413 [Saprolegnia diclina VS20]) HSP 1 Score: 65.4698 bits (158), Expect = 5.063e-11 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQ--YSDSNEAEETRIRRDASQG 126
M +RD D H R KR+H RIPLSP +VVYF+ P++ GYF+M WA R+ A ++ ++ T + D+ +G
Sbjct: 1 MGWLRDLGDAHTRLKKRIHGTRIPLSPAGIRFMKVVYFTTPIIGGYFVMQWAQARSVANLRDLHAPPPTQNPTSYQNDSLKG 82
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|813109173|ref|XP_012194487.1| (hypothetical protein SPRG_00884 [Saprolegnia parasitica CBS 223.65] >gi|641541060|gb|KDO34823.1| hypothetical protein SPRG_00884 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 69.707 bits (169), Expect = 6.285e-11 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQ 107
M +RD D H R KR+H RIPLSP V +VVYF+ P++ GYF+M WA R+ A ++
Sbjct: 1 MGWLRDLSDAHTRLKKRIHGTRIPLSPAGIRVMKVVYFTTPIIGGYFVMQWAQARSAANLR 61
BLAST of EWM26213.1 vs. NCBI_GenBank
Match: gi|1214706741|gb|OWZ18241.1| (hypothetical protein PHMEG_0007710 [Phytophthora megakarya]) HSP 1 Score: 65.0846 bits (157), Expect = 8.243e-11 Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0
Query: 47 MATVRDWQDRHRRFVKRVHAFRIPLSPPAKAVAQVVYFSIPLVAGYFIMGWATDRAKAEIQYSDSNEAEETRIRRDAS 124
M R +RH K++H+ RIPLS + V +VYF+ P++ GY+IM WA RA A Q EET IRR A
Sbjct: 1 MEFFRQLGERHEALKKKIHSTRIPLSKNGQRVMGLVYFTTPIIGGYYIMKWAECRADANFQ------REETEIRRAAG 72 The following BLAST results are available for this feature:
BLAST of EWM26213.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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