EWM26280.1, cds4391 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|585108281|gb|EWM26280.1| (cax-interacting protein 4 [Nannochloropsis gaditana]) HSP 1 Score: 426.017 bits (1094), Expect = 1.005e-150 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHLGGNNRAADSESESSDEDSVESAEEVVEARAAAAAAMTSRGDGNGSRKRKQESSSGGSSDSEESEGSSEAEERRERRREREGRRSASVKKRKKESKKRHKKEKMHKKEKKRKKKHSHR 215
MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHLGGNNRAADSESESSDEDSVESAEEVVEARAAAAAAMTSRGDGNGSRKRKQESSSGGSSDSEESEGSSEAEERRERRREREGRRSASVKKRKKESKKRHKKEKMHKKEKKRKKKHSHR
Sbjct: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHLGGNNRAADSESESSDEDSVESAEEVVEARAAAAAAMTSRGDGNGSRKRKQESSSGGSSDSEESEGSSEAEERRERRREREGRRSASVKKRKKESKKRHKKEKMHKKEKKRKKKHSHR 215
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|635368629|emb|CCI43189.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 117.087 bits (292), Expect = 4.337e-29 Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHL 98
MP++ GR++MPHNNRM SS L + MWKN I YDPYA ++ + +ELA +Q +GLM + ++ + T RGAC+KCG +GHLTYQCRNHL
Sbjct: 1 MPSTTGRMRMPHNNRMHSSLTLKMTGMWKNTIGYDPYAASDEGVQD---SELAQDQAKGLMALAKLSNQNT----QSRGACKKCGMIGHLTYQCRNHL 91
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|567993142|gb|ETL43325.1| (hypothetical protein L916_06133 [Phytophthora parasitica]) HSP 1 Score: 117.857 bits (294), Expect = 9.114e-29 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHLGG 100
MPA+AGRV+MPHNNRM SSA L + +WKN I YDPYA + + E +E + EQ +GLM + ++ + + RGAC+KCG +GHLT+QCRNHLGG
Sbjct: 1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGEKQGE--TSETSYEQAKGLMALAKLSNK----SNDVRGACKKCGMVGHLTFQCRNHLGG 94
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|570989562|gb|ETP47765.1| (hypothetical protein F442_06364 [Phytophthora parasitica P10297]) HSP 1 Score: 115.931 bits (289), Expect = 4.985e-28 Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHLGG 100
MPA+AGRV+MPHNNRM SSA L + +W N I YDPYA + + E +E + EQ +GLM + ++ + + RGAC+KCG +GHLT+QCRNHLGG
Sbjct: 1 MPATAGRVRMPHNNRMHSSATLKMTGIWTNTIGYDPYAAEGEKQGE--TSETSYEQAKGLMALAKLSNK----SNDVRGACKKCGMVGHLTFQCRNHLGG 94
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|299470100|emb|CBN78129.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.39 bits (285), Expect = 2.561e-27 Identity = 51/98 (52.04%), Postives = 69/98 (70.41%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHL 98
MPA+AGRV+MPH NR+SSS+AL + +W N I YDPYA E A+A A EQ +GLM + ++ + G +RGAC+KCG++GHLT+QCRNH+
Sbjct: 1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAA-EGGGADAEDEANAFEQAQGLMALAKLSNQ---GVTEQRGACKKCGSVGHLTFQCRNHI 94
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|695063202|ref|XP_009420098.1| (PREDICTED: CAX-interacting protein 4-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 109.768 bits (273), Expect = 3.447e-25 Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYAN-DEDAAAEAA-------AAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHLGGNNRAADSESESSDEDSVESA 120
MPA+AGRV+MP NNR+ SSAAL T +W++ I YDPYA ++D+A E+A AAE A +GL+ + R+ G+ RG+CRKCG +GHLT+QCRN L + A + + D D++++A
Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPANKDSAKESALPGEDGSAAENAYASFQGLLALARVTGS---GSNEARGSCRKCGRVGHLTFQCRNFLSAKDSAVFDKDK--DADAIQAA 123
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|953496876|emb|CEG41185.1| (cax-interacting protein 4 [Plasmopara halstedii]) HSP 1 Score: 108.227 bits (269), Expect = 4.535e-25 Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHL 98
MP +AGR++MPHNNRM SS+ L + +WK+ I YDPYA +++ + +E + EQ +GLM + ++ + + RGAC+KCG +GHLT+QCRN+L
Sbjct: 1 MPTTAGRMRMPHNNRMHSSSTLKMTGIWKDTIGYDPYAAEDE--KQIKTSETSYEQAKGLMALAKLSNK----SSDVRGACKKCGVVGHLTFQCRNYL 92
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|635368630|emb|CCI43190.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 105.916 bits (263), Expect = 8.967e-25 Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 0
Query: 8 VKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHL 98
++MPHNNRM SS L + MWKN I YDPYA ++ ++ ELA +Q +GLM + ++ + T RGAC+KCG +GHLTYQCRNHL
Sbjct: 1 MRMPHNNRMHSSLTLKMTGMWKNTIGYDPYAASDEGVQDS---ELAQDQAKGLMALAKLSNQNT----QSRGACKKCGMIGHLTYQCRNHL 84
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|635368631|emb|CCI43191.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 104.76 bits (260), Expect = 1.707e-24 Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = 0
Query: 10 MPHNNRMSSSAALGTSNMWKNVIKYDPYANDEDAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHL 98
MPHNNRM SS L + MWKN I YDPYA ++ ++ ELA +Q +GLM + ++ + T RGAC+KCG +GHLTYQCRNHL
Sbjct: 1 MPHNNRMHSSLTLKMTGMWKNTIGYDPYAASDEGVQDS---ELAQDQAKGLMALAKLSNQNT----QSRGACKKCGMIGHLTYQCRNHL 82
BLAST of EWM26280.1 vs. NCBI_GenBank
Match: gi|302772156|ref|XP_002969496.1| (hypothetical protein SELMODRAFT_440732 [Selaginella moellendorffii] >gi|300162972|gb|EFJ29584.1| hypothetical protein SELMODRAFT_440732 [Selaginella moellendorffii]) HSP 1 Score: 105.916 bits (263), Expect = 3.342e-24 Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 0
Query: 1 MPASAGRVKMPHNNRMSSSAALGTSNMWKNVIKYDPYANDE------DAAAEAAAAELAAEQQRGLMDVVRIKARETLGTESKRGACRKCGNMGHLTYQCRNHL 98
MPA+AGRV+MP NNR+ SSAAL T +W++ I YDPYA D + AA A E A + +GL+ + +I++ + ++ RGACR+C +GHL +QCRN L
Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPDRKDPSGGERAAPVPAGENAYDSFQGLLALAKIQSGQVSSSDEPRGACRRCKRVGHLPFQCRNFL 104 The following BLAST results are available for this feature:
BLAST of EWM26280.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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