EWM26199.1, cds4414 (CDS) Nannochloropsis gaditana

Overview
NameEWM26199.1
Unique Namecds4414
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:569565..570229 -

Link to JBrowse

Properties
Property NameValue
Start range569565
Start range.
Protein idEWM26199.1
Productglycerol kinase
Partialtrue
Orig transcript idgnl|cribi|Naga_100025g69.7490.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:569565..570229 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0016773phosphotransferase activity, alcohol group as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR018483Carb_kinase_FGGY_CS
IPR018484Carb_kinase_FGGY_N
Homology
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|585108198|gb|EWM26199.1| (glycerol kinase, partial [Nannochloropsis gaditana])

HSP 1 Score: 461.07 bits (1185), Expect = 2.216e-164
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MTSSYINSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDGQVHSGPCVAYPGGLSPSSLSSALRPPASPPSQAPSLSPDP 222
            MTSSYINSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDGQVHSGPCVAYPGGLSPSSLSSALRPPASPPSQAPSLSPDP
Sbjct:    1 MTSSYINSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDGQVHSGPCVAYPGGLSPSSLSSALRPPASPPSQAPSLSPDP 222          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|983536105|ref|WP_060687731.1| (glycerol kinase [Ardenticatena maritima] >gi|934113687|gb|KPL86352.1| glycerol kinase [Ardenticatena maritima])

HSP 1 Score: 236.498 bits (602), Expect = 4.504e-72
Identity = 107/177 (60.45%), Postives = 137/177 (77.40%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDG 182
            ++ YVGAIDQGT+ST+F++++HSG +V  HQLEH QIYPQ GWVEHDP+EIWA T   I+ AM+ A +DA  L A+G+TNQRE+T++WNK+TG PYYN IVW D RT  IC  L+  G    D FR KTGLPIATYFS  KI W+LDNV G+R+ AE+G+A+FG +D+W+I+ LT G
Sbjct:    1 MSKYVGAIDQGTTSTRFMVFDHSGLEVAKHQLEHEQIYPQAGWVEHDPLEIWARTQDVIKGAMQKAGLDASQLVAIGVTNQRETTVVWNKQTGKPYYNAIVWQDTRTDRICNQLERDGL--ADLFRRKTGLPIATYFSGPKIKWILDNVEGVREAAERGDALFGNIDTWIIWNLTGG 175          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|935662944|ref|WP_054494400.1| (glycerol kinase [Ardenticatena maritima] >gi|913352608|dbj|GAP64660.1| glycerol kinase [Ardenticatena maritima])

HSP 1 Score: 235.728 bits (600), Expect = 8.668e-72
Identity = 107/177 (60.45%), Postives = 137/177 (77.40%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDG 182
            ++ YVGAIDQGT+ST+F++++HSG +V  HQLEH QIYPQ GWVEHDP+EIWA T   I+ AM+ A +DA  L A+G+TNQRE+T++WNK+TG PYYN IVW D RT  IC  L+  G    D FR KTGLPIATYFS  KI W+LDNV G+R+ AE+G+A+FG +D+W+I+ LT G
Sbjct:    1 MSKYVGAIDQGTTSTRFMVFDHSGLEVAKHQLEHEQIYPQAGWVEHDPLEIWARTQDVIKGAMQKAGLDALQLVAIGVTNQRETTVVWNKQTGKPYYNAIVWQDTRTDRICNQLERDGL--ADLFRRKTGLPIATYFSGPKIKWILDNVEGVREAAERGDALFGNIDTWIIWNLTGG 175          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|1120034237|ref|WP_072908438.1| (glycerol kinase [Malonomonas rubra] >gi|1110047846|emb|SHJ29146.1| glycerol kinase [Malonomonas rubra DSM 5091])

HSP 1 Score: 229.18 bits (583), Expect = 2.974e-69
Identity = 103/175 (58.86%), Postives = 135/175 (77.14%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLT 180
            + +Y+ AIDQGT+S++ +I+NH+G+ V  HQLEH QIYP+PGWVEHD +EIW+ T   IR AM+   + A  + A+G+TNQRE+T++W+KKTG PYYN IVW D RT  IC +L   G  G DR REKTGLP+ATYFS  KI W+LDNV G+R  AE+G+A+FGT+DSW+I+KLT
Sbjct:    1 MANYIAAIDQGTTSSRCMIFNHAGEPVSSHQLEHEQIYPKPGWVEHDAVEIWSRTEEVIRTAMKKVELSATDIAAIGVTNQRETTVVWDKKTGQPYYNAIVWQDTRTDRICNEL--MGDVGQDRLREKTGLPLATYFSGPKISWILDNVAGVRQAAERGDALFGTMDSWIIWKLT 173          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|1011272642|ref|WP_062191275.1| (glycerol kinase [Anaerolinea thermolimosa] >gi|937431059|dbj|GAP06533.1| glycerol kinase [Anaerolinea thermolimosa])

HSP 1 Score: 228.409 bits (581), Expect = 5.538e-69
Identity = 108/201 (53.73%), Postives = 140/201 (69.65%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDGQVHSGPCVAYPGGLSPSSLSSALR 206
            ++ Y  +IDQGT+ST+F++++  G+ V L Q EH Q YPQPGWVEHDP+EIW  T   I  A+    +D + L A+GITNQRE+TL+WN+KTG PYY  IVW D RT  IC  L   G  G DRFRE+TGLP+ATYFS  K+ W+LDN+PG+R+DA KGEAIFGT+D+WLI+ LT G           GGL  + +++A R
Sbjct:    1 MSKYAASIDQGTTSTRFMVFDAHGEVVALEQREHQQFYPQPGWVEHDPLEIWQRTREVITTALNKFRIDPQDLVALGITNQRETTLVWNRKTGKPYYPAIVWQDTRTASICASLAEEG--GQDRFRERTGLPLATYFSGPKLKWILDNIPGVREDALKGEAIFGTIDTWLIWNLTGGPA---------GGLHMTDVTNASR 190          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|1176771788|gb|OQY89664.1| (glycerol kinase [Anaerolineae bacterium UTCFX2])

HSP 1 Score: 228.024 bits (580), Expect = 7.646e-69
Identity = 102/177 (57.63%), Postives = 134/177 (75.71%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDG 182
            +N++V +IDQGT+ST+ +++ HSG   G+ Q EH QIYPQPGWVEHDP+EIW NT   IR  + ++ V+   + ++G+TNQRE+TLIW+K+TG PYYN IVW D RT+ IC+ L  AG  G DRFR  TGLPIATYFS  K LW+L+N+PG+R  AE G A+FGT+D+WLI+ LT G
Sbjct:    1 MNAFVASIDQGTTSTRCMLFTHSGAVAGIAQKEHRQIYPQPGWVEHDPLEIWENTQQVIRDVLAASQVNPAAIVSIGVTNQRETTLIWDKRTGKPYYNAIVWQDTRTKEICDRLAAAG--GQDRFRRITGLPIATYFSGPKALWILENIPGVRQAAEAGHALFGTIDTWLIWWLTGG 175          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|1010954985|ref|WP_061914212.1| (glycerol kinase [Bellilinea caldifistulae] >gi|937444378|dbj|GAP09927.1| glycerol kinase [Bellilinea caldifistulae])

HSP 1 Score: 227.639 bits (579), Expect = 1.163e-68
Identity = 103/177 (58.19%), Postives = 131/177 (74.01%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDG 182
            +  Y  A+DQGT+ST+F+I++HSGQ VG+ Q EH QIYP+PGWVEHDPMEIW  T   I  A+  +NV+ + + AVG+TNQRE+T++W K TG P YN IVW D RT  IC +L   G  G DR R KTGLP+ATYFS  KI W+LDNVPG+R+ AEKGE +FG +D+W+I+ LT G
Sbjct:    1 MAKYAAAVDQGTTSTRFMIFDHSGQVVGVDQKEHEQIYPKPGWVEHDPMEIWKRTQEVIEGALRKSNVNPKDIAAVGVTNQRETTVVWEKATGKPVYNAIVWQDTRTDKICNELAADG--GQDRLRPKTGLPLATYFSGPKIKWILDNVPGVREKAEKGEVLFGNIDTWVIWNLTGG 175          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|1099518419|emb|SFQ22350.1| (glycerol kinase [Pseudarcicella hirudinis])

HSP 1 Score: 226.868 bits (577), Expect = 1.871e-68
Identity = 109/198 (55.05%), Postives = 141/198 (71.21%), Query Frame = 0
Query:    9 YVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDGQVHSGPCVAYPGGLSPSSLSSALR 206
            ++G+IDQGT+ST+FII++  G Q+ + Q EHAQIYPQ GWVEH+P EIW NT   I  A+  AN+    L A+GITNQRE+T++WNK TG+PYYN IVW D R   +  +L+  G  GIDRFREKTGLP+ATYFS  KI WLL+NV GLR+DAE GEAIFG +D+++I+ LT G           GGL  + +++A R
Sbjct:    2 FIGSIDQGTTSTRFIIFDKQGNQISVGQKEHAQIYPQAGWVEHNPDEIWQNTQEVIGLALGKANLSTHDLAAIGITNQRETTVVWNKTTGIPYYNAIVWQDTRVGNMVAELEKHG--GIDRFREKTGLPLATYFSGLKIKWLLENVEGLREDAEHGEAIFGNMDTFVIWHLTGGT---------DGGLHITDVTNASR 188          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|659867249|ref|WP_029914222.1| (glycerol kinase [Pelobacter seleniigenes])

HSP 1 Score: 226.868 bits (577), Expect = 2.093e-68
Identity = 107/177 (60.45%), Postives = 132/177 (74.58%), Query Frame = 0
Query:    6 INSYVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDG 182
            +  YV AIDQGT+S++ +I+NH+G+ V   QLEH QIYPQPGWVEHD +EIW+ T   I  A+E A + A  + AVGITNQRE+T++W+KKTG PYYN IVW D RT  IC  L   G  G DRFR KTGLP+ATYFS  KI WLLDNV GLR  AEKG+A+FG +D+W+++KLT G
Sbjct:    1 MAKYVAAIDQGTTSSRCMIFNHAGEPVSSSQLEHEQIYPQPGWVEHDAIEIWSRTKEVIHDALEKAGLVAADIAAVGITNQRETTVVWDKKTGQPYYNAIVWQDTRTDEICNKLAEDG--GQDRFRAKTGLPLATYFSGPKIKWLLDNVKGLRAAAEKGDALFGNMDTWILWKLTGG 175          
BLAST of EWM26199.1 vs. NCBI_GenBank
Match: gi|517272701|ref|WP_018461519.1| (glycerol kinase [Thermus oshimai])

HSP 1 Score: 226.483 bits (576), Expect = 3.044e-68
Identity = 100/175 (57.14%), Postives = 136/175 (77.71%), Query Frame = 0
Query:    9 YVGAIDQGTSSTKFIIYNHSGQQVGLHQLEHAQIYPQPGWVEHDPMEIWANTVTCIRRAMESANVDAELLEAVGITNQRESTLIWNKKTGVPYYNVIVWNDARTRGICEDLKTAGRRGIDRFREKTGLPIATYFSASKILWLLDNVPGLRDDAEKGEAIFGTLDSWLIYKLTDGQ 183
            Y+GA+DQGT+ST+F++++  G+++  HQLEH Q+YP+PGWVEHDP+EIWA T   I+ A+  A V    L A+GITNQRE+TL+WNK TG PY+N IVW D RT  ICE LK  G   +  FR+KTGLP++TYFS  K+ W+LD+VPG+R+ AE+G+A+FGT+D+WLI+ LT G+
Sbjct:    2 YIGALDQGTTSTRFMVFDRQGREIARHQLEHRQVYPRPGWVEHDPLEIWARTQEAIQGALAKAGVRPGELLAIGITNQRETTLVWNKNTGEPYHNAIVWQDTRTDAICEALKAEGLEEV--FRKKTGLPLSTYFSGPKLKWILDHVPGVREAAERGDALFGTVDTWLIWWLTGGR 174          
The following BLAST results are available for this feature:
BLAST of EWM26199.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108198|gb|EWM26199.1|2.216e-164100.00glycerol kinase, partial [Nannochloropsis gaditana... [more]
gi|983536105|ref|WP_060687731.1|4.504e-7260.45glycerol kinase [Ardenticatena maritima] >gi|93411... [more]
gi|935662944|ref|WP_054494400.1|8.668e-7260.45glycerol kinase [Ardenticatena maritima] >gi|91335... [more]
gi|1120034237|ref|WP_072908438.1|2.974e-6958.86glycerol kinase [Malonomonas rubra] >gi|1110047846... [more]
gi|1011272642|ref|WP_062191275.1|5.538e-6953.73glycerol kinase [Anaerolinea thermolimosa] >gi|937... [more]
gi|1176771788|gb|OQY89664.1|7.646e-6957.63glycerol kinase [Anaerolineae bacterium UTCFX2][more]
gi|1010954985|ref|WP_061914212.1|1.163e-6858.19glycerol kinase [Bellilinea caldifistulae] >gi|937... [more]
gi|1099518419|emb|SFQ22350.1|1.871e-6855.05glycerol kinase [Pseudarcicella hirudinis][more]
gi|659867249|ref|WP_029914222.1|2.093e-6860.45glycerol kinase [Pelobacter seleniigenes][more]
gi|517272701|ref|WP_018461519.1|3.044e-6857.14glycerol kinase [Thermus oshimai][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4425rna4425Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications