EWM26263.1, cds4408 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|553190947|ref|XP_005855298.1| (hypothetical protein NGA_2102500, partial [Nannochloropsis gaditana CCMP526] >gi|422293763|gb|EKU21063.1| hypothetical protein NGA_2102500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 296.975 bits (759), Expect = 1.056e-101 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query: 1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143
MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL
Sbjct: 16 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 158
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|585108263|gb|EWM26263.1| (uncharacterized protein Naga_100145g7 [Nannochloropsis gaditana]) HSP 1 Score: 295.819 bits (756), Expect = 1.390e-101 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query: 1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143
MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL
Sbjct: 1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|1126201077|ref|XP_019633876.1| (PREDICTED: protein FAM136A-like [Branchiostoma belcheri]) HSP 1 Score: 107.842 bits (268), Expect = 2.119e-27 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 0
Query: 1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLA 136
M D Q+R++ V T + ++R YIRK+ + C A C D SS + DV +C+ CS L L++NEL FQ+RLQRC ++C+DEV+D + KAG + QA+L + ++CVG+C DTHL L+ ++++L
Sbjct: 1 MADAQSRVEQGVKTLVTDIERDYIRKMQSKMFRCSATCCDDSSASMDDVGRCIDRCSQPLSRSQQLVTNELNEFQSRLQRCARTCQDEVQD-KMKAGN-----TNQAELTAMMEQCVGRCADTHLVLLPDIKSRLV 130
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|301110050|ref|XP_002904105.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096231|gb|EEY54283.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 99.7525 bits (247), Expect = 4.303e-24 Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 0
Query: 7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
+LQ AV +D+LDR +R L ++ Y C A ++ S++S+ + V C Q++N + E+Q FQNR+QRC Q C+D+ +D+ GG P Q A+ Q D CVG+CVD+H+ L+ + +++
Sbjct: 5 KLQDAVDRMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSEQLAAAVERCQMPTQQLNQFMQQEMQTFQNRIQRCVQDCQDKAQDS--FPAGGNPSEKQIARAQKDMDTCVGRCVDSHVSLLPNISSRI 131
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|1214709864|gb|OWZ21006.1| (hypothetical protein PHMEG_0004499 [Phytophthora megakarya]) HSP 1 Score: 97.8265 bits (242), Expect = 1.912e-23 Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = 0
Query: 6 ARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
++LQ AV +D+LDR +R L ++ Y C A ++ S++S + V C Q++N + E+Q FQNR+QRC Q C+D+ +D+ GG P +Q A+ Q +KCV CVD+H+ L+ + +++
Sbjct: 4 SKLQDAVNKMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSDQLAAAVERCQMPTQQLNQFMQQEMQNFQNRIQRCVQDCQDKAQDS--LPAGGNPSETQIARAQKDMEKCVNNCVDSHVSLLPTISSRI 131
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|675375520|gb|KFM68422.1| (hypothetical protein X975_19829, partial [Stegodyphus mimosarum]) HSP 1 Score: 97.8265 bits (242), Expect = 2.807e-23 Identity = 48/134 (35.82%), Postives = 82/134 (61.19%), Query Frame = 0
Query: 6 ARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPS-QQAKLQGI---YDKCVGKCVDTHLPLVNAMEAKL 135
AR++ A+ + ++++DR+ +R + N + C A C D+SS + Q+V QC+ +CS+ L E + NEL +Q+R+QRC C+DE+RD K PS +A+L G ++ CV KC DTH+ L+ ++ ++
Sbjct: 7 ARVKEAINSMLEEIDRSCMRNMQGNMHKCAAKCCDNSSLSMQEVHQCIESCSSTLTEAQTFLQNELTNYQDRIQRCVMQCQDEIRD--------KITPSTTEAELSGFKKNFETCVVKCADTHINLIPSLTKRI 132
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|675183645|ref|XP_008900707.1| (hypothetical protein PPTG_08382 [Phytophthora parasitica INRA-310] >gi|566030632|gb|ETI53543.1| hypothetical protein F443_03527 [Phytophthora parasitica P1569] >gi|567968276|gb|ETK93419.1| hypothetical protein L915_03409 [Phytophthora parasitica] >gi|567996726|gb|ETL46828.1| hypothetical protein L916_03362 [Phytophthora parasitica] >gi|568025939|gb|ETL99940.1| hypothetical protein L917_03288 [Phytophthora parasitica] >gi|568098909|gb|ETN13627.1| hypothetical protein PPTG_08382 [Phytophthora parasitica INRA-310] >gi|570334279|gb|ETO82227.1| hypothetical protein F444_03595 [Phytophthora parasitica P1976] >gi|570958374|gb|ETP23353.1| hypothetical protein F441_03521 [Phytophthora parasitica CJ01A1] >gi|570994152|gb|ETP51344.1| hypothetical protein F442_03509 [Phytophthora parasitica P10297] >gi|970654419|gb|KUF92733.1| hypothetical protein AM588_10007253 [Phytophthora nicotianae]) HSP 1 Score: 97.0561 bits (240), Expect = 4.356e-23 Identity = 46/129 (35.66%), Postives = 77/129 (59.69%), Query Frame = 0
Query: 7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
+LQ AV +D+LDR +R L ++ Y C A ++ S++S+ + V C Q++N + E+Q FQ+R+QRC Q C+D+ +D+ GG P Q A+ Q + CVG+CVD+H+ L+ + A++
Sbjct: 5 KLQDAVDKMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSEQLSAAVERCQMPTQQLNQFMQQEMQNFQHRIQRCVQDCQDKAQDS--LPAGGNPSEKQIARAQKDMETCVGRCVDSHVSLLPNISARI 131
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|443698097|gb|ELT98265.1| (hypothetical protein CAPTEDRAFT_220338 [Capitella teleta]) HSP 1 Score: 96.2857 bits (238), Expect = 9.050e-23 Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 0
Query: 1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
M QA++Q A+ T + +D+ ++RK+ + Y C AAC + Y D Q+CV CS + + I EL FQ+RLQRC C+D+ RD G +Q A +G +KCV KC DTH+ LV +M K+
Sbjct: 1 MESVQAKVQGAINTLITDIDKDHLRKMQASMYHCSAACCEKPHYNMDDTQRCVERCSGPITQAQQFIQTELGNFQDRLQRCAMDCQDKTRDKM----GPNTTEAQAASYRGDMEKCVMKCADTHVALVPSMMKKM 131
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|953489667|emb|CEG47033.1| (Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 96.2857 bits (238), Expect = 1.042e-22 Identity = 45/129 (34.88%), Postives = 76/129 (58.91%), Query Frame = 0
Query: 7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
+LQ AV +D+LDR +R + ++ Y C A ++++++S+ + V C Q++N + E+Q FQNR+QRC Q C+D+ +D A + GG P Q + Q D CV +CVD+H+ L+ + A+
Sbjct: 5 KLQDAVDKMVDRLDRTLLRGIQRDGYLCAAKVFENNTWSSEQLAAAVERCQMPSQQLNQFLQQEMQNFQNRIQRCAQDCQDKAQD--ALSAGGNPSEKQIKRAQEDMDACVSRCVDSHISLLPNVSARF 131
BLAST of EWM26263.1 vs. NCBI_GenBank
Match: gi|568056408|gb|ETM53120.1| (hypothetical protein L914_03387 [Phytophthora parasitica]) HSP 1 Score: 95.9005 bits (237), Expect = 1.498e-22 Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = 0
Query: 7 RLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKL 135
+LQ AV +D+LDR +R L ++ Y C A ++ S++S+ + + C Q++N + E+Q FQ+R+QRC Q C+D+ +D+ GG P Q A+ Q + CVG+CVD+H+ L+ + A++
Sbjct: 5 KLQDAVDKMVDRLDRTLLRGLQRDGYLCAAKVFENKSWSSEQLSAAMERCQMPTQQLNQFMQQEMQNFQHRIQRCVQDCQDKAQDS--LPAGGNPSEKQIARAQKDMETCVGRCVDSHVSLLPNISARI 131 The following BLAST results are available for this feature:
BLAST of EWM26263.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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