EWM26263.1, cds4408 (CDS) Nannochloropsis gaditana

Overview
NameEWM26263.1
Unique Namecds4408
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:557478..557909 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26263.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100145g7.9671.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:557478..557909 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008560DUF842_euk
Homology
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|553190947|ref|XP_005855298.1| (hypothetical protein NGA_2102500, partial [Nannochloropsis gaditana CCMP526] >gi|422293763|gb|EKU21063.1| hypothetical protein NGA_2102500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 296.975 bits (759), Expect = 1.056e-101
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query:    1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143
            MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL
Sbjct:   16 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 158          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|585108263|gb|EWM26263.1| (uncharacterized protein Naga_100145g7 [Nannochloropsis gaditana])

HSP 1 Score: 295.819 bits (756), Expect = 1.390e-101
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query:    1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143
            MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL
Sbjct:    1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|1126201077|ref|XP_019633876.1| (PREDICTED: protein FAM136A-like [Branchiostoma belcheri])

HSP 1 Score: 107.842 bits (268), Expect = 2.119e-27
Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 0
Query:    1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLA 136
            M D Q+R++  V T +  ++R YIRK+    + C A C D SS +  DV +C+  CS  L     L++NEL  FQ+RLQRC ++C+DEV+D + KAG      + QA+L  + ++CVG+C DTHL L+  ++++L 
Sbjct:    1 MADAQSRVEQGVKTLVTDIERDYIRKMQSKMFRCSATCCDDSSASMDDVGRCIDRCSQPLSRSQQLVTNELNEFQSRLQRCARTCQDEVQD-KMKAGN-----TNQAELTAMMEQCVGRCADTHLVLLPDIKSRLV 130          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|301110050|ref|XP_002904105.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096231|gb|EEY54283.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 99.7525 bits (247), Expect = 4.303e-24
Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 0
Query:    7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
            +LQ AV   +D+LDR  +R L ++ Y C A   ++ S++S+ +   V  C    Q++N  +  E+Q FQNR+QRC Q C+D+ +D+     GG P   Q A+ Q   D CVG+CVD+H+ L+  + +++
Sbjct:    5 KLQDAVDRMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSEQLAAAVERCQMPTQQLNQFMQQEMQTFQNRIQRCVQDCQDKAQDS--FPAGGNPSEKQIARAQKDMDTCVGRCVDSHVSLLPNISSRI 131          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|1214709864|gb|OWZ21006.1| (hypothetical protein PHMEG_0004499 [Phytophthora megakarya])

HSP 1 Score: 97.8265 bits (242), Expect = 1.912e-23
Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    6 ARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
            ++LQ AV   +D+LDR  +R L ++ Y C A   ++ S++S  +   V  C    Q++N  +  E+Q FQNR+QRC Q C+D+ +D+     GG P  +Q A+ Q   +KCV  CVD+H+ L+  + +++
Sbjct:    4 SKLQDAVNKMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSDQLAAAVERCQMPTQQLNQFMQQEMQNFQNRIQRCVQDCQDKAQDS--LPAGGNPSETQIARAQKDMEKCVNNCVDSHVSLLPTISSRI 131          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|675375520|gb|KFM68422.1| (hypothetical protein X975_19829, partial [Stegodyphus mimosarum])

HSP 1 Score: 97.8265 bits (242), Expect = 2.807e-23
Identity = 48/134 (35.82%), Postives = 82/134 (61.19%), Query Frame = 0
Query:    6 ARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPS-QQAKLQGI---YDKCVGKCVDTHLPLVNAMEAKL 135
            AR++ A+ + ++++DR+ +R +  N + C A C D+SS + Q+V QC+ +CS+ L E    + NEL  +Q+R+QRC   C+DE+RD        K  PS  +A+L G    ++ CV KC DTH+ L+ ++  ++
Sbjct:    7 ARVKEAINSMLEEIDRSCMRNMQGNMHKCAAKCCDNSSLSMQEVHQCIESCSSTLTEAQTFLQNELTNYQDRIQRCVMQCQDEIRD--------KITPSTTEAELSGFKKNFETCVVKCADTHINLIPSLTKRI 132          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|675183645|ref|XP_008900707.1| (hypothetical protein PPTG_08382 [Phytophthora parasitica INRA-310] >gi|566030632|gb|ETI53543.1| hypothetical protein F443_03527 [Phytophthora parasitica P1569] >gi|567968276|gb|ETK93419.1| hypothetical protein L915_03409 [Phytophthora parasitica] >gi|567996726|gb|ETL46828.1| hypothetical protein L916_03362 [Phytophthora parasitica] >gi|568025939|gb|ETL99940.1| hypothetical protein L917_03288 [Phytophthora parasitica] >gi|568098909|gb|ETN13627.1| hypothetical protein PPTG_08382 [Phytophthora parasitica INRA-310] >gi|570334279|gb|ETO82227.1| hypothetical protein F444_03595 [Phytophthora parasitica P1976] >gi|570958374|gb|ETP23353.1| hypothetical protein F441_03521 [Phytophthora parasitica CJ01A1] >gi|570994152|gb|ETP51344.1| hypothetical protein F442_03509 [Phytophthora parasitica P10297] >gi|970654419|gb|KUF92733.1| hypothetical protein AM588_10007253 [Phytophthora nicotianae])

HSP 1 Score: 97.0561 bits (240), Expect = 4.356e-23
Identity = 46/129 (35.66%), Postives = 77/129 (59.69%), Query Frame = 0
Query:    7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
            +LQ AV   +D+LDR  +R L ++ Y C A   ++ S++S+ +   V  C    Q++N  +  E+Q FQ+R+QRC Q C+D+ +D+     GG P   Q A+ Q   + CVG+CVD+H+ L+  + A++
Sbjct:    5 KLQDAVDKMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSEQLSAAVERCQMPTQQLNQFMQQEMQNFQHRIQRCVQDCQDKAQDS--LPAGGNPSEKQIARAQKDMETCVGRCVDSHVSLLPNISARI 131          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|443698097|gb|ELT98265.1| (hypothetical protein CAPTEDRAFT_220338 [Capitella teleta])

HSP 1 Score: 96.2857 bits (238), Expect = 9.050e-23
Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 0
Query:    1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
            M   QA++Q A+ T +  +D+ ++RK+  + Y C AAC +   Y   D Q+CV  CS  + +    I  EL  FQ+RLQRC   C+D+ RD      G     +Q A  +G  +KCV KC DTH+ LV +M  K+
Sbjct:    1 MESVQAKVQGAINTLITDIDKDHLRKMQASMYHCSAACCEKPHYNMDDTQRCVERCSGPITQAQQFIQTELGNFQDRLQRCAMDCQDKTRDKM----GPNTTEAQAASYRGDMEKCVMKCADTHVALVPSMMKKM 131          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|953489667|emb|CEG47033.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 96.2857 bits (238), Expect = 1.042e-22
Identity = 45/129 (34.88%), Postives = 76/129 (58.91%), Query Frame = 0
Query:    7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
            +LQ AV   +D+LDR  +R + ++ Y C A   ++++++S+ +   V  C    Q++N  +  E+Q FQNR+QRC Q C+D+ +D  A + GG P   Q  + Q   D CV +CVD+H+ L+  + A+ 
Sbjct:    5 KLQDAVDKMVDRLDRTLLRGIQRDGYLCAAKVFENNTWSSEQLAAAVERCQMPSQQLNQFLQQEMQNFQNRIQRCAQDCQDKAQD--ALSAGGNPSEKQIKRAQEDMDACVSRCVDSHISLLPNVSARF 131          
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|568056408|gb|ETM53120.1| (hypothetical protein L914_03387 [Phytophthora parasitica])

HSP 1 Score: 95.9005 bits (237), Expect = 1.498e-22
Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = 0
Query:    7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
            +LQ AV   +D+LDR  +R L ++ Y C A   ++ S++S+ +   +  C    Q++N  +  E+Q FQ+R+QRC Q C+D+ +D+     GG P   Q A+ Q   + CVG+CVD+H+ L+  + A++
Sbjct:    5 KLQDAVDKMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSEQLSAAMERCQMPTQQLNQFMQQEMQNFQHRIQRCVQDCQDKAQDS--LPAGGNPSEKQIARAQKDMETCVGRCVDSHVSLLPNISARI 131          
The following BLAST results are available for this feature:
BLAST of EWM26263.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553190947|ref|XP_005855298.1|1.056e-101100.00hypothetical protein NGA_2102500, partial [Nannoch... [more]
gi|585108263|gb|EWM26263.1|1.390e-101100.00uncharacterized protein Naga_100145g7 [Nannochloro... [more]
gi|1126201077|ref|XP_019633876.1|2.119e-2740.44PREDICTED: protein FAM136A-like [Branchiostoma bel... [more]
gi|301110050|ref|XP_002904105.1|4.303e-2436.43conserved hypothetical protein [Phytophthora infes... [more]
gi|1214709864|gb|OWZ21006.1|1.912e-2335.38hypothetical protein PHMEG_0004499 [Phytophthora m... [more]
gi|675375520|gb|KFM68422.1|2.807e-2335.82hypothetical protein X975_19829, partial [Stegodyp... [more]
gi|675183645|ref|XP_008900707.1|4.356e-2335.66hypothetical protein PPTG_08382 [Phytophthora para... [more]
gi|443698097|gb|ELT98265.1|9.050e-2337.78hypothetical protein CAPTEDRAFT_220338 [Capitella ... [more]
gi|953489667|emb|CEG47033.1|1.042e-2234.88Uncharacterized conserved protein [Plasmopara hals... [more]
gi|568056408|gb|ETM53120.1|1.498e-2234.88hypothetical protein L914_03387 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4418rna4418Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications