EWM30218.1, cds440 (CDS) Nannochloropsis gaditana

Overview
NameEWM30218.1
Unique Namecds440
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1085981..1085989 +
Alignment locationCM002455.1:1086681..1089035 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30218.1
ProductRAP domain protein
Orig transcript idgnl|cribi|Naga_100003g41.1735.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1085981..1085989 +
CM002455.1supercontigCM002455.1:1086681..1089035 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR013584RAP
Homology
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|585112877|gb|EWM30218.1| (RAP domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1617.82 bits (4188), Expect = 0.000e+0
Identity = 787/787 (100.00%), Postives = 787/787 (100.00%), Query Frame = 0
Query:    1 MRGRHFCPAVAALSQHTMVEFPGHGMYSRGAQTNESPHRTTSSRRRPRQRTVANVMVKWCSVTALFGGLQQLSRGDAFQSTCSGSSPGLPRVRCNAPRPVFLPPLFSSFAGSSDGSFDMSFDEFFRSETSNGNACTPGTSTTWRDLASHRAPGTPPPRFPRHRQQLGSPLSPPASPALAETTDVALPSDPQRPQAARPPLPGRLGAGFQLGDWRASKEESQHTQSLILQAQSEPADMLRLLLDNPSCCNHVNVCTVLHRCARLAGTPRLTPAIEATITQSLLPVVAEVLPACKGRQLCNLAWSLVRLGMPDEALFDATIDRLQERQGGLLEACNAGELAMVLWAIASAGLTFQHASFFERAAGSLAELAVGLRPREIGLITWAYATWLGNDLKLNGQQQRGMGAGGLGGWESCDAVEGEAGAGWAAGLPGPSGRKWLVAPMVSLLEATLQVEADLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRLPYFTPTELANVAWALTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDIDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787
            MRGRHFCPAVAALSQHTMVEFPGHGMYSRGAQTNESPHRTTSSRRRPRQRTVANVMVKWCSVTALFGGLQQLSRGDAFQSTCSGSSPGLPRVRCNAPRPVFLPPLFSSFAGSSDGSFDMSFDEFFRSETSNGNACTPGTSTTWRDLASHRAPGTPPPRFPRHRQQLGSPLSPPASPALAETTDVALPSDPQRPQAARPPLPGRLGAGFQLGDWRASKEESQHTQSLILQAQSEPADMLRLLLDNPSCCNHVNVCTVLHRCARLAGTPRLTPAIEATITQSLLPVVAEVLPACKGRQLCNLAWSLVRLGMPDEALFDATIDRLQERQGGLLEACNAGELAMVLWAIASAGLTFQHASFFERAAGSLAELAVGLRPREIGLITWAYATWLGNDLKLNGQQQRGMGAGGLGGWESCDAVEGEAGAGWAAGLPGPSGRKWLVAPMVSLLEATLQVEADLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRLPYFTPTELANVAWALTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDIDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD
Sbjct:    1 MRGRHFCPAVAALSQHTMVEFPGHGMYSRGAQTNESPHRTTSSRRRPRQRTVANVMVKWCSVTALFGGLQQLSRGDAFQSTCSGSSPGLPRVRCNAPRPVFLPPLFSSFAGSSDGSFDMSFDEFFRSETSNGNACTPGTSTTWRDLASHRAPGTPPPRFPRHRQQLGSPLSPPASPALAETTDVALPSDPQRPQAARPPLPGRLGAGFQLGDWRASKEESQHTQSLILQAQSEPADMLRLLLDNPSCCNHVNVCTVLHRCARLAGTPRLTPAIEATITQSLLPVVAEVLPACKGRQLCNLAWSLVRLGMPDEALFDATIDRLQERQGGLLEACNAGELAMVLWAIASAGLTFQHASFFERAAGSLAELAVGLRPREIGLITWAYATWLGNDLKLNGQQQRGMGAGGLGGWESCDAVEGEAGAGWAAGLPGPSGRKWLVAPMVSLLEATLQVEADLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRLPYFTPTELANVAWALTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDIDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|299472343|emb|CBN77531.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 201.06 bits (510), Expect = 3.107e-51
Identity = 120/333 (36.04%), Postives = 177/333 (53.15%), Query Frame = 0
Query:  455 LQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRL--PYFTPTELANVAWALTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDIDILLPEHG----------------------------VALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRK 757
            L  +D+AM++W F  ++  +     P       VLA AA   + +F  QD++ +S+ +  M +D+  LM+ +A +    LR+F  +ELSN  WAY ++  R R+F  A   +A+  L  P  +  E+AN+AWAL V+   DV L  E+   A A  G   L E   +QLYQVY L     PE    +    L+A++  W  ++ R KR++     V++ L+ + I H  E+E+DIDI +   G                            +ALEVDGPAHF +NT  P+GH ++K R L  MG+ V+S+P  E+D IP+WSSME KRYLQRK
Sbjct:  331 LTPQDLAMLSWGFSSLSQ-ECLPCQPAAYRALDVLAKAARECVGNFRPQDVSMVSLALARMSWDDPRLMKAMASRTTETLRAFKPQELSNTAWAYARLHVRDRRFWSALQKQAKRMLDGPGMSAQEIANLAWALAVMGEADVELLEELLRSAQAQRGDFTLIES--HQLYQVYLLWGKDMPELWKELDGEFLMALKRRWTDNQQRTKRSSCSHLEVSQTLDLMQISHENESEHDIDIEVVGVGLASEDWDFRSFSAGTGPNPADPAEVRLKLALEVDGPAHFTKNTARPLGHMVLKHRTLSKMGWTVVSIPFLEWDPIPFWSSMEKKRYLQRK 660          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|873239606|emb|CEL94246.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 204.142 bits (518), Expect = 6.997e-51
Identity = 120/356 (33.71%), Postives = 195/356 (54.78%), Query Frame = 0
Query:  459 DIAMIAWAFGKIAALDW-------NAMGPHVDMLCAVLASAALRHIRD----------FSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRS--FSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRLPYFTPTELANVAWALTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLH-----IRHRVEAENDIDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPR---GKKTRFD 787
            D++M+AW F  +   D+       NA    +D + A + +     ++                LA L++      YD+  LM  VA  + R L    F+ RE++N+ ++YGK+  + R    A    A+ +L  F+  EL+N+ + + + E YD  LFR+++A+A  +E    +    L QLYQ + +L  + P+AV+ V    L  +  AW   K R K +++   A++  L +L      + H  EAE+DIDI L +  +A+EV GP HF  NT  P+GHT++K ++L+L G+ V+ +P++E++RIP+WS+ME KRYLQRK +    L Y++ D+S +KPY P    GK +RFD
Sbjct:  930 DLSMLAWGFATLVKQDYWSDSKLKNATVALMDAVSAAMQTEIRACMQQQARGRGSSCRLKGSHLAMLAIACARSGYDDPALMSRVAELSIRWLDEGRFTPREVANLAYSYGKLSLKCRPVAEAIGRRAKRQLKEFSSQELSNMLFGMVISETYDAQLFRDIYAQAQ-NELPDAISWLALLQLYQAWVVLSAECPDAVSEVDDAFLARLHAAWDRVKKRPKESSEHHRAISACLMTLSEFRCCVNHVTEAEHDIDIALLDRRLAVEVHGPTHFACNTRRPLGHTLLKNKMLQLQGWGVVQIPYWEWERIPHWSTMEKKRYLQRKLEITAPLKYSNRDTSYYKPYIPHAPAGKLSRFD 1284          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|219110565|ref|XP_002177034.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411569|gb|EEC51497.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 157.918 bits (398), Expect = 3.823e-36
Identity = 119/401 (29.68%), Postives = 194/401 (48.38%), Query Frame = 0
Query:  457 AKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRH-----------IRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRS------------FSHRELSNIIWAYGKVFRRPRK------FVLAAAAE--------ARLRLPYFTPTELANVAWALTVLEVYD----VGLFREVFARAAAD-EGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDID--ILLPEHGV---------------ALEVDGPAHFLR-----NTGHP-----MGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHK-PYPPRGKKTRFD 787
            ++D+A I W+ G + A ++       +++ AV +S  L H           +RD+S  D+ ++++ +   + +   L++    +A  +L S            F   EL  ++WA  ++  +  +      F  AA  E          L        E AN+AWALTVL+       + L   +FA AAA  E   ++Q    +QL+Q Y LL+  +P  V  V       + + W++ K R K ++ R  ++++ L+ + I H+ E + DID  I+L +  V               A+E DGP HF R     N   P     +GHT++K RLL+  G+ V+ VP++EFD+IPYW+SME +RYLQR  +T   L ++ +D S +K P P R  +TRFD
Sbjct:  525 SRDLAQIIWSLGILQADNFRLADGLTNVVAAVQSSQKLNHDDDYSPNSDGPMRDWSCTDIVQVALSLAHARLEELPLLRAAYAEALHRLESTTSIRSRTIRAHFQSWELGILLWAQARLHLKASEGQVFECFASAAVDELVAAMDDAGSLANIGIGSQEQANIAWALTVLQEDQSPNAIRLLSTIFADAAAACEKDGIIQLEHAHQLWQAYFLLQESSPPVVANVSHWFRDYLRDKWSLEKSRTKLSSARHRSLSQALDLMGIAHKNEHDEDIDVAIVLKKSAVWTHQTKRDGTEGVKLAVEFDGPNHFTRQRKPSNGSKPDVPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPYWASMERQRYLQRLLKTHANLRFSQVDVSEYKAPVPNR--ETRFD 923          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|223999221|ref|XP_002289283.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974491|gb|EED92820.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 153.295 bits (386), Expect = 1.063e-34
Identity = 120/412 (29.13%), Postives = 202/412 (49.03%), Query Frame = 0
Query:  458 KDIAMIAWAFGKIAALDWNAMGPHVDMLCAV-------LASAALRH--IRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRS-----FSHRELSNIIWA---------YGKVFRRPRKFVLAAA--------------AEARLRLPYFTPT------ELANVAWALTVLEVYD---VGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDID--ILLPEHG------------------VALEVDGPAHF--LRNTGHPM--------------GHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787
            +D+  IAWA G + + + +     V ++ AV         S+  RH  I+ +   DL +++  +   + DN +++  +  ++  +++S     FS  E+S ++WA         YG VF+   +F  AAA              ++ RL  P   P       E AN+AW+LTVL  YD   V L + +   AA+  G  ++Q    +QL+Q Y LL    P AV  V       +E+ W I K+R K+++ R   +++ LE + + HR E + D+D  I+L E                    VA+E DGP HF  + +TG  +              GHT++K RLL+  G+ V+ +P++E+D+IP ++SME +RYLQR  +T E + ++ +D S ++   P+ + +RFD
Sbjct:  431 RDVVQIAWALGTMESDNASVGDALVYLVDAVNEYWIADSNSSNERHRQIKSWKCADLVQMATALSHGRLDNQSVLTAIYEESLERIQSSSPGKFSTSEISILLWAQARLYLTSKYGSVFQ---EFTGAAARTLMQQMKGKANQHSDERLLPPATLPKMGLRSQEQANLAWSLTVLGHYDSDVVALLQNI-VHAASSSGDGVIQLEHAHQLWQSYFLLSEDCPAAVEFVPAEFSQFLEKKWNIEKNRGKQSSSRHRTISQTLELMRVAHRNEYDEDVDVAIVLQEDSSWTHTAQKDLDNQEGRVKVAVEFDGPFHFTVMASTGKDLTMIENGVKIAPRVLGHTVLKYRLLKKKGWAVVRIPYYEWDKIPSFASMERQRYLQRALKTHETISFSGVDVSQYQAM-PQTRHSRFD 837          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|1210525436|dbj|GAX15779.1| (hypothetical protein FisN_3Lh221 [Fistulifera solaris])

HSP 1 Score: 145.976 bits (367), Expect = 1.718e-33
Identity = 118/437 (27.00%), Postives = 206/437 (47.14%), Query Frame = 0
Query:  420 AGAGWAAGLPGPSGRKWLVAPMVSL-LEATLQVEADLQAK----DIAMIAWAFGKIAALDWNAMGPHVDMLCAV----LASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLR--------------SFSHRELSNIIWAYGKVF---RRPRKFVL-----------AAAAEARLRLPYFTPTELANVAWALTVLEVY----DVGLFREVFARAAAD---EGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDID--ILLPEHG----------------VALEVDGPAHFLRNTG-------HPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787
            A   WA    G S   +    M+ +  EAT ++      K    D+A + W+ G + A ++      ++ + AV    + +   R  RD+S  D+ ++++ +   + D++ L++ +  +A ++L               SF   ELS ++W+  ++     + +++ L           + + +A +        E AN+ W+LTVLE Y       L  + F  AA+    EG   L+    +QL+Q   +L  +  E V+ V      A+ + W   K R K ++ R  +++ +L  + + H  E + DID  I+L                    VA+E DGP HF R+TG         +GHT +K R+L+  G+ V+ VP++EFD+IP+W+SME +RYLQR  +T   + +++LD S +K  P   +KTRFD
Sbjct:   72 ANLAWAFASHGRSCSSYSQELMLQIAYEATRRLRQKTAGKPLSRDVAQLIWSLGTLQADNFRLADGLIEFINAVNSDFMDATKNRPFRDWSCADIVQVALSLAHTRLDDSFLLENLYREARQRLSPGFLHTKGTDGRRMSFLPWELSILLWSQARLHLTGAQSKEYDLFTKVAVKTLYDSISNKASMESLGIGAQEQANIVWSLTVLEEYRSHESKALLNDFFRDAASACTVEGTIQLEHA--HQLWQALYILDGECQECVSSVPSWFREALRDKWLAEKSRSKTSSLRHKSISDLLRLMGVAHVNEHDEDIDVAIILKSQASWTHETDVMCGTAGMKVAVEFDGPTHFARSTGCHNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEYKT-PISDRKTRFD 505          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|1072236147|gb|OEU20875.1| (hypothetical protein FRACYDRAFT_167272, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 144.436 bits (363), Expect = 3.557e-32
Identity = 116/424 (27.36%), Postives = 192/424 (45.28%), Query Frame = 0
Query:  457 AKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAAL-----------RHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKL----------------RSFSHRELSNIIWAYGKVFRRPRK-------------FVLAAAAEARLRLPY--FTPTELANVAWALTVLEVYD----VGLFREVFARAAAD-EGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDID---ILLP-----------------------EH-GVALEVDGPAHFLR---NTGHP----------------MGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787
             +DI+ + W  G + A ++      V ++ ++ A+  L           R +R +S  DL + +V +   + D   L+  V  +   +L                R+F   E S ++WA  +++   ++             F L A  E R         P E AN+ W+L  LE Y     + L   +FA AA   +  R +Q    +QL+Q Y +L    PEAV  + +  +  ++  W+I K R+K+++ R  +++  L+ + + H  E + DID   IL P                       +H  VA+E DGP HF R   N   P                +GHT++K RLL+  G+ V+ VP++EFD+IP+W+SME +RYLQRK +T   + ++++D S +K   P   K+RFD
Sbjct:  282 VRDISQLLWTLGTLQADNFRLGDGLVVLVESLSANLRLGTKTGSRFVQGRPLRSWSCADLVQTAVALAHARIDEKLLLTAVYEEGNYRLMEERTSRNGRLSGDDRRTFHPWEASVLLWAQARLYLTEQEGVEFDEFTEDAPLFFLKALREKRGSFTECRIGPQEQANIVWSLVTLEKYHSTEAIILIDLIFAEAARSCKKNRSIQLEHAHQLWQAYFMLEEDCPEAVKRIPKWFVTYLKGKWSIEKARDKKSSARHRSLSSTLQLMGVDHINEHDEDIDVAIILQPNAQWVHETDMDDEITDSVIDGEEDHVSVAVEFDGPNHFTRVRINDDEPPAAGAFPPSRPDPPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPFWASMERQRYLQRKLKTHANINFSEVDVSEYKELTP-DFKSRFD 704          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|1210525104|dbj|GAX16296.1| (hypothetical protein FisN_3Hh221 [Fistulifera solaris])

HSP 1 Score: 140.969 bits (354), Expect = 3.741e-31
Identity = 107/395 (27.09%), Postives = 185/395 (46.84%), Query Frame = 0
Query:  457 AKDIAMIAWAFGKIAALDWNAMGPHVDMLCAV----LASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLR--------------SFSHRELSNIIWAYGKV------FRRPRKFVLAAAA--------EARLRLPYFTPTELANVAWALTVLEVY----DVGLFREVF---ARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDID--ILLPEHG----------------VALEVDGPAHFLRNTG-------HPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787
            ++D+A + W+ G + A ++      +D + AV    + +   R    +S  D+ ++++ +   + D++ L++ +  +A ++L               SF   ELS ++W+  ++       +    F   A           A +        E AN+ W+LTVLE Y       L  + F   A A   EG   L+    +QL+Q   +L  +  E V+ V      A+ + W   K R K ++ R  +++ +L  + + H  E + DID  I+L                    VA+E DGP HF R+TG         +GHT +K R+L+  G+ V+ VP++EFD+IP+W+SME +RYLQR  +T   + +++LD S +K  P   +KTR+D
Sbjct:  262 SRDVAQLIWSLGTLQADNFRLADGLIDFINAVNSDFMDATKDRPFSGWSCADIVQVALSLAHTRLDDSFLLENLYREARKRLSPGFLHTKGTDGRRMSFLPWELSILLWSQARLHLTGAQLKEYSLFTKVAVKTLYDSIKNNASMESLGIGAQEQANIVWSLTVLEEYRSHESKALLNDFFRDAATACTVEGTIQLEHA--HQLWQALYILDGECQECVSSVPSWFREALRDKWLAEKSRSKTSSLRHKSISDLLRLMGVAHVNEHDEDIDVAIILKSQASWTHETDFMCDSAGMKVAVEFDGPTHFARSTGSYNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEYKT-PISDRKTRYD 653          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|545367736|ref|XP_005648674.1| (hypothetical protein COCSUDRAFT_47154 [Coccomyxa subellipsoidea C-169] >gi|384250651|gb|EIE24130.1| hypothetical protein COCSUDRAFT_47154 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 124.79 bits (312), Expect = 1.365e-25
Identity = 86/296 (29.05%), Postives = 139/296 (46.96%), Query Frame = 0
Query:  458 KDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEA--RLRLPYFTPTELANVAWALTVLEVYDVGLFREVFAR------AAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAEND-----IDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFD 740
            ++I+   WA+ K+   D          +    A+ A R I +FS Q+LA L+  +  + + +  L+  +A  A   ++  S + +SNI+W Y            A   E   RL    F P +L+N+ W+L + E+    +++ + A+      AA D     L E  L Q+YQ Y L+R+  P+    +   LL A    W +   +  R +     VA+VL    I H +E   +     +DI LPE  +A+EVDGP HF  NT    G  + +++LL+  G+ VISVP F + 
Sbjct:  606 QEISNTVWAYAKLRFYD--------AAVLDTFANEATRRIEEFSQQNLANLAWAMGKLSHFHEGLLDAIAEHATAMVQDLSLQHVSNILWTYASFLHLKPAMTSAFVGEIERRLNTEAFNPQQLSNLLWSLCIAELCSEEIWKGIMAQIETLGIAAKD-----LPEEALTQIYQAYLLMRVDRPQLQLTMPAQLLPAAHHTW-LESCKNVRISALHRDVARVLTEHGIPHNIEHVTEDELFSVDIALPEEKIAIEVDGPHHFTANTLAVTGEMLARQKLLKARGWAVISVPFFRWS 887          

HSP 2 Score: 66.2402 bits (160), Expect = 1.820e-7
Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = 0
Query:  454 DLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYD-NANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRLPYFTPTELANVAWALTVLEVYDVGLF 597
            D  A++++   WA  K+         P   ML A+ A  A + +   +AQ+LA ++     + +     L++ +A +A +KL  FS + +SN+++A+ K+  +P  F+  A+  A   L  FTP  L+N  WAL+ L+  D  LF
Sbjct:  259 DFTARNLSNSLWALAKMG------HNPGEAMLNAMAAEVA-KKLDGCNAQNLANIAWSYATLSHTPGEELLEAIAVKAQKKLAEFSSQNISNLLYAFAKLEHKPSTFLEQASRAAMPILGSFTPQALSNTVWALSKLDTLDEELF 396          
BLAST of EWM30218.1 vs. NCBI_GenBank
Match: gi|545354982|ref|XP_005643311.1| (hypothetical protein COCSUDRAFT_49195 [Coccomyxa subellipsoidea C-169] >gi|384245272|gb|EIE18767.1| hypothetical protein COCSUDRAFT_49195 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 119.783 bits (299), Expect = 3.708e-24
Identity = 138/519 (26.59%), Postives = 224/519 (43.16%), Query Frame = 0
Query:  249 NHVNVCTVLHRCARLA--GT--PRLTPAIEATITQSLLPVVAEVLPACKGRQLCNLAWSLVRLGM-PDEALFDATIDRLQERQGGLLEACNAGELAMVLWAIASAGLTFQHASFFERAAGSLAELAVGLRPREIGLITWAYATWL---GNDLKLNGQQQRGMGAGGLGGWESCDAVEGEAGAGWAAGLPGPSGRKWLVAPMVSLLEAT----LQVEADLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYD-NANLMQLVAYQAARKLRSFSHRELSNIIWAYGKVFRRPRKFVLAAAAEARLRLPY-FTPTELANVAWALTVLEV--YD--VGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLL-----RLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRV-EAEND----IDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEF 739
            + VNV T LHR A+L   GT  P+ +P + +   Q L+     ++P  + + + N  W+   LG  P   L    +DRL     G++        +  LWA A              A   L +L   + P++I   TWA+AT     GN L                  E  + +       WA    G         P   LL+A     +   A  + + I+   W++ K+A   +N     +D    V A  A   +  +++Q++A        ++++  + ++   A Q AR++  FS ++ +N +W + ++F  P   +L A +   LR  + F   ELAN+ W+L +L    +D  V L  ++   A A        + DL+QLYQ Y LL     RL +         GL    E  W        RT+K Q  V+ VL SL + H+  E   D    +DI L    V +EVDGP HF  N+  P+G T+ ++ ++E  G+ V S+P++E+
Sbjct:  148 DEVNVATALHRLAKLQPPGTAGPQ-SPVLRSASFQLLVEASQRLVPRFEAQAVSNTLWAFATLGYHPSGDL----LDRLGHHAAGIVRTFRPQATSNALWAYAKLAYVPCEPFLAAAALQLLTDLPRCV-PQDISNATWAFATLRHHPGNTLMDAAAATAARTMPHFKPQEIANTL-------WAFATLGHD-------PGAILLDAAAGQMVDNIAHFRPQAISNSLWSYSKLA---YNPGHRVLD----VAARRAAGMLHQYTSQEIANTLWAFATLEHNPGSGMLDAAAVQIARRIEQFSPQDTTNSVWCFARLFHYPGAELLQAISLYCLRHWHRFKAQELANMIWSLALLRACSHDTWVALLEKLNTVAEAT-----FDDADLHQLYQAYVLLDPPGLRLPSSSLSEKFPEGLARRAERVWRAGVHPLARTSKLQEDVSAVLWSLGVAHKTNEVTADGLFCVDIALEGGKVVIEVDGPTHFSVNSRRPLGRTVARKLMVEARGHVVRSIPYYEW 634          
The following BLAST results are available for this feature:
BLAST of EWM30218.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112877|gb|EWM30218.1|0.000e+0100.00RAP domain protein [Nannochloropsis gaditana][more]
gi|299472343|emb|CBN77531.1|3.107e-5136.04conserved unknown protein [Ectocarpus siliculosus][more]
gi|873239606|emb|CEL94246.1|6.997e-5133.71unnamed protein product [Vitrella brassicaformis C... [more]
gi|219110565|ref|XP_002177034.1|3.823e-3629.68predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|223999221|ref|XP_002289283.1|1.063e-3429.13predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210525436|dbj|GAX15779.1|1.718e-3327.00hypothetical protein FisN_3Lh221 [Fistulifera sola... [more]
gi|1072236147|gb|OEU20875.1|3.557e-3227.36hypothetical protein FRACYDRAFT_167272, partial [F... [more]
gi|1210525104|dbj|GAX16296.1|3.741e-3127.09hypothetical protein FisN_3Hh221 [Fistulifera sola... [more]
gi|545367736|ref|XP_005648674.1|1.365e-2529.05hypothetical protein COCSUDRAFT_47154 [Coccomyxa s... [more]
gi|545354982|ref|XP_005643311.1|3.708e-2426.59hypothetical protein COCSUDRAFT_49195 [Coccomyxa s... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna440rna440Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications