EWM26268.1, cds4403 (CDS) Nannochloropsis gaditana

Overview
NameEWM26268.1
Unique Namecds4403
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:544596..546215 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26268.1
Productglutamyl-trna amidotransferase subunit a
Orig transcript idgnl|cribi|Naga_100145g14.9676.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:544596..546215 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0016884carbon-nitrogen ligase activity, with glutamine as amido-N-donor
Vocabulary: Cellular Component
TermDefinition
GO:0009536plastid
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR020556Amidase_CS
IPR000120Amidase
IPR004412GatA
IPR023631Amidase_dom
Homology
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|585108268|gb|EWM26268.1| (glutamyl-trna amidotransferase subunit a [Nannochloropsis gaditana])

HSP 1 Score: 1073.92 bits (2776), Expect = 0.000e+0
Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 0
Query:    1 MSFLLTSRRKPLLLLVLAVLAKAKAFQSGSVGKYHSKKHLSTRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELTSTD 539
            MSFLLTSRRKPLLLLVLAVLAKAKAFQSGSVGKYHSKKHLSTRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELTSTD
Sbjct:    1 MSFLLTSRRKPLLLLVLAVLAKAKAFQSGSVGKYHSKKHLSTRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELTSTD 539          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|873221160|emb|CEM34011.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 483.797 bits (1244), Expect = 1.055e-162
Identity = 269/506 (53.16%), Postives = 354/506 (69.96%), Query Frame = 0
Query:   37 KKHL-STRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKE----AETRGERPLAGTRIGLIRETL---QTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLR-----PRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQV 529
            ++H  S R  S+++I    + I+ G ++V EV + TL ++EA D  +  + ++ G+ A+S AR LD+   GR       PL GLP+A+KD I    +P T GS+VL+GYVPS+DA  V RL+AAGAV++GKTN DEF MGSTTE+S +  T NP DLSR+PGGSSGGS+A V++G V AALG+DTGGSIRQPASW G VGLKPTYGRVSR GLLAYGSSTD IGP+  +V D A LL A+AG DPL D ++  AP  E Y   V +     E+   RPL+  RIGL++ETL   + R++  V    +D+++  + LGAE++EV IP L  +CA+YY+ V+SEAS+NLA+YDG+RYGLR     PR    AK VM+ SR  GFG+EVKQRILLGTF+LSAGY+DAYY K+Q++R+ L+  F+  FE  D LI PTAPT AY LG+   +KV+ Y DDL TVPASL+GLPA+S+P G       S++ LP+GLQI+G+   E  +LQ+
Sbjct:   43 RRHTRSGRPLSASSIAQTTKGIRDGTLTVEEVVRDTLRRVEASD--VHGWCSVDGESALSRARELDK---GRANEGDLPPLYGLPIAVKDTISVRDMPCTGGSRVLEGYVPSFDAPCVERLKAAGAVVIGKTNCDEFAMGSTTETSFFEQTVNPFDLSRTPGGSSGGSSAVVSNGEVPAALGSDTGGSIRQPASWCGVVGLKPTYGRVSRRGLLAYGSSTDCIGPMCTSVEDCAILLEAMAGHDPL-DVSSLDAPVPE-YAKLVDQFLNNKESLSGRPLSKMRIGLLKETLDDGEGRMQPAVMAAFKDSLSVFKALGAELIEVDIPNLKEYCAAYYITVMSEASSNLAKYDGIRYGLRTSSEDPR----AKRVMVDSRETGFGQEVKQRILLGTFALSAGYSDAYYKKAQKMRAALASNFERVFELVDALILPTAPTTAYRLGQFKENKVETYIDDLLTVPASLSGLPALSVPCG------ISAEDLPIGLQIVGKPLDELRLLQI 531          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|939700542|ref|WP_054936681.1| (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [Moorella glycerini] >gi|808566692|emb|CEP67527.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Moorella glycerini])

HSP 1 Score: 450.669 bits (1158), Expect = 6.083e-151
Identity = 244/487 (50.10%), Postives = 337/487 (69.20%), Query Frame = 0
Query:   49 TIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLA-GREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILE 534
            T H++ + +Q+ ++S  EVT+  + +IEA D  + A+LT + +QA+++A+A+D   A G EPG    PL G+PMA+KDN+CT GI TT  S++L  +VP YDA  V RL+AAGAV++GK N+DEF MGS+TE+SG+  TRNP DL R PGGSSGGS AAVA+G    ALG+DTGGSIRQPAS+ G VG+KPTYGRVSR+GL+A+ SS D IGP+T  V D A ++  +AG DP  D+T++  P   DY +A+K         + G +IG+ RE     +E  V TVV+ A+ARLE +GA   E S+P+ +    +YY+   +EAS+NLARYDGV YGLR       +  M  +R +GFG EVK+RI+LGT++LS+GY DAYYLK+ ++R+++   F++AF   D+L +PT+PTVA+ LG+ AG  + MY  DL T+P ++AGLPA+SLP G        S  LPVGLQ+IG+ F EA++L+VA   E
Sbjct:    7 TAHELGDLLQRREVSAVEVTEAIVDRIEAVDGQVQAYLTRTAEQALAQAKAIDAARARGEEPG----PLAGVPMALKDNLCTEGIRTTCASRMLADWVPPYDAAVVQRLKAAGAVMLGKLNMDEFAMGSSTENSGFFPTRNPWDLERVPGGSSGGSVAAVAAGEACYALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPITRDVTDCALVMGVIAGHDPC-DSTSAELPVP-DYRAALKPE-------IKGLKIGVPREYFGAGMEPEVETVVRRAIARLEEMGAICEETSLPHTEFALPAYYLVAPAEASSNLARYDGVGYGLRVPGKDIIEMYM-NTRSQGFGPEVKRRIMLGTYALSSGYYDAYYLKALKVRTLIRRDFEAAFAKYDLLATPTSPTVAFRLGEKAGDPLAMYLSDLCTIPINMAGLPALSLPCG-------FSQGLPVGLQLIGKAFDEATLLRVAYAFE 472          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|545354671|ref|XP_005643169.1| (glutamyl tRNA amidotransferase, subunit A [Coccomyxa subellipsoidea C-169] >gi|384245130|gb|EIE18625.1| glutamyl tRNA amidotransferase, subunit A [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 453.751 bits (1166), Expect = 9.683e-151
Identity = 256/487 (52.57%), Postives = 332/487 (68.17%), Query Frame = 0
Query:   51 HDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELTS 537
            HD+  + +    S  E+T+Q L Q+EA +  I +F+T++ + A   AR LD+++A RE  +   PL G+P  IKD +CTAG+ TTAG++VL+GYVPSYDATAVARL+AAGAV++GKTN D F MGSTTESS Y VTRNP DL R PGGSSGGSAAAVA+   +  LG+DTGGSIRQPA + G VG+KPTYGRVSR GL+AYGSS D +GPL  TV D+A +LS +AG D L DAT+S  P A+DY   + +A +   RPLAG RIG+IRET    V  GVS     A   LE LGA++ EVS+P  DA   +YYV   SEAS+NL+R+DGVRYGL  +   + + +   +RGEG   EVK+RIL+GT++LSAGY DAYY ++ Q+R+++     +A    D LISP APT AY +G+     ++MY  DL TV  +LAGLPA+ +P G      +    LPVGLQIIG+ F EA ++ +  I E T 
Sbjct:  100 HDLRSKAR----SAVEITEQYLEQLEAAEPQIRSFITVAAESARLSARQLDDRIA-REGASGLGPLAGVPFGIKDTLCTAGVETTAGARVLKGYVPSYDATAVARLKAAGAVMIGKTNCDAFAMGSTTESSDYQVTRNPWDLDRVPGGSSGGSAAAVAADQCVGTLGSDTGGSIRQPAHFCGVVGIKPTYGRVSRSGLIAYGSSLDCVGPLARTVEDAALMLSTIAGRDDL-DATSSPRP-AQDYAEGLPQASSLSSRPLAGKRIGIIRETTGAGVAAGVSDAFARAARHLESLGADVDEVSLPSSDAGLPAYYVIATSEASSNLSRFDGVRYGLH-KQVANIRELYNETRGEGLNAEVKRRILMGTYALSAGYYDAYYKRALQVRTLVQRELYAALAEHDALISPAAPTAAYRIGQVNSDPLEMYKGDLMTVNINLAGLPAMVVPCGFEEGGGSQGQALPVGLQIIGRAFGEADMITIGHIFEQTC 578          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|1004139007|gb|KXZ47016.1| (hypothetical protein GPECTOR_38g252 [Gonium pectorale])

HSP 1 Score: 449.129 bits (1154), Expect = 1.076e-149
Identity = 275/511 (53.82%), Postives = 346/511 (67.71%), Query Frame = 0
Query:   36 SKKHLSTRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTM-PLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETR---GERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASS-----DFLPVGLQIIGQRFAEASILQVARILELTS 537
            SK   S     S+ I ++ E I   Q S  EVT+  L  I   D A+ +F+T+  +QA+++ARALD  +A    GT  + PL G+P+AIKDNICT G  TTAGS++L+ YVP +DATAVARLR AGAV VGKTN+DEFGMGS+TE+S Y  TRNP D  R PGGSSGGSAAAVA+     ALG+DTGGSIRQPA + G VGLKPTYGRVSR+GL++Y SS D IGP+T TV D+A LL+A+AG DP HDAT+S   AAED+ + +   E     G RPLAG RIGL+RETL   VE  V   V+ A A LE LGA + EVS+P       +YYV  LSEAS+NL+RYDGVRYG R   A    ++  GSRG G G EVK+RIL+GT++LSAGY DAYY ++QQ+R+++     SA E  D L++PTAP  AY LG+ +   + MY  DL TV  +LAGLPAI LP G  P+   +S       LP+G+Q+IG+ F EA +LQ+A   E T+
Sbjct:   24 SKHTTSLASAKSSVIREIHEHIVSKQRSAVEVTQHYLDAIGKADSAVCSFITVDAEQALAQARALDAHIASS--GTDGLGPLTGVPLAIKDNICTQGTRTTAGSQILRDYVPPFDATAVARLRGAGAVFVGKTNMDEFGMGSSTENSSYKPTRNPWDPERVPGGSSGGSAAAVAARECAGALGSDTGGSIRQPAHFCGIVGLKPTYGRVSRYGLISYASSLDCIGPMTHTVEDAALLLNAIAGGDP-HDATSS-GRAAEDFAARLLPPEQLGGGGSRPLAGRRIGLVRETLGEGVEPAVEAAVRGAAAHLESLGAVVEEVSLPTFGLGLPAYYVLALSEASSNLSRYDGVRYGARAPGAADLASLYGGSRGGGLGGEVKRRILMGTYALSAGYYDAYYKRAQQVRTLVQSEMGSALERFDALLTPTAPGPAYRLGEKSADPLAMYKGDLMTVNVNLAGLPAIVLPAGYTPAPEPASGGPGHGQLPIGMQLIGRAFDEAGLLQLAHAYEQTA 530          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|1082915063|gb|OGC22976.1| (aspartyl/glutamyl-tRNA amidotransferase subunit A [candidate division WOR-1 bacterium RIFOXYA2_FULL_41_14] >gi|1082915702|gb|OGC23595.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [candidate division WOR-1 bacterium RIFOXYB2_FULL_42_35] >gi|1082925826|gb|OGC33559.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [candidate division WOR-1 bacterium RIFOXYC2_FULL_41_25])

HSP 1 Score: 446.047 bits (1146), Expect = 2.748e-149
Identity = 238/490 (48.57%), Postives = 336/490 (68.57%), Query Frame = 0
Query:   45 FSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILE 534
             ++ T H++   ++  +IS  E+T+    QIE  +  + AF+TL+ ++A+ +A+A DE++   E   +  PL G+P+AIKDN+CT GI TT  SK+L  Y+P Y+AT V +L+ AGA++VGKTN+DEF MGS+TE+SG H T NP +L+  PGGSSGGSAAAVA+   + A G+DTGGSIRQPA++ G VGLKPTYGRVSR+GL+A+ SS D IGPLT  V D+A +L+ ++G DP    +TS+  +  DY  ++          + G +IG I+E L   ++  V   ++ A+ +L  LGAE++EVS+P  +A  A+YY+   +EAS+NLARYDGV++G R ++A    T+   +R EGFG EVK+RILLGT++LSAGY DAYYLK+ ++R+++ + F  AF   DVLISPTAPTVA+ +G+     + MY  D+ T+P +LAGLP ISLP G        S+ LPVGLQIIG+ FAE +IL+VA   E
Sbjct:    1 MNNKTAHELHNELKNKKISSVELTEAVFAQIEKVESKVQAFVTLTKEEALKQAKAADERI---ENNHNLTPLTGIPIAIKDNMCTKGILTTCSSKILSNYLPPYNATIVEKLKEAGAIMVGKTNMDEFAMGSSTENSGLHPTNNPWNLNTVPGGSSGGSAAAVAADECILATGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPLTKDVTDTATVLNIISGHDP--KDSTSVNISVPDYQKSLINN-------IKGLKIGYIKELLGKGIDKEVKVTIEKAMKKLAELGAELIEVSMPSFEAAVATYYLIAPAEASSNLARYDGVKFGHRSKEAKDLLTMYYNTRQEGFGTEVKRRILLGTYALSAGYYDAYYLKALKVRTLIKQDFDKAFAECDVLISPTAPTVAFKIGEKTADPLSMYLSDIATIPVNLAGLPGISLPCG-------FSNNLPVGLQIIGKAFAEETILRVAFTYE 471          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|1082898873|gb|OGC07390.1| (aspartyl/glutamyl-tRNA amidotransferase subunit A [candidate division WOR-1 bacterium RIFOXYA2_FULL_36_21] >gi|1082905806|gb|OGC13981.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [candidate division WOR-1 bacterium RIFOXYB2_FULL_36_35] >gi|1082908544|gb|OGC16604.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [candidate division WOR-1 bacterium RIFOXYA12_FULL_36_13])

HSP 1 Score: 440.654 bits (1132), Expect = 3.126e-147
Identity = 234/492 (47.56%), Postives = 341/492 (69.31%), Query Frame = 0
Query:   47 STTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELTST 538
            + T H++ + + + +IS AE+T++    IE+ +  I A++TL+ ++A+++AR  DE++  ++   +  PL G+P+AIKDN+CT GI TT  S++L  YV  YDAT V +L+  GAV++GKTNLDEF MGS+TE+SG H+T+NPRDL   PGGSSGGSAAAVA+   + A G+DTGGSIRQPAS+ G VGLKPTYGR+SR+GL+A+ SS D IGPL   V D+A LL  +AG DP  D+T+   P     V   +E+ T     + G +IG+I+E ++  + + V   ++ A+ + E LGA + EVS+P  +   ++YY+   +EAS+NLAR+DGV+YG R ++A    T+   +R EGFG EVK+RI+LGT++LSAGY DAYYLK+ ++R+++ + F+ AFE  DVLISPT+PTVA+ +G+ A   + MY  D+ T+P +LAG+PAIS+P G A       + LP+GLQI+G+ F E +IL+ A   E  +T
Sbjct:    3 NKTAHELHDLLIEKKISSAELTEKVFAHIESVEPQIKAYITLTKEEALNQARIADEQIQTKK---NITPLTGIPIAIKDNMCTKGILTTCASRILANYVSPYDATIVTKLKETGAVIIGKTNLDEFAMGSSTENSGMHITKNPRDLECVPGGSSGGSAAAVAANEAILATGSDTGGSIRQPASFCGIVGLKPTYGRISRYGLVAFASSLDQIGPLAKDVTDAAMLLQVMAGYDP-KDSTSVDMP-----VPNYRESLTTN---IKGLKIGVIKELMEEGISEDVKFAIKSAIKKYEELGAVLSEVSLPSFEYAVSTYYLIAPAEASSNLARFDGVKYGHRSQEAKDLITMYYNTRREGFGPEVKRRIILGTYALSAGYYDAYYLKALKVRTLIKQDFERAFEQCDVLISPTSPTVAFKIGEKANDPLSMYLSDIATIPVNLAGIPAISIPCGNA-------NNLPIGLQIMGKAFDEETILKAAYAYEQNTT 475          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|159464645|ref|XP_001690552.1| (glutamyl tRNA amidotransferase, subunit A [Chlamydomonas reinhardtii] >gi|158280052|gb|EDP05811.1| glutamyl tRNA amidotransferase, subunit A [Chlamydomonas reinhardtii])

HSP 1 Score: 439.499 bits (1129), Expect = 5.209e-146
Identity = 249/500 (49.80%), Postives = 333/500 (66.60%), Query Frame = 0
Query:   38 KHLSTRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELTS 537
            KH        + I ++ E++   + S  EVT+Q L  I   D  + +++T+ G+QA+++ARA+D ++A    G +  PL G+P+AIKDNICT+G  TTAGS++L+ YVP++DATAV+RLR AGAV +GKTN+DEFGMGS+TE+S +  TRNP D  R PGGSSGGSAAAVA+    AALG+DTGGSIRQPA + G VGLKPTYGRVSR+GL++Y SS D IGP+  TV D+A LLS +AG D  HDAT+S  P  +            G RPLAG RIGL+ +T+   V   +   V+ A   LE LGA + EVS+P       +YYV  LSEAS+NL+RYD VRYG R   A    ++  GSR EG G EVK+RIL+GT++LSAGY DAYY ++QQ+R+++ +   +A    D L+SP AP+ AY LG+ +   + MY  DL TV  +LAGLPA+ LP G  P S+     LP+GLQ++G+ F EA +L +    E T+
Sbjct:   25 KHTVAASSKQSVIREIHEQLSNKKRSAVEVTQQYLDAIARTDSTVCSYITVDGEQALAQARAVDARIAA---GETLGPLAGVPLAIKDNICTSGTRTTAGSQILRDYVPNFDATAVSRLRGAGAVFLGKTNMDEFGMGSSTENSSFKPTRNPWDAERVPGGSSGGSAAAVAAHECAAALGSDTGGSIRQPAHFCGIVGLKPTYGRVSRYGLISYASSLDCIGPMAHTVEDAALLLSGIAGGDS-HDATSSGRPVVDFAAGLATGLAAGGSRPLAGKRIGLVAQTMGEGVAPAIDEAVRAAARHLESLGATVEEVSLPTFGQGLPAYYVLALSEASSNLSRYDSVRYGARSPAATDLASLFAGSRAEGLGGEVKRRILMGTYALSAGYYDAYYKRAQQVRTLVQQEMVAALGRCDALLSPAAPSAAYKLGEKSSDPLAMYKGDLMTVNVNLAGLPALVLPAGFVPGSAEGGAELPIGLQLVGRAFDEAGLLGLGYAYEQTA 520          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|168046765|ref|XP_001775843.1| (predicted protein [Physcomitrella patens] >gi|162672850|gb|EDQ59382.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 437.958 bits (1125), Expect = 1.066e-145
Identity = 251/502 (50.00%), Postives = 340/502 (67.73%), Query Frame = 0
Query:   36 SKKHLSTRVFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLG-SRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILELT 536
            S+  L++R    + I  + E +  G+ S  E+T+  L +++  +  + +FL +S ++A+ +A+ LD ++A    G    PL G+P+ +KDN+CT  +P+T GS++L+GY P YDATAVA+LR++GA+LVGKTN+DEFGMGS+TE S Y VT NP DLSR PGGSSGGSAAAVA+G    ALG+DTGGSIRQPAS+ G VGLKP+YGRVSR GL+AY SS DV+G    +VMD+A LL A+AGAD  +D+T S      DY S +   +    RPLAG R G+I ET+   V++ V + ++ A A LE LGA + EV++P       +YYV   SEAS+NLARYDGVRYG  PR  G     M G SR +GFG EVK+RIL+GT++LSAGY DA+Y K+QQ+R+V+ + FK+A +  D+LISP APT AY + +     + MY  DL TV  +LAGLPA+ +P G A   +     LPVGLQ+IG  F E ++L++  I E T
Sbjct:    2 SESSLASRQSPVSVIRKIRESLVTGEKSAVEITETYLEKLKEREPHVRSFLHVS-EKALQDAQELDRRIA---EGGEVGPLAGVPLGVKDNLCTRDMPSTGGSQILRGYCPPYDATAVAKLRSSGAILVGKTNMDEFGMGSSTEGSAYQVTSNPWDLSRVPGGSSGGSAAAVAAGQCAGALGSDTGGSIRQPASFCGVVGLKPSYGRVSRFGLMAYASSLDVVGCFGNSVMDAAILLEAIAGADK-NDSTCS-PQGVPDYTSKLLPVDNLDSRPLAGIRFGIITETVGDGVDEDVVSAIRQAAAHLESLGASVREVAMPNFSLGLPAYYVLATSEASSNLARYDGVRYG--PRAHGEEVMSMYGNSRAQGFGSEVKRRILMGTYALSAGYYDAFYKKAQQVRTVIQQDFKNALQEVDLLISPVAPTPAYKIDEKMNDPLAMYVGDLMTVNVNLAGLPALVVPCGLAKGGTCG---LPVGLQMIGPAFGEDNLLRLGHIFEQT 492          
BLAST of EWM26268.1 vs. NCBI_GenBank
Match: gi|1022614099|ref|WP_063395847.1| (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [Prochlorococcus sp. MIT 1306] >gi|1022134284|gb|KZR64123.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Prochlorococcus sp. MIT 1306])

HSP 1 Score: 436.802 bits (1122), Expect = 1.287e-145
Identity = 247/482 (51.24%), Postives = 330/482 (68.46%), Query Frame = 0
Query:   50 IHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETL-QTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVA 530
            I +  ++++ G++S  E+T   L +I A D  + AFL ++ ++A ++A  +DE LA    G S  PL G+P+AIKDN+CT GI TT  S++L+ +VP Y++T   RL  AGAVL+GKTNLDEF MGS+TE+S +  T NP D+SR PGGSSGGSAAAVA+G  +AALG+DTGGSIRQPAS+ G VGLKPTYGRVSR GL+A+ SS D +GP T  V D+A LL  +AG+DP    +T L  A  DY SA+ +       P++G RIGLIRE   Q  ++  V   V  A  +L+ LGAE++EVS P      A+YYV   SEASANLARYDGV+YG R   A +  ++   SR EGFG EV++RIL+GT++LSAGY DAYY K+QQ+R+++ + F +AF+T DVL++PT+PT A+ +G  A   + MY  DL T+PA+LAGLPAISLP G         D LP+G+Q+I     E+ +LQVA
Sbjct:    3 IAEWRQQLKLGEVSARELTDHQLARIAAVDPTLHAFLDVTAERARADADRIDEALAA---GESLPPLAGVPLAIKDNLCTKGIRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFAMGSSTETSAFGATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRD--STCLNVAVPDYCSALSQ-------PMSGVRIGLIRECFDQNGLDAQVKRTVLAAAEKLQSLGAELVEVSCPRFSDGIATYYVIAPSEASANLARYDGVKYGYRAEGADALASMTARSRAEGFGSEVQRRILIGTYALSAGYMDAYYKKAQQVRTLIRQDFDAAFQTVDVLLTPTSPTTAFQVGAHADDPLAMYLADLLTIPANLAGLPAISLPCG------FDDDGLPIGVQLIANVLEESRLLQVA 466          
The following BLAST results are available for this feature:
BLAST of EWM26268.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108268|gb|EWM26268.1|0.000e+0100.00glutamyl-trna amidotransferase subunit a [Nannochl... [more]
gi|873221160|emb|CEM34011.1|1.055e-16253.16unnamed protein product [Vitrella brassicaformis C... [more]
gi|939700542|ref|WP_054936681.1|6.083e-15150.10Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCA... [more]
gi|545354671|ref|XP_005643169.1|9.683e-15152.57glutamyl tRNA amidotransferase, subunit A [Coccomy... [more]
gi|1004139007|gb|KXZ47016.1|1.076e-14953.82hypothetical protein GPECTOR_38g252 [Gonium pector... [more]
gi|1082915063|gb|OGC22976.1|2.748e-14948.57aspartyl/glutamyl-tRNA amidotransferase subunit A ... [more]
gi|1082898873|gb|OGC07390.1|3.126e-14747.56aspartyl/glutamyl-tRNA amidotransferase subunit A ... [more]
gi|159464645|ref|XP_001690552.1|5.209e-14649.80glutamyl tRNA amidotransferase, subunit A [Chlamyd... [more]
gi|168046765|ref|XP_001775843.1|1.066e-14550.00predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1022614099|ref|WP_063395847.1|1.287e-14551.24Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCA... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4413rna4413Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications